RNA–Protein interactions for RNA: ENST00000415548.1

CCT3-208, Transcript of chaperonin containing TCP1 subunit 3, human

TSL 3

Gene CCT3, Length 513 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCT3-208	ENST00000415548	C18orf32	Q8TCD1	76 aa		5.24	□□□□□ -1.57
CCT3-208	ENST00000415548	URB1-AS1	Q96HZ7	61 aa		5.24	□□□□□ -1.57
CCT3-208	ENST00000415548	CDKN2A-AS1	Q9UH64	79 aa		5.24	□□□□□ -1.57
CCT3-208	ENST00000415548	LINC01549	A6NIU2	74 aa		5.23	□□□□□ -1.57
CCT3-208	ENST00000415548	SEC11A	P67812	179 aa		5.23	□□□□□ -1.57
CCT3-208	ENST00000415548	PRR3	P79522	188 aa	Known RBP	5.23	□□□□□ -1.57
CCT3-208	ENST00000415548	C9orf116	Q5BN46	136 aa	Predicted RBP	5.23	□□□□□ -1.57
CCT3-208	ENST00000415548		Q6ZRP5	223 aa		5.23	□□□□□ -1.57
CCT3-208	ENST00000415548	YPEL4	Q96NS1	127 aa		5.23	□□□□□ -1.57
CCT3-208	ENST00000415548	CST9L	Q9H4G1	147 aa		5.23	□□□□□ -1.57
CCT3-208	ENST00000415548	GEMIN7	Q9H840	131 aa	Known RBP	5.23	□□□□□ -1.57
CCT3-208	ENST00000415548	TOMM7	Q9P0U1	55 aa		5.23	□□□□□ -1.57
CCT3-208	ENST00000415548	HMCN2	Q8NDA2	5059 aa		5.22	□□□□□ -1.57
CCT3-208	ENST00000415548		A0A096LNJ9	63 aa		5.22	□□□□□ -1.57
CCT3-208	ENST00000415548	TRBV30	A0A0K0K1B3	111 aa		5.22	□□□□□ -1.57
CCT3-208	ENST00000415548	OXT	P01178	125 aa		5.22	□□□□□ -1.57
CCT3-208	ENST00000415548	PRSS2	P07478	247 aa		5.22	□□□□□ -1.57
CCT3-208	ENST00000415548	TLX1NB	P0CAT3	122 aa		5.22	□□□□□ -1.57
CCT3-208	ENST00000415548	GAGE2E	Q4V326	116 aa		5.22	□□□□□ -1.57
CCT3-208	ENST00000415548	LINC00469	Q8N7U9	141 aa		5.22	□□□□□ -1.57
CCT3-208	ENST00000415548	PACRG	Q96M98	296 aa	Predicted RBP	5.22	□□□□□ -1.57
CCT3-208	ENST00000415548	GAGE2D	Q9UEU5	116 aa		5.22	□□□□□ -1.57
CCT3-208	ENST00000415548	TNXB	P22105	4242 aa		5.22	□□□□□ -1.57
CCT3-208	ENST00000415548	TINCR	A0A1B0GVN0	87 aa		5.21	□□□□□ -1.58
CCT3-208	ENST00000415548	FAM168B	A1KXE4	195 aa		5.21	□□□□□ -1.58
CCT3-208	ENST00000415548	LINC00614	P0C842	121 aa		5.21	□□□□□ -1.58
CCT3-208	ENST00000415548	CKS1B	P61024	79 aa		5.21	□□□□□ -1.58
CCT3-208	ENST00000415548	PMVK	Q15126	192 aa		5.21	□□□□□ -1.58
CCT3-208	ENST00000415548	PMCHL1	Q16048	86 aa		5.21	□□□□□ -1.58
CCT3-208	ENST00000415548	C6orf226	Q5I0X4	101 aa		5.21	□□□□□ -1.58
CCT3-208	ENST00000415548	PHF5A	Q7RTV0	110 aa	Known RBP	5.21	□□□□□ -1.58
CCT3-208	ENST00000415548	CBLN2	Q8IUK8	224 aa		5.21	□□□□□ -1.58
CCT3-208	ENST00000415548		Q8IZM0	81 aa		5.21	□□□□□ -1.58
CCT3-208	ENST00000415548	SLC7A5P1	Q8MH63	180 aa		5.21	□□□□□ -1.58
CCT3-208	ENST00000415548	IGLV5-45	A0A087WSX0	123 aa		5.2	□□□□□ -1.58
CCT3-208	ENST00000415548	SMIM1	B2RUZ4	78 aa		5.2	□□□□□ -1.58
CCT3-208	ENST00000415548	NDUFC2-KCTD14	E9PQ53	114 aa		5.2	□□□□□ -1.58
CCT3-208	ENST00000415548	HBD	P02042	147 aa		5.2	□□□□□ -1.58
CCT3-208	ENST00000415548	NDUFA6	P56556	154 aa		5.2	□□□□□ -1.58
CCT3-208	ENST00000415548	KRTAP4-12	Q9BQ66	201 aa		5.2	□□□□□ -1.58
CCT3-208	ENST00000415548	GHRH	P01286	108 aa		5.19	□□□□□ -1.58
CCT3-208	ENST00000415548	SPINK8	P0C7L1	97 aa		5.19	□□□□□ -1.58
CCT3-208	ENST00000415548	RAB5B	P61020	215 aa		5.19	□□□□□ -1.58
CCT3-208	ENST00000415548	PDZD11	Q5EBL8	140 aa		5.19	□□□□□ -1.58
CCT3-208	ENST00000415548	C9orf129	Q5T035	196 aa	Known RBP	5.19	□□□□□ -1.58
CCT3-208	ENST00000415548	LCE3B	Q5TA77	95 aa		5.19	□□□□□ -1.58
CCT3-208	ENST00000415548	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	5.19	□□□□□ -1.58
CCT3-208	ENST00000415548	KRTAP7-1	Q8IUC3	87 aa		5.19	□□□□□ -1.58
CCT3-208	ENST00000415548		F8VRH5	84 aa		5.18	□□□□□ -1.58
CCT3-208	ENST00000415548	IGLC3	P0DOY3	106 aa		5.18	□□□□□ -1.58
CCT3-208	ENST00000415548	COX7B2	Q8TF08	81 aa		5.18	□□□□□ -1.58
CCT3-208	ENST00000415548	PSORS1C2	Q9UIG4	136 aa		5.18	□□□□□ -1.58
CCT3-208	ENST00000415548		H3BRM9	83 aa		5.17	□□□□□ -1.58
CCT3-208	ENST00000415548	ATP5L	O75964	103 aa		5.17	□□□□□ -1.58
CCT3-208	ENST00000415548	MT1HL1	P0DM35	61 aa		5.17	□□□□□ -1.58
CCT3-208	ENST00000415548	CXCL5	P42830	114 aa		5.17	□□□□□ -1.58
CCT3-208	ENST00000415548	KRTAP11-1	Q8IUC1	163 aa		5.17	□□□□□ -1.58
CCT3-208	ENST00000415548		M0QXV9	152 aa		5.16	□□□□□ -1.58
CCT3-208	ENST00000415548	ZNF22	P17026	224 aa	Predicted RBP	5.16	□□□□□ -1.58
CCT3-208	ENST00000415548	SRSF9	Q13242	221 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
CCT3-208	ENST00000415548	C1orf137	Q5JT78	98 aa		5.16	□□□□□ -1.58
CCT3-208	ENST00000415548	SPINK6	Q6UWN8	80 aa		5.16	□□□□□ -1.58
CCT3-208	ENST00000415548	BAGE3	Q86Y29	109 aa		5.16	□□□□□ -1.58
CCT3-208	ENST00000415548	CHCHD1	Q96BP2	118 aa	Known RBP	5.16	□□□□□ -1.58
CCT3-208	ENST00000415548	XAGE1A	Q9HD64	81 aa		5.16	□□□□□ -1.58
CCT3-208	ENST00000415548	C11orf86	A6NJI1	115 aa		5.15	□□□□□ -1.59
CCT3-208	ENST00000415548	TRGC2	P03986	189 aa		5.15	□□□□□ -1.59
CCT3-208	ENST00000415548	SERTAD4-AS1	Q5TG53	156 aa		5.15	□□□□□ -1.59
CCT3-208	ENST00000415548	IGLV5-39	A0A0G2JS06	123 aa		5.14	□□□□□ -1.59
CCT3-208	ENST00000415548	UBE2B	P63146	152 aa		5.14	□□□□□ -1.59
CCT3-208	ENST00000415548	FAM19A2	Q8N3H0	131 aa		5.14	□□□□□ -1.59
CCT3-208	ENST00000415548	CHTOP	Q9Y3Y2	248 aa	Known RBP	5.14	□□□□□ -1.59
CCT3-208	ENST00000415548	COLCA2	A8K830	154 aa		5.13	□□□□□ -1.59
CCT3-208	ENST00000415548	HSBP1	O75506	76 aa		5.13	□□□□□ -1.59
CCT3-208	ENST00000415548	TMEM170B	Q5T4T1	132 aa		5.13	□□□□□ -1.59
CCT3-208	ENST00000415548	REG3G	Q6UW15	175 aa		5.13	□□□□□ -1.59
CCT3-208	ENST00000415548	IFI27L1	Q96BM0	104 aa		5.13	□□□□□ -1.59
CCT3-208	ENST00000415548	LINC01600	Q96MT4	127 aa		5.13	□□□□□ -1.59
CCT3-208	ENST00000415548	C22orf24	Q9Y442	160 aa		5.13	□□□□□ -1.59
CCT3-208	ENST00000415548	TRAV12-1	A0A0B4J245	112 aa		5.12	□□□□□ -1.59
CCT3-208	ENST00000415548	SERF1A	O75920	110 aa		5.12	□□□□□ -1.59
CCT3-208	ENST00000415548	IGLV7-43	P04211	117 aa		5.12	□□□□□ -1.59
CCT3-208	ENST00000415548	LINC00310	P59036	64 aa		5.12	□□□□□ -1.59
CCT3-208	ENST00000415548	SCO1	O75880	301 aa		5.11	□□□□□ -1.59
CCT3-208	ENST00000415548	PFN2	P35080	140 aa		5.11	□□□□□ -1.59
CCT3-208	ENST00000415548	LBH	Q53QV2	105 aa	Predicted RBP	5.11	□□□□□ -1.59
CCT3-208	ENST00000415548	TMEM223	A0PJW6	202 aa		5.1	□□□□□ -1.59
CCT3-208	ENST00000415548	NUPR1	O60356	82 aa		5.1	□□□□□ -1.59
CCT3-208	ENST00000415548	ODF1	Q14990	250 aa		5.1	□□□□□ -1.59
CCT3-208	ENST00000415548	KRTAP19-1	Q8IUB9	90 aa		5.1	□□□□□ -1.59
CCT3-208	ENST00000415548	ZNF625	Q96I27	306 aa	Predicted RBP	5.1	□□□□□ -1.59
CCT3-208	ENST00000415548	ERG28	Q9UKR5	140 aa		5.1	□□□□□ -1.59
CCT3-208	ENST00000415548	PLA2G2D	Q9UNK4	145 aa		5.1	□□□□□ -1.59
CCT3-208	ENST00000415548		H0Y8G0	127 aa		5.09	□□□□□ -1.59
CCT3-208	ENST00000415548	LEPROTL1	O95214	131 aa		5.09	□□□□□ -1.59
CCT3-208	ENST00000415548	KRTAP10-8	P60410	259 aa		5.09	□□□□□ -1.59
CCT3-208	ENST00000415548	MRPL55	Q7Z7F7	128 aa	Known RBP	5.09	□□□□□ -1.59
CCT3-208	ENST00000415548	DIRC1	Q969H9	104 aa		5.09	□□□□□ -1.59
CCT3-208	ENST00000415548	TP73-AS1	Q9UF72	201 aa		5.09	□□□□□ -1.59
CCT3-208	ENST00000415548	UBR4	Q5T4S7	5183 aa		5.09	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms