RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 TRAPPC1Q9Y5R8 145 aa6.31□□□□□ -1.4
HDLBP-206ENST00000417540 SNAPINO95295 136 aa6.3□□□□□ -1.4
HDLBP-206ENST00000417540 SERTAD4-AS1Q5TG53 156 aa6.3□□□□□ -1.4
HDLBP-206ENST00000417540 PSORS1C2Q9UIG4 136 aa6.3□□□□□ -1.4
HDLBP-206ENST00000417540 IGLV5-45A0A087WSX0 123 aa6.29□□□□□ -1.4
HDLBP-206ENST00000417540 M0QXV9 152 aa6.29□□□□□ -1.4
HDLBP-206ENST00000417540 TLX1NBP0CAT3 122 aa6.29□□□□□ -1.4
HDLBP-206ENST00000417540 HERVK_113P63121 156 aa6.29□□□□□ -1.4
HDLBP-206ENST00000417540 RNF151Q2KHN1 245 aa6.29□□□□□ -1.4
HDLBP-206ENST00000417540 ERASQ7Z444 233 aa6.29□□□□□ -1.4
HDLBP-206ENST00000417540 Q8IZM0 81 aa6.29□□□□□ -1.4
HDLBP-206ENST00000417540 LINC00474Q9P2X8 69 aa6.29□□□□□ -1.4
HDLBP-206ENST00000417540 OXTP01178 125 aa6.28□□□□□ -1.4
HDLBP-206ENST00000417540 NPSP0C0P6 89 aa6.28□□□□□ -1.4
HDLBP-206ENST00000417540 ZNF22P17026 224 aaPredicted RBP6.28□□□□□ -1.4
HDLBP-206ENST00000417540 LINC00310P59036 64 aa6.28□□□□□ -1.4
HDLBP-206ENST00000417540 NDUFA5Q16718 116 aa6.28□□□□□ -1.4
HDLBP-206ENST00000417540 PACRGQ96M98 296 aaPredicted RBP6.28□□□□□ -1.4
HDLBP-206ENST00000417540 CST9LQ9H4G1 147 aa6.28□□□□□ -1.4
HDLBP-206ENST00000417540 GEMIN7Q9H840 131 aaKnown RBP6.28□□□□□ -1.4
HDLBP-206ENST00000417540 XAGE1AQ9HD64 81 aa6.28□□□□□ -1.4
HDLBP-206ENST00000417540 PKIGQ9Y2B9 76 aa6.28□□□□□ -1.4
HDLBP-206ENST00000417540 TRBV30A0A0K0K1B3 111 aa6.27□□□□□ -1.41
HDLBP-206ENST00000417540 TINCRA0A1B0GVN0 87 aa6.27□□□□□ -1.41
HDLBP-206ENST00000417540 NDUFC2-KCTD14E9PQ53 114 aa6.27□□□□□ -1.41
HDLBP-206ENST00000417540 HBDP02042 147 aa6.27□□□□□ -1.41
HDLBP-206ENST00000417540 COX19Q49B96 90 aa6.27□□□□□ -1.41
HDLBP-206ENST00000417540 PDZD11Q5EBL8 140 aa6.27□□□□□ -1.41
HDLBP-206ENST00000417540 LINC01561Q8N1V8 128 aa6.27□□□□□ -1.41
HDLBP-206ENST00000417540 C11orf86A6NJI1 115 aa6.26□□□□□ -1.41
HDLBP-206ENST00000417540 PRSS2P07478 247 aa6.26□□□□□ -1.41
HDLBP-206ENST00000417540 IGLC3P0DOY3 106 aa6.26□□□□□ -1.41
HDLBP-206ENST00000417540 PMVKQ15126 192 aa6.26□□□□□ -1.41
HDLBP-206ENST00000417540 C1orf137Q5JT78 98 aa6.26□□□□□ -1.41
HDLBP-206ENST00000417540 SCO1O75880 301 aa6.25□□□□□ -1.41
HDLBP-206ENST00000417540 NDUFA6P56556 154 aa6.25□□□□□ -1.41
HDLBP-206ENST00000417540 COX7B2Q8TF08 81 aa6.25□□□□□ -1.41
HDLBP-206ENST00000417540 F8VRH5 84 aa6.24□□□□□ -1.41
HDLBP-206ENST00000417540 F8WDY8 70 aa6.24□□□□□ -1.41
HDLBP-206ENST00000417540 LINC00614P0C842 121 aa6.24□□□□□ -1.41
HDLBP-206ENST00000417540 CKS1BP61024 79 aa6.24□□□□□ -1.41
HDLBP-206ENST00000417540 PAPPA-AS1Q5QFB9 102 aa6.24□□□□□ -1.41
HDLBP-206ENST00000417540 SRSF9Q13242 221 aaKnown RBP eCLIP6.23□□□□□ -1.413e-10■■■■■ 32.5
HDLBP-206ENST00000417540 FAM19A2Q8N3H0 131 aa6.23□□□□□ -1.41
HDLBP-206ENST00000417540 Q8NDZ9 215 aa6.23□□□□□ -1.41
HDLBP-206ENST00000417540 PLA2G2DQ9UNK4 145 aa6.23□□□□□ -1.41
HDLBP-206ENST00000417540 IGLV5-39A0A0G2JS06 123 aa6.22□□□□□ -1.41
HDLBP-206ENST00000417540 TRGC2P03986 189 aa6.22□□□□□ -1.41
HDLBP-206ENST00000417540 SEC11AP67812 179 aa6.22□□□□□ -1.41
HDLBP-206ENST00000417540 C6orf226Q5I0X4 101 aa6.22□□□□□ -1.41
HDLBP-206ENST00000417540 UBE2BP63146 152 aa6.21□□□□□ -1.42
HDLBP-206ENST00000417540 H0Y8G0 127 aa6.2□□□□□ -1.42
HDLBP-206ENST00000417540 NUPR1O60356 82 aa6.2□□□□□ -1.42
HDLBP-206ENST00000417540 SERF1AO75920 110 aa6.2□□□□□ -1.42
HDLBP-206ENST00000417540 IGLV7-43P04211 117 aa6.2□□□□□ -1.42
HDLBP-206ENST00000417540 G0S2P27469 103 aa6.2□□□□□ -1.42
HDLBP-206ENST00000417540 CXCL5P42830 114 aa6.2□□□□□ -1.42
HDLBP-206ENST00000417540 RAB5BP61020 215 aa6.2□□□□□ -1.42
HDLBP-206ENST00000417540 SPINK6Q6UWN8 80 aa6.2□□□□□ -1.42
HDLBP-206ENST00000417540 BAGE3Q86Y29 109 aa6.2□□□□□ -1.42
HDLBP-206ENST00000417540 ZNF625Q96I27 306 aaPredicted RBP6.2□□□□□ -1.42
HDLBP-206ENST00000417540 LINC01600Q96MT4 127 aa6.2□□□□□ -1.42
HDLBP-206ENST00000417540 GAGE10A6NGK3 116 aa6.19□□□□□ -1.42
HDLBP-206ENST00000417540 TSPEAR-AS2P59090 65 aa6.19□□□□□ -1.42
HDLBP-206ENST00000417540 TMEM170BQ5T4T1 132 aa6.19□□□□□ -1.42
HDLBP-206ENST00000417540 C22orf24Q9Y442 160 aa6.19□□□□□ -1.42
HDLBP-206ENST00000417540 H3BRM9 83 aa6.18□□□□□ -1.42
HDLBP-206ENST00000417540 KRTAP1-4P0C5Y4 121 aa6.18□□□□□ -1.42
HDLBP-206ENST00000417540 PFN2P35080 140 aa6.18□□□□□ -1.42
HDLBP-206ENST00000417540 IFI27L1Q96BM0 104 aa6.18□□□□□ -1.42
HDLBP-206ENST00000417540 CHCHD1Q96BP2 118 aaKnown RBP6.18□□□□□ -1.42
HDLBP-206ENST00000417540 CHTOPQ9Y3Y2 248 aaKnown RBP6.18□□□□□ -1.42
HDLBP-206ENST00000417540 LINC01549A6NIU2 74 aa6.17□□□□□ -1.42
HDLBP-206ENST00000417540 RPL37AP8A6NKH3 93 aa6.17□□□□□ -1.42
HDLBP-206ENST00000417540 COLCA2A8K830 154 aa6.17□□□□□ -1.42
HDLBP-206ENST00000417540 H0Y9J4 135 aa6.17□□□□□ -1.42
HDLBP-206ENST00000417540 ATP5LO75964 103 aa6.17□□□□□ -1.42
HDLBP-206ENST00000417540 A0A0U1RRA0 63 aa6.16□□□□□ -1.42
HDLBP-206ENST00000417540 TMEM223A0PJW6 202 aa6.16□□□□□ -1.42
HDLBP-206ENST00000417540 HSBP1O75506 76 aa6.16□□□□□ -1.42
HDLBP-206ENST00000417540 MRPL55Q7Z7F7 128 aaKnown RBP6.16□□□□□ -1.42
HDLBP-206ENST00000417540 PRR26Q8N8Z3 221 aa6.16□□□□□ -1.42
HDLBP-206ENST00000417540 PMCHL2Q9BQD1 86 aa6.16□□□□□ -1.42
HDLBP-206ENST00000417540 ERG28Q9UKR5 140 aa6.16□□□□□ -1.42
HDLBP-206ENST00000417540 VPREB1P12018 145 aa6.15□□□□□ -1.42
HDLBP-206ENST00000417540 KRTAP10-8P60410 259 aa6.15□□□□□ -1.42
HDLBP-206ENST00000417540 REG3GQ6UW15 175 aa6.15□□□□□ -1.42
HDLBP-206ENST00000417540 IGKV2-28A0A075B6P5 120 aa6.14□□□□□ -1.43
HDLBP-206ENST00000417540 TRAV12-1A0A0B4J245 112 aa6.14□□□□□ -1.43
HDLBP-206ENST00000417540 IGKV2D-28P01615 120 aa6.14□□□□□ -1.43
HDLBP-206ENST00000417540 LINC00167Q96N53 147 aa6.14□□□□□ -1.43
HDLBP-206ENST00000417540 SND1-IT1Q9HBX3 110 aa6.14□□□□□ -1.43
HDLBP-206ENST00000417540 MUC17Q685J3 4493 aa6.13□□□□□ -1.43
HDLBP-206ENST00000417540 IGLV5-37A0A075B6J1 123 aa6.13□□□□□ -1.43
HDLBP-206ENST00000417540 TMEM238C9JI98 176 aa6.12□□□□□ -1.43
HDLBP-206ENST00000417540 FABP4P15090 132 aa6.12□□□□□ -1.43
HDLBP-206ENST00000417540 DIRC1Q969H9 104 aa6.12□□□□□ -1.43
HDLBP-206ENST00000417540 TP73-AS1Q9UF72 201 aa6.12□□□□□ -1.43
HDLBP-206ENST00000417540 LEPROTL1O95214 131 aa6.11□□□□□ -1.43
HDLBP-206ENST00000417540 SMIM13P0DJ93 91 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms