RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 DCHS2Q6V1P9 2916 aa9.91□□□□□ -0.82
SCAF4-202ENST00000399804 KRTAP10-3P60369 221 aa9.91□□□□□ -0.82
SCAF4-202ENST00000399804 NCR3O14931 201 aa9.9□□□□□ -0.82
SCAF4-202ENST00000399804 RPL18AQ02543 176 aaKnown RBP9.9□□□□□ -0.82
SCAF4-202ENST00000399804 FOXI1Q12951 378 aa9.9□□□□□ -0.82
SCAF4-202ENST00000399804 TEN1Q86WV5 123 aa9.9□□□□□ -0.82
SCAF4-202ENST00000399804 X6R8D5 127 aa9.9□□□□□ -0.82
SCAF4-202ENST00000399804 H0YGX0 51 aa9.89□□□□□ -0.83
SCAF4-202ENST00000399804 INAFM2P0DMQ5 153 aa9.89□□□□□ -0.83
SCAF4-202ENST00000399804 TRAV10A0A0B4J240 114 aa9.89□□□□□ -0.83
SCAF4-202ENST00000399804 TIMM17BO60830 172 aa9.89□□□□□ -0.83
SCAF4-202ENST00000399804 GAGE2BQ13066 116 aa9.89□□□□□ -0.83
SCAF4-202ENST00000399804 CELA1Q9UNI1 258 aa9.89□□□□□ -0.83
SCAF4-202ENST00000399804 MT-ATP8P03928 68 aa9.88□□□□□ -0.83
SCAF4-202ENST00000399804 SPANXDQ9BXN6 97 aa9.88□□□□□ -0.83
SCAF4-202ENST00000399804 NOTCH1P46531 2555 aa9.88□□□□□ -0.83
SCAF4-202ENST00000399804 TRIAP1O43715 76 aa9.88□□□□□ -0.83
SCAF4-202ENST00000399804 TMEM126AQ9H061 195 aa9.87□□□□□ -0.83
SCAF4-202ENST00000399804 LECT2O14960 151 aa9.87□□□□□ -0.83
SCAF4-202ENST00000399804 ADAMTSL4-AS1Q5T5F5 129 aa9.87□□□□□ -0.83
SCAF4-202ENST00000399804 C19orf73Q9NVV2 129 aa9.87□□□□□ -0.83
SCAF4-202ENST00000399804 ANAPC13Q9BS18 74 aa9.86□□□□□ -0.83
SCAF4-202ENST00000399804 XAGE1AQ9HD64 81 aa9.86□□□□□ -0.83
SCAF4-202ENST00000399804 CELSR2Q9HCU4 2923 aa9.86□□□□□ -0.83
SCAF4-202ENST00000399804 A0A087WZ39 114 aa9.86□□□□□ -0.83
SCAF4-202ENST00000399804 TRBV10-2A0A0K0K1G8 114 aa9.86□□□□□ -0.83
SCAF4-202ENST00000399804 GIG44P09565 113 aaPredicted RBP9.86□□□□□ -0.83
SCAF4-202ENST00000399804 WFDC9Q8NEX5 89 aa9.86□□□□□ -0.83
SCAF4-202ENST00000399804 CSNK1G2-AS1Q8NCQ2 148 aa9.84□□□□□ -0.83
SCAF4-202ENST00000399804 ORMDL1Q9P0S3 153 aa9.84□□□□□ -0.83
SCAF4-202ENST00000399804 NBEAL2Q6ZNJ1 2754 aa9.83□□□□□ -0.84
SCAF4-202ENST00000399804 A0A1B0GUV1 79 aa9.83□□□□□ -0.84
SCAF4-202ENST00000399804 TRBV30A0A0K0K1B3 111 aa9.83□□□□□ -0.84
SCAF4-202ENST00000399804 KLK5Q9Y337 293 aaPredicted RBP9.83□□□□□ -0.84
SCAF4-202ENST00000399804 Q8IZM0 81 aa9.82□□□□□ -0.84
SCAF4-202ENST00000399804 H3BT86 120 aa9.82□□□□□ -0.84
SCAF4-202ENST00000399804 C15orf53Q8NAA6 179 aa9.82□□□□□ -0.84
SCAF4-202ENST00000399804 XGP55808 180 aa9.81□□□□□ -0.84
SCAF4-202ENST00000399804 BAHCC1Q9P281 2608 aa9.81□□□□□ -0.84
SCAF4-202ENST00000399804 LYPD5Q6UWN5 251 aa9.8□□□□□ -0.84
SCAF4-202ENST00000399804 UNQ6190/PRO20217Q6UXQ8 127 aa9.8□□□□□ -0.84
SCAF4-202ENST00000399804 CYSRT1A8MQ03 144 aa9.8□□□□□ -0.84
SCAF4-202ENST00000399804 C9orf116Q5BN46 136 aaPredicted RBP9.79□□□□□ -0.84
SCAF4-202ENST00000399804 SMCPP49901 116 aaPredicted RBP9.79□□□□□ -0.84
SCAF4-202ENST00000399804 WFDC10BQ8IUB3 73 aa9.79□□□□□ -0.84
SCAF4-202ENST00000399804 PRO0461Q9UI25 63 aa9.79□□□□□ -0.84
SCAF4-202ENST00000399804 HIST1H4AP62805 103 aaKnown RBP9.79□□□□□ -0.84
SCAF4-202ENST00000399804 NF1P21359 2839 aa9.78□□□□□ -0.84
SCAF4-202ENST00000399804 IGHV3OR16-9A0A0B4J2B5 98 aa9.78□□□□□ -0.84
SCAF4-202ENST00000399804 SS18L2Q9UHA2 77 aa9.78□□□□□ -0.84
SCAF4-202ENST00000399804 Q8NAQ8 132 aa9.78□□□□□ -0.84
SCAF4-202ENST00000399804 SYCNQ0VAF6 134 aa9.78□□□□□ -0.84
SCAF4-202ENST00000399804 DEFB105AQ8NG35 78 aa9.78□□□□□ -0.84
SCAF4-202ENST00000399804 B5MCH6 92 aa9.77□□□□□ -0.84
SCAF4-202ENST00000399804 UBE2BP63146 152 aa9.77□□□□□ -0.84
SCAF4-202ENST00000399804 DIRC1Q969H9 104 aa9.77□□□□□ -0.85
SCAF4-202ENST00000399804 IGLV5-39A0A0G2JS06 123 aa9.77□□□□□ -0.85
SCAF4-202ENST00000399804 ETDCA0A1B0GVM5 59 aa9.76□□□□□ -0.85
SCAF4-202ENST00000399804 TEX49A0A1B0GTD5 131 aa9.76□□□□□ -0.85
SCAF4-202ENST00000399804 IGKV2-24A0A0C4DH68 120 aa9.76□□□□□ -0.85
SCAF4-202ENST00000399804 PLAC8L1A1L4L8 177 aa9.76□□□□□ -0.85
SCAF4-202ENST00000399804 SPATA3Q8NHX4 192 aa9.76□□□□□ -0.85
SCAF4-202ENST00000399804 DSCR8Q96T75 97 aa9.76□□□□□ -0.85
SCAF4-202ENST00000399804 F8WEM9 126 aa9.75□□□□□ -0.85
SCAF4-202ENST00000399804 CDIP1Q9H305 208 aa9.75□□□□□ -0.85
SCAF4-202ENST00000399804 C6orf99Q4VX62 202 aa9.75□□□□□ -0.85
SCAF4-202ENST00000399804 HIVEP1P15822 2718 aa9.74□□□□□ -0.85
SCAF4-202ENST00000399804 SLPIP03973 132 aa9.74□□□□□ -0.85
SCAF4-202ENST00000399804 SMIM11BQ8TCY0 68 aa9.74□□□□□ -0.85
SCAF4-202ENST00000399804 IGLV5-45A0A087WSX0 123 aa9.74□□□□□ -0.85
SCAF4-202ENST00000399804 SBSPONQ8IVN8 264 aa9.73□□□□□ -0.85
SCAF4-202ENST00000399804 Q8N3U1 123 aa9.73□□□□□ -0.85
SCAF4-202ENST00000399804 IL17DQ8TAD2 202 aa9.73□□□□□ -0.85
SCAF4-202ENST00000399804 CELSR1Q9NYQ6 3014 aa9.73□□□□□ -0.85
SCAF4-202ENST00000399804 PRR3P79522 188 aaKnown RBP9.73□□□□□ -0.85
SCAF4-202ENST00000399804 C6orf223Q8N319 242 aa9.73□□□□□ -0.85
SCAF4-202ENST00000399804 LST1O00453 97 aa9.72□□□□□ -0.85
SCAF4-202ENST00000399804 UBL5Q9BZL1 73 aa9.72□□□□□ -0.85
SCAF4-202ENST00000399804 HAMPP81172 84 aa9.72□□□□□ -0.85
SCAF4-202ENST00000399804 COX17Q14061 63 aa9.71□□□□□ -0.85
SCAF4-202ENST00000399804 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.71□□□□□ -0.85
SCAF4-202ENST00000399804 TRACP01848 142 aa9.71□□□□□ -0.85
SCAF4-202ENST00000399804 COX7BP24311 80 aa9.7□□□□□ -0.86
SCAF4-202ENST00000399804 ESRGQ1W209 222 aa9.69□□□□□ -0.86
SCAF4-202ENST00000399804 FBN2P35556 2912 aa9.69□□□□□ -0.86
SCAF4-202ENST00000399804 C14orf132Q9NPU4 83 aa9.69□□□□□ -0.86
SCAF4-202ENST00000399804 hADV29S1A0JD25 119 aa9.69□□□□□ -0.86
SCAF4-202ENST00000399804 KRTAP10-11P60412 298 aa9.69□□□□□ -0.86
SCAF4-202ENST00000399804 NBEAL1Q6ZS30 2694 aa9.69□□□□□ -0.86
SCAF4-202ENST00000399804 TMEM256-PLSCR3K7ERE1 68 aa9.68□□□□□ -0.86
SCAF4-202ENST00000399804 ACYP1P07311 99 aa9.68□□□□□ -0.86
SCAF4-202ENST00000399804 NSD1Q96L73 2696 aaPredicted RBP9.67□□□□□ -0.86
SCAF4-202ENST00000399804 JMJD7-PLA2G4BH0Y9G9 81 aa9.67□□□□□ -0.86
SCAF4-202ENST00000399804 M0R2N4 97 aa9.66□□□□□ -0.86
SCAF4-202ENST00000399804 C14orf177Q52M58 125 aa9.65□□□□□ -0.86
SCAF4-202ENST00000399804 CUBNO60494 3623 aa9.65□□□□□ -0.86
SCAF4-202ENST00000399804 IGKV2-28A0A075B6P5 120 aa9.65□□□□□ -0.86
SCAF4-202ENST00000399804 IGKV2D-28P01615 120 aa9.65□□□□□ -0.86
SCAF4-202ENST00000399804 RBM3P98179 157 aaKnown RBP9.65□□□□□ -0.86
SCAF4-202ENST00000399804 MXRA5Q9NR99 2828 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms