RNA–Protein interactions for RNA: ENST00000400181.8

KDM1A-202, Transcript of lysine demethylase 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM1A, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-202ENST00000400181 FAM19A5Q7Z5A7 132 aaPredicted RBP12.64□□□□□ -0.39
KDM1A-202ENST00000400181 J3KT08 172 aa12.63□□□□□ -0.39
KDM1A-202ENST00000400181 DEFB130BP0DP73 79 aa12.63□□□□□ -0.39
KDM1A-202ENST00000400181 DEFB130AP0DP74 79 aa12.63□□□□□ -0.39
KDM1A-202ENST00000400181 LINC01561Q8N1V8 128 aa12.63□□□□□ -0.39
KDM1A-202ENST00000400181 TRBV6-8A0A0A6YYG3 113 aa12.63□□□□□ -0.39
KDM1A-202ENST00000400181 IBA57-AS1B1ANH7 110 aa12.63□□□□□ -0.39
KDM1A-202ENST00000400181 USP17L23D6RBM5 183 aa12.63□□□□□ -0.39
KDM1A-202ENST00000400181 CRYGAP11844 174 aa12.63□□□□□ -0.39
KDM1A-202ENST00000400181 ORMDL1Q9P0S3 153 aa12.63□□□□□ -0.39
KDM1A-202ENST00000400181 CCL24O00175 119 aa12.62□□□□□ -0.39
KDM1A-202ENST00000400181 GIG44P09565 113 aaPredicted RBP12.62□□□□□ -0.39
KDM1A-202ENST00000400181 Q6JHZ5 121 aa12.61□□□□□ -0.39
KDM1A-202ENST00000400181 PLAC8L1A1L4L8 177 aa12.6□□□□□ -0.39
KDM1A-202ENST00000400181 FSHBP01225 129 aa12.6□□□□□ -0.39
KDM1A-202ENST00000400181 KRTAP10-9P60411 292 aa12.6□□□□□ -0.39
KDM1A-202ENST00000400181 A0A087WZ39 114 aa12.6□□□□□ -0.39
KDM1A-202ENST00000400181 DSCR8Q96T75 97 aa12.6□□□□□ -0.39
KDM1A-202ENST00000400181 TRBV6-4A0A1B0GX49 114 aa12.6□□□□□ -0.39
KDM1A-202ENST00000400181 ZNF469Q96JG9 3925 aaPredicted RBP12.59□□□□□ -0.39
KDM1A-202ENST00000400181 LINC00959A0A1B0GUT2 108 aa12.59□□□□□ -0.39
KDM1A-202ENST00000400181 SERP2Q8N6R1 65 aa12.59□□□□□ -0.39
KDM1A-202ENST00000400181 TRAV23DV6A0A075B6W5 121 aa12.58□□□□□ -0.4
KDM1A-202ENST00000400181 SS18Q15532 418 aa12.58□□□□□ -0.4
KDM1A-202ENST00000400181 C16orf74Q96GX8 76 aa12.58□□□□□ -0.4
KDM1A-202ENST00000400181 APCP25054 2843 aa12.58□□□□□ -0.4
KDM1A-202ENST00000400181 OBSCN-AS1Q96MR7 158 aa12.57□□□□□ -0.4
KDM1A-202ENST00000400181 FHL2Q14192 279 aa12.56□□□□□ -0.4
KDM1A-202ENST00000400181 TMEM86BQ8N661 226 aa12.56□□□□□ -0.4
KDM1A-202ENST00000400181 FAM19A1Q7Z5A9 133 aa12.56□□□□□ -0.4
KDM1A-202ENST00000400181 ITPR3Q14573 2671 aa12.55□□□□□ -0.4
KDM1A-202ENST00000400181 FLNAP21333 2647 aaKnown RBP12.55□□□□□ -0.4
KDM1A-202ENST00000400181 IGLV10-54A0A075B6I4 117 aa12.55□□□□□ -0.4
KDM1A-202ENST00000400181 C9orf116Q5BN46 136 aaPredicted RBP12.55□□□□□ -0.4
KDM1A-202ENST00000400181 TRAV25A0A0B4J276 109 aa12.54□□□□□ -0.4
KDM1A-202ENST00000400181 ENHOQ6UWT2 76 aa12.54□□□□□ -0.4
KDM1A-202ENST00000400181 CCKP06307 115 aa12.54□□□□□ -0.4
KDM1A-202ENST00000400181 PRB1P04280 392 aa12.53□□□□□ -0.4
KDM1A-202ENST00000400181 GYPEP15421 78 aa12.53□□□□□ -0.4
KDM1A-202ENST00000400181 GHRHP01286 108 aa12.52□□□□□ -0.41
KDM1A-202ENST00000400181 SMIM9A6NGZ8 99 aa12.51□□□□□ -0.41
KDM1A-202ENST00000400181 Q8N814 137 aa12.51□□□□□ -0.41
KDM1A-202ENST00000400181 DPH3Q96FX2 82 aa12.51□□□□□ -0.41
KDM1A-202ENST00000400181 UPK3BQ9BT76 320 aa12.51□□□□□ -0.41
KDM1A-202ENST00000400181 NANOS2P60321 138 aaKnown RBP12.5□□□□□ -0.41
KDM1A-202ENST00000400181 Q8N3U1 123 aa12.49□□□□□ -0.41
KDM1A-202ENST00000400181 ESM1Q9NQ30 184 aa12.49□□□□□ -0.41
KDM1A-202ENST00000400181 HIVEP2P31629 2446 aa12.49□□□□□ -0.41
KDM1A-202ENST00000400181 DNAJC9-AS1A6NH13 148 aa12.49□□□□□ -0.41
KDM1A-202ENST00000400181 C6orf99Q4VX62 202 aa12.49□□□□□ -0.41
KDM1A-202ENST00000400181 LY6G6DO95868 133 aa12.48□□□□□ -0.41
KDM1A-202ENST00000400181 OXTP01178 125 aa12.48□□□□□ -0.41
KDM1A-202ENST00000400181 TMEM258P61165 79 aa12.48□□□□□ -0.41
KDM1A-202ENST00000400181 LINC00269Q8N2A0 174 aa12.47□□□□□ -0.41
KDM1A-202ENST00000400181 C20orf197Q8N268 126 aa12.46□□□□□ -0.41
KDM1A-202ENST00000400181 CSNK1G2-AS1Q8NCQ2 148 aa12.46□□□□□ -0.41
KDM1A-202ENST00000400181 JMJD7-PLA2G4BH0Y9G9 81 aa12.46□□□□□ -0.42
KDM1A-202ENST00000400181 TMEM256-PLSCR3K7ERE1 68 aa12.46□□□□□ -0.42
KDM1A-202ENST00000400181 S100A7L2Q5SY68 101 aa12.45□□□□□ -0.42
KDM1A-202ENST00000400181 Q8IZM0 81 aa12.44□□□□□ -0.42
KDM1A-202ENST00000400181 UBL5Q9BZL1 73 aa12.44□□□□□ -0.42
KDM1A-202ENST00000400181 Q8NDZ9 215 aa12.44□□□□□ -0.42
KDM1A-202ENST00000400181 BBC3Q96PG8 261 aaPredicted RBP12.44□□□□□ -0.42
KDM1A-202ENST00000400181 LAMTOR3Q9UHA4 124 aa12.44□□□□□ -0.42
KDM1A-202ENST00000400181 C5orf47Q569G3 176 aa12.43□□□□□ -0.42
KDM1A-202ENST00000400181 DEFB4AO15263 64 aa12.43□□□□□ -0.42
KDM1A-202ENST00000400181 C19orf73Q9NVV2 129 aa12.43□□□□□ -0.42
KDM1A-202ENST00000400181 RPS28P62857 69 aaKnown RBP12.42□□□□□ -0.42
KDM1A-202ENST00000400181 DEFB113Q30KQ7 82 aa12.42□□□□□ -0.42
KDM1A-202ENST00000400181 M0R2N4 97 aa12.42□□□□□ -0.42
KDM1A-202ENST00000400181 ANGP03950 147 aaKnown RBP12.42□□□□□ -0.42
KDM1A-202ENST00000400181 HAMPP81172 84 aa12.42□□□□□ -0.42
KDM1A-202ENST00000400181 C4orf26Q17RF5 130 aa12.41□□□□□ -0.42
KDM1A-202ENST00000400181 CHCHD10Q8WYQ3 142 aaPredicted RBP12.4□□□□□ -0.42
KDM1A-202ENST00000400181 C6orf223Q8N319 242 aa12.39□□□□□ -0.43
KDM1A-202ENST00000400181 SPATA3Q8NHX4 192 aa12.39□□□□□ -0.43
KDM1A-202ENST00000400181 WFDC11Q8NEX6 87 aa12.39□□□□□ -0.43
KDM1A-202ENST00000400181 IGLV1-51P01701 117 aa12.38□□□□□ -0.43
KDM1A-202ENST00000400181 HRCT1Q6UXD1 115 aa12.38□□□□□ -0.43
KDM1A-202ENST00000400181 LINC00167Q96N53 147 aa12.38□□□□□ -0.43
KDM1A-202ENST00000400181 RBM3P98179 157 aaKnown RBP12.37□□□□□ -0.43
KDM1A-202ENST00000400181 KIAA0087Q14695 138 aa12.37□□□□□ -0.43
KDM1A-202ENST00000400181 LINC01006Q8NI28 216 aa12.37□□□□□ -0.43
KDM1A-202ENST00000400181 C10orf25Q5T742 122 aa12.36□□□□□ -0.43
KDM1A-202ENST00000400181 CMC4P56277 68 aaPredicted RBP12.36□□□□□ -0.43
KDM1A-202ENST00000400181 UNQ6190/PRO20217Q6UXQ8 127 aa12.36□□□□□ -0.43
KDM1A-202ENST00000400181 A0A1B0GUV1 79 aa12.34□□□□□ -0.43
KDM1A-202ENST00000400181 LINC00575Q6W349 94 aa12.34□□□□□ -0.43
KDM1A-202ENST00000400181 SCXQ7RTU7 201 aa12.34□□□□□ -0.43
KDM1A-202ENST00000400181 REG3AQ06141 175 aa12.34□□□□□ -0.43
KDM1A-202ENST00000400181 ATP5EP2Q5VTU8 51 aa12.34□□□□□ -0.43
KDM1A-202ENST00000400181 CD164L2Q6UWJ8 174 aa12.34□□□□□ -0.43
KDM1A-202ENST00000400181 PRO0255Q9UI72 69 aa12.34□□□□□ -0.43
KDM1A-202ENST00000400181 Q6ZQY7 126 aa12.33□□□□□ -0.44
KDM1A-202ENST00000400181 ZNF843Q8N446 348 aa12.33□□□□□ -0.44
KDM1A-202ENST00000400181 SNURFQ9Y675 71 aa12.33□□□□□ -0.44
KDM1A-202ENST00000400181 NDUFC2O95298 119 aa12.32□□□□□ -0.44
KDM1A-202ENST00000400181 Q6ZQT0 140 aa12.32□□□□□ -0.44
KDM1A-202ENST00000400181 USP24Q9UPU5 2620 aa12.32□□□□□ -0.44
KDM1A-202ENST00000400181 TRAV10A0A0B4J240 114 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms