RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 RHEBQ15382 184 aa9.76□□□□□ -0.85
COL18A1-205ENST00000423214 C2orf82Q6UX34 121 aa9.76□□□□□ -0.85
COL18A1-205ENST00000423214 TOMM6Q96B49 74 aa9.76□□□□□ -0.85
COL18A1-205ENST00000423214 MRPL18Q9H0U6 180 aaKnown RBP9.76□□□□□ -0.85
COL18A1-205ENST00000423214 G0S2P27469 103 aa9.75□□□□□ -0.85
COL18A1-205ENST00000423214 SCGB3A1Q96QR1 104 aa9.75□□□□□ -0.85
COL18A1-205ENST00000423214 NPSP0C0P6 89 aa9.74□□□□□ -0.85
COL18A1-205ENST00000423214 LINC01561Q8N1V8 128 aa9.74□□□□□ -0.85
COL18A1-205ENST00000423214 TOMM7Q9P0U1 55 aa9.74□□□□□ -0.85
COL18A1-205ENST00000423214 APOC3P02656 99 aa9.73□□□□□ -0.85
COL18A1-205ENST00000423214 RPL13AP40429 203 aaKnown RBP9.73□□□□□ -0.85
COL18A1-205ENST00000423214 CKS1BP61024 79 aa9.73□□□□□ -0.85
COL18A1-205ENST00000423214 COX19Q49B96 90 aa9.73□□□□□ -0.85
COL18A1-205ENST00000423214 C9orf129Q5T035 196 aaKnown RBP9.73□□□□□ -0.85
COL18A1-205ENST00000423214 ERASQ7Z444 233 aa9.73□□□□□ -0.85
COL18A1-205ENST00000423214 KRTAP7-1Q8IUC3 87 aa9.73□□□□□ -0.85
COL18A1-205ENST00000423214 TIMM17AQ99595 171 aa9.73□□□□□ -0.85
COL18A1-205ENST00000423214 KRTAP1-4P0C5Y4 121 aa9.72□□□□□ -0.85
COL18A1-205ENST00000423214 PAPPA-AS1Q5QFB9 102 aa9.72□□□□□ -0.85
COL18A1-205ENST00000423214 FAM19A3Q7Z5A8 133 aa9.72□□□□□ -0.85
COL18A1-205ENST00000423214 CDKN2A-AS1Q9UH64 79 aa9.72□□□□□ -0.85
COL18A1-205ENST00000423214 LINC01546A6NGU7 62 aa9.71□□□□□ -0.86
COL18A1-205ENST00000423214 FA2HQ7L5A8 372 aa9.71□□□□□ -0.86
COL18A1-205ENST00000423214 GEMIN7Q9H840 131 aaKnown RBP9.71□□□□□ -0.86
COL18A1-205ENST00000423214 HERVK_113P63121 156 aa9.7□□□□□ -0.86
COL18A1-205ENST00000423214 C6orf226Q5I0X4 101 aa9.7□□□□□ -0.86
COL18A1-205ENST00000423214 LINC00469Q8N7U9 141 aa9.7□□□□□ -0.86
COL18A1-205ENST00000423214 SMCO4Q9NRQ5 59 aa9.7□□□□□ -0.86
COL18A1-205ENST00000423214 TRAPPC1Q9Y5R8 145 aa9.7□□□□□ -0.86
COL18A1-205ENST00000423214 SEC11AP67812 179 aa9.69□□□□□ -0.86
COL18A1-205ENST00000423214 PRR4Q16378 134 aa9.69□□□□□ -0.86
COL18A1-205ENST00000423214 Q8IZM0 81 aa9.69□□□□□ -0.86
COL18A1-205ENST00000423214 NUPR1O60356 82 aa9.68□□□□□ -0.86
COL18A1-205ENST00000423214 SNAPINO95295 136 aa9.67□□□□□ -0.86
COL18A1-205ENST00000423214 CST9LQ9H4G1 147 aa9.67□□□□□ -0.86
COL18A1-205ENST00000423214 ZNF861PO60384 105 aa9.66□□□□□ -0.86
COL18A1-205ENST00000423214 NDUFA5Q16718 116 aa9.66□□□□□ -0.86
COL18A1-205ENST00000423214 LBHQ53QV2 105 aaPredicted RBP9.66□□□□□ -0.86
COL18A1-205ENST00000423214 SVBPQ8N300 66 aa9.66□□□□□ -0.86
COL18A1-205ENST00000423214 URB1-AS1Q96HZ7 61 aa9.66□□□□□ -0.86
COL18A1-205ENST00000423214 XAGE1AQ9HD64 81 aa9.66□□□□□ -0.86
COL18A1-205ENST00000423214 F8VRH5 84 aa9.65□□□□□ -0.86
COL18A1-205ENST00000423214 SLC7A5P1Q8MH63 180 aa9.65□□□□□ -0.86
COL18A1-205ENST00000423214 C18orf32Q8TCD1 76 aa9.65□□□□□ -0.86
COL18A1-205ENST00000423214 C22orf24Q9Y442 160 aa9.65□□□□□ -0.86
COL18A1-205ENST00000423214 TINCRA0A1B0GVN0 87 aa9.64□□□□□ -0.87
COL18A1-205ENST00000423214 LINC01549A6NIU2 74 aa9.64□□□□□ -0.87
COL18A1-205ENST00000423214 LINC00614P0C842 121 aa9.64□□□□□ -0.87
COL18A1-205ENST00000423214 CXCL5P42830 114 aa9.64□□□□□ -0.87
COL18A1-205ENST00000423214 PMVKQ15126 192 aa9.64□□□□□ -0.87
COL18A1-205ENST00000423214 A0A096LNJ9 63 aa9.63□□□□□ -0.87
COL18A1-205ENST00000423214 SMIM1B2RUZ4 78 aa9.63□□□□□ -0.87
COL18A1-205ENST00000423214 NDUFA6P56556 154 aa9.63□□□□□ -0.87
COL18A1-205ENST00000423214 PMCHL1Q16048 86 aa9.63□□□□□ -0.87
COL18A1-205ENST00000423214 SPINK8P0C7L1 97 aa9.62□□□□□ -0.87
COL18A1-205ENST00000423214 RPL28P46779 137 aaKnown RBP9.62□□□□□ -0.87
COL18A1-205ENST00000423214 MRPL55Q7Z7F7 128 aaKnown RBP9.62□□□□□ -0.87
COL18A1-205ENST00000423214 TP73-AS1Q9UF72 201 aa9.62□□□□□ -0.87
COL18A1-205ENST00000423214 IGLV5-45A0A087WSX0 123 aa9.61□□□□□ -0.87
COL18A1-205ENST00000423214 PDZD11Q5EBL8 140 aa9.61□□□□□ -0.87
COL18A1-205ENST00000423214 COX7B2Q8TF08 81 aa9.61□□□□□ -0.87
COL18A1-205ENST00000423214 BCE1O60756 84 aa9.59□□□□□ -0.87
COL18A1-205ENST00000423214 TSPAN13O95857 204 aa9.59□□□□□ -0.87
COL18A1-205ENST00000423214 HBDP02042 147 aa9.59□□□□□ -0.87
COL18A1-205ENST00000423214 YPEL4Q96NS1 127 aa9.59□□□□□ -0.87
COL18A1-205ENST00000423214 RAB5BP61020 215 aa9.57□□□□□ -0.88
COL18A1-205ENST00000423214 A0A0U1RQV1 116 aa9.56□□□□□ -0.88
COL18A1-205ENST00000423214 RPL37AP8A6NKH3 93 aa9.56□□□□□ -0.88
COL18A1-205ENST00000423214 H3BRM9 83 aa9.56□□□□□ -0.88
COL18A1-205ENST00000423214 IGLC3P0DOY3 106 aa9.56□□□□□ -0.88
COL18A1-205ENST00000423214 CRYGAP11844 174 aa9.56□□□□□ -0.88
COL18A1-205ENST00000423214 TYMSOSQ8TAI1 123 aa9.56□□□□□ -0.88
COL18A1-205ENST00000423214 A0A087X002 238 aa9.55□□□□□ -0.88
COL18A1-205ENST00000423214 GAGE10A6NGK3 116 aa9.55□□□□□ -0.88
COL18A1-205ENST00000423214 BAGE3Q86Y29 109 aa9.55□□□□□ -0.88
COL18A1-205ENST00000423214 CBLN2Q8IUK8 224 aa9.55□□□□□ -0.88
COL18A1-205ENST00000423214 NKAPP1Q8N9T2 125 aa9.55□□□□□ -0.88
COL18A1-205ENST00000423214 LINC00167Q96N53 147 aa9.55□□□□□ -0.88
COL18A1-205ENST00000423214 ZNF22P17026 224 aaPredicted RBP9.54□□□□□ -0.88
COL18A1-205ENST00000423214 ATP5LO75964 103 aa9.53□□□□□ -0.88
COL18A1-205ENST00000423214 UBE2AP49459 152 aa9.53□□□□□ -0.88
COL18A1-205ENST00000423214 C11orf86A6NJI1 115 aa9.52□□□□□ -0.89
COL18A1-205ENST00000423214 MUC2Q02817 5179 aa9.51□□□□□ -0.89
COL18A1-205ENST00000423214 IGLV5-39A0A0G2JS06 123 aa9.51□□□□□ -0.89
COL18A1-205ENST00000423214 IGLV5-37A0A075B6J1 123 aa9.5□□□□□ -0.89
COL18A1-205ENST00000423214 PFN2P35080 140 aa9.5□□□□□ -0.89
COL18A1-205ENST00000423214 TMEM170BQ5T4T1 132 aa9.5□□□□□ -0.89
COL18A1-205ENST00000423214 CHCHD1Q96BP2 118 aaKnown RBP9.5□□□□□ -0.89
COL18A1-205ENST00000423214 ZNF625Q96I27 306 aaPredicted RBP9.49□□□□□ -0.89
COL18A1-205ENST00000423214 CHTOPQ9Y3Y2 248 aaKnown RBP9.49□□□□□ -0.89
COL18A1-205ENST00000423214 IGKV2-28A0A075B6P5 120 aa9.48□□□□□ -0.89
COL18A1-205ENST00000423214 IGKV2D-28P01615 120 aa9.48□□□□□ -0.89
COL18A1-205ENST00000423214 TRGC2P03986 189 aa9.48□□□□□ -0.89
COL18A1-205ENST00000423214 FAM19A2Q8N3H0 131 aa9.48□□□□□ -0.89
COL18A1-205ENST00000423214 IFI27L1Q96BM0 104 aa9.48□□□□□ -0.89
COL18A1-205ENST00000423214 ANAPC11Q9NYG5 84 aa9.48□□□□□ -0.89
COL18A1-205ENST00000423214 HSBP1O75506 76 aa9.46□□□□□ -0.9
COL18A1-205ENST00000423214 KRTAP13-1Q8IUC0 172 aa9.46□□□□□ -0.9
COL18A1-205ENST00000423214 SCO1O75880 301 aa9.45□□□□□ -0.9
COL18A1-205ENST00000423214 FAM229BQ4G0N7 80 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms