RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 KRTAP13-3Q3SY46 172 aa5.27□□□□□ -1.57
NUP43-204ENST00000403890 FP248Q71RG6 208 aaPredicted RBP5.27□□□□□ -1.57
NUP43-204ENST00000403890 SPANXA1Q9NS26 97 aa5.27□□□□□ -1.57
NUP43-204ENST00000403890 TRBV24-1A0A075B6N3 115 aa5.26□□□□□ -1.57
NUP43-204ENST00000403890 IFITM10A6NMD0 228 aa5.26□□□□□ -1.57
NUP43-204ENST00000403890 KRTAP10-6P60371 365 aaPredicted RBP5.26□□□□□ -1.57
NUP43-204ENST00000403890 FAM229BQ4G0N7 80 aa5.26□□□□□ -1.57
NUP43-204ENST00000403890 MRPL51Q4U2R6 128 aaKnown RBP5.26□□□□□ -1.57
NUP43-204ENST00000403890 FAM74A3Q4VXF1 159 aa5.26□□□□□ -1.57
NUP43-204ENST00000403890 LINC00242Q5T6M2 205 aa5.26□□□□□ -1.57
NUP43-204ENST00000403890 ALKAL2Q6UX46 152 aa5.26□□□□□ -1.57
NUP43-204ENST00000403890 Q6ZUT4 128 aa5.26□□□□□ -1.57
NUP43-204ENST00000403890 NRACQ8N912 160 aa5.26□□□□□ -1.57
NUP43-204ENST00000403890 IGKV2D-26A0A0A0MRZ7 120 aa5.25□□□□□ -1.57
NUP43-204ENST00000403890 IGHV3OR16-9A0A0B4J2B5 98 aa5.25□□□□□ -1.57
NUP43-204ENST00000403890 BCE1O60756 84 aa5.25□□□□□ -1.57
NUP43-204ENST00000403890 TNFRSF6BO95407 300 aa5.25□□□□□ -1.57
NUP43-204ENST00000403890 PRSS2P07478 247 aa5.25□□□□□ -1.57
NUP43-204ENST00000403890 IFI27P40305 119 aaPredicted RBP5.25□□□□□ -1.57
NUP43-204ENST00000403890 RPL32P62910 135 aaKnown RBP5.25□□□□□ -1.57
NUP43-204ENST00000403890 MRPS36P82909 103 aaKnown RBP5.25□□□□□ -1.57
NUP43-204ENST00000403890 LBHQ53QV2 105 aaPredicted RBP5.25□□□□□ -1.57
NUP43-204ENST00000403890 C9orf129Q5T035 196 aaKnown RBP5.25□□□□□ -1.57
NUP43-204ENST00000403890 V9GYV3 84 aa5.25□□□□□ -1.57
NUP43-204ENST00000403890 TRBV30A0A0K0K1B3 111 aa5.24□□□□□ -1.57
NUP43-204ENST00000403890 NDUFC2-KCTD14E9PQ53 114 aa5.24□□□□□ -1.57
NUP43-204ENST00000403890 PPBPP02775 128 aa5.24□□□□□ -1.57
NUP43-204ENST00000403890 RPL39P62891 51 aaKnown RBP5.24□□□□□ -1.57
NUP43-204ENST00000403890 C22orf24Q9Y442 160 aa5.24□□□□□ -1.57
NUP43-204ENST00000403890 SRP19P09132 144 aaKnown RBP5.23□□□□□ -1.57
NUP43-204ENST00000403890 CKS1BP61024 79 aa5.23□□□□□ -1.57
NUP43-204ENST00000403890 ADIRFQ15847 76 aa5.23□□□□□ -1.57
NUP43-204ENST00000403890 KRTAP19-2Q3LHN2 52 aa5.23□□□□□ -1.57
NUP43-204ENST00000403890 C6orf226Q5I0X4 101 aa5.23□□□□□ -1.57
NUP43-204ENST00000403890 AKAP14Q86UN6 197 aa5.23□□□□□ -1.57
NUP43-204ENST00000403890 C2orf88Q9BSF0 95 aa5.23□□□□□ -1.57
NUP43-204ENST00000403890 SMIM2Q9BVW6 85 aa5.23□□□□□ -1.57
NUP43-204ENST00000403890 SMIM27A0A1W2PRY6 76 aa5.22□□□□□ -1.57
NUP43-204ENST00000403890 D6R8Y8 96 aa5.22□□□□□ -1.57
NUP43-204ENST00000403890 RPL23P62829 140 aaKnown RBP5.22□□□□□ -1.57
NUP43-204ENST00000403890 PEA15Q15121 130 aa5.22□□□□□ -1.57
NUP43-204ENST00000403890 Q6ZN92 141 aa5.22□□□□□ -1.57
NUP43-204ENST00000403890 TEX43Q6ZNM6 134 aa5.22□□□□□ -1.57
NUP43-204ENST00000403890 LINC01561Q8N1V8 128 aa5.22□□□□□ -1.57
NUP43-204ENST00000403890 NAT8Q9UHE5 227 aa5.22□□□□□ -1.57
NUP43-204ENST00000403890 TMEM136Q6ZRR5 245 aa5.21□□□□□ -1.58
NUP43-204ENST00000403890 ORMDL3Q8N138 153 aa5.21□□□□□ -1.58
NUP43-204ENST00000403890 TMEM141Q96I45 108 aa5.21□□□□□ -1.58
NUP43-204ENST00000403890 VCX2Q9H322 139 aa5.21□□□□□ -1.58
NUP43-204ENST00000403890 PYGO1Q9Y3Y4 419 aa5.21□□□□□ -1.58
NUP43-204ENST00000403890 A0A1B0GVG6 124 aa5.2□□□□□ -1.58
NUP43-204ENST00000403890 G0S2P27469 103 aa5.2□□□□□ -1.58
NUP43-204ENST00000403890 KIAA0087Q14695 138 aa5.2□□□□□ -1.58
NUP43-204ENST00000403890 MRPL54Q6P161 138 aaKnown RBP5.2□□□□□ -1.58
NUP43-204ENST00000403890 SPAG11AQ6PDA7 123 aa5.2□□□□□ -1.58
NUP43-204ENST00000403890 PRELID3AQ96N28 172 aa5.2□□□□□ -1.58
NUP43-204ENST00000403890 TOMM7Q9P0U1 55 aa5.2□□□□□ -1.58
NUP43-204ENST00000403890 SEC11AP67812 179 aa5.19□□□□□ -1.58
NUP43-204ENST00000403890 PAPPA-AS1Q5QFB9 102 aa5.19□□□□□ -1.58
NUP43-204ENST00000403890 C2orf82Q6UX34 121 aa5.19□□□□□ -1.58
NUP43-204ENST00000403890 MRPL55Q7Z7F7 128 aaKnown RBP5.19□□□□□ -1.58
NUP43-204ENST00000403890 ALKBH7Q9BT30 221 aaPredicted RBP5.19□□□□□ -1.58
NUP43-204ENST00000403890 TP73-AS1Q9UF72 201 aa5.19□□□□□ -1.58
NUP43-204ENST00000403890 LOC389332A0A1B0GUA5 103 aa5.18□□□□□ -1.58
NUP43-204ENST00000403890 M0R2T5 61 aa5.18□□□□□ -1.58
NUP43-204ENST00000403890 NPYP01303 97 aa5.18□□□□□ -1.58
NUP43-204ENST00000403890 UBE2AP49459 152 aa5.18□□□□□ -1.58
NUP43-204ENST00000403890 LINC00469Q8N7U9 141 aa5.18□□□□□ -1.58
NUP43-204ENST00000403890 MAP1LC3AQ9H492 121 aa5.18□□□□□ -1.58
NUP43-204ENST00000403890 CYSLTR1Q9Y271 337 aa5.18□□□□□ -1.58
NUP43-204ENST00000403890 LAMTOR2Q9Y2Q5 125 aa5.18□□□□□ -1.58
NUP43-204ENST00000403890 IGLV4-3A0A075B6K6 122 aa5.17□□□□□ -1.58
NUP43-204ENST00000403890 RPL37AP8A6NKH3 93 aa5.17□□□□□ -1.58
NUP43-204ENST00000403890 ORMDL2Q53FV1 153 aa5.17□□□□□ -1.58
NUP43-204ENST00000403890 ATP5L2Q7Z4Y8 100 aa5.17□□□□□ -1.58
NUP43-204ENST00000403890 KRTAP13-1Q8IUC0 172 aa5.17□□□□□ -1.58
NUP43-204ENST00000403890 FAM104AQ969W3 186 aa5.17□□□□□ -1.58
NUP43-204ENST00000403890 GEMIN7Q9H840 131 aaKnown RBP5.17□□□□□ -1.58
NUP43-204ENST00000403890 XAGE1AQ9HD64 81 aa5.17□□□□□ -1.58
NUP43-204ENST00000403890 PRSS47A8MTI9 375 aa5.16□□□□□ -1.58
NUP43-204ENST00000403890 NPSP0C0P6 89 aa5.16□□□□□ -1.58
NUP43-204ENST00000403890 HERVK_113P63121 156 aa5.16□□□□□ -1.58
NUP43-204ENST00000403890 C2orf66Q6UXQ4 117 aa5.16□□□□□ -1.58
NUP43-204ENST00000403890 Q8IZM0 81 aa5.16□□□□□ -1.58
NUP43-204ENST00000403890 C3orf22Q8N5N4 141 aa5.16□□□□□ -1.58
NUP43-204ENST00000403890 LINC00167Q96N53 147 aa5.16□□□□□ -1.58
NUP43-204ENST00000403890 K7EMI3 77 aa5.15□□□□□ -1.59
NUP43-204ENST00000403890 CXCL5P42830 114 aa5.15□□□□□ -1.59
NUP43-204ENST00000403890 Q8N8P6 123 aa5.15□□□□□ -1.59
NUP43-204ENST00000403890 DAND5Q8N907 189 aa5.15□□□□□ -1.59
NUP43-204ENST00000403890 hCG_2014768A0A024R1R8 64 aa5.14□□□□□ -1.59
NUP43-204ENST00000403890 A0A1B0GXF2 115 aa5.14□□□□□ -1.59
NUP43-204ENST00000403890 F8VRH5 84 aa5.14□□□□□ -1.59
NUP43-204ENST00000403890 AMELXQ99217 191 aa5.14□□□□□ -1.59
NUP43-204ENST00000403890 NKAPP1Q8N9T2 125 aa5.13□□□□□ -1.59
NUP43-204ENST00000403890 NXT2Q9NPJ8 142 aaKnown RBP5.13□□□□□ -1.59
NUP43-204ENST00000403890 GAGE10A6NGK3 116 aa5.12□□□□□ -1.59
NUP43-204ENST00000403890 MT-ND4LP03901 98 aa5.12□□□□□ -1.59
NUP43-204ENST00000403890 FAM19A3Q7Z5A8 133 aa5.12□□□□□ -1.59
NUP43-204ENST00000403890 NDUFA12Q9UI09 145 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms