RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 SELENOKQ9Y6D0 94 aa2.43□□□□□ -2.02
VPS13C-203ENST00000395896 NDUFC2O95298 119 aa2.43□□□□□ -2.02
VPS13C-203ENST00000395896 LINC00173Q6ZV60 143 aa2.43□□□□□ -2.02
VPS13C-203ENST00000395896 A0A096LNJ9 63 aa2.43□□□□□ -2.02
VPS13C-203ENST00000395896 TRACP01848 142 aa2.43□□□□□ -2.02
VPS13C-203ENST00000395896 MAJINQ3KP22 176 aa2.43□□□□□ -2.02
VPS13C-203ENST00000395896 PRB4P10163 310 aaPredicted RBP2.43□□□□□ -2.02
VPS13C-203ENST00000395896 LINC00308Q8TCZ7 52 aa2.43□□□□□ -2.02
VPS13C-203ENST00000395896 URB1-AS1Q96HZ7 61 aa2.43□□□□□ -2.02
VPS13C-203ENST00000395896 LINC00242Q5T6M2 205 aa2.42□□□□□ -2.02
VPS13C-203ENST00000395896 IGLL5B9A064 214 aa2.42□□□□□ -2.02
VPS13C-203ENST00000395896 C2orf91Q6ZV80 131 aa2.42□□□□□ -2.02
VPS13C-203ENST00000395896 MUSTN1Q8IVN3 82 aa2.42□□□□□ -2.02
VPS13C-203ENST00000395896 CHCHD10Q8WYQ3 142 aaPredicted RBP2.42□□□□□ -2.02
VPS13C-203ENST00000395896 SRRM2Q9UQ35 2752 aaKnown RBP2.42□□□□□ -2.02
VPS13C-203ENST00000395896 FHL2Q14192 279 aa2.42□□□□□ -2.02
VPS13C-203ENST00000395896 TSPAN13O95857 204 aa2.42□□□□□ -2.02
VPS13C-203ENST00000395896 C18orf65Q6ZTR6 163 aa2.42□□□□□ -2.02
VPS13C-203ENST00000395896 Q8N976 141 aa2.42□□□□□ -2.02
VPS13C-203ENST00000395896 IGHV3OR16-9A0A0B4J2B5 98 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 IGHV3-33P01772 117 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 KRTAP1-3Q8IUG1 177 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 SMIM1B2RUZ4 78 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 M0QXV9 152 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 IGHV3-30P01768 117 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 IGHV3-30-5P0DP03 117 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 SMR3AQ99954 134 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 EGFEM1PQ0D2K5 195 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 IMUPQ9GZP8 106 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 RNASE13Q5GAN3 156 aaKnown RBP2.41□□□□□ -2.02
VPS13C-203ENST00000395896 IGLV10-54A0A075B6I4 117 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 DIRC1Q969H9 104 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 C2orf48Q96LS8 159 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 IGLV4-69A0A075B6H9 119 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 TRBV10-2A0A0K0K1G8 114 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 LINC00959A0A1B0GUT2 108 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 FAM240AA0A1B0GVK7 77 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 TAX1BP3O14907 124 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 MRAPQ8TCY5 172 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 RPL28P46779 137 aaKnown RBP2.41□□□□□ -2.02
VPS13C-203ENST00000395896 LINC01620Q4KN68 170 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 OXLD1Q5BKU9 147 aa2.41□□□□□ -2.02
VPS13C-203ENST00000395896 A0A1B0GW54 56 aa2.4□□□□□ -2.02
VPS13C-203ENST00000395896 Q6ZQT7 251 aa2.4□□□□□ -2.02
VPS13C-203ENST00000395896 CSNK1G2-AS1Q8NCQ2 148 aa2.4□□□□□ -2.02
VPS13C-203ENST00000395896 IGLV5-39A0A0G2JS06 123 aa2.4□□□□□ -2.02
VPS13C-203ENST00000395896 FAM19A3Q7Z5A8 133 aa2.4□□□□□ -2.02
VPS13C-203ENST00000395896 A0A096LPF7 62 aa2.4□□□□□ -2.02
VPS13C-203ENST00000395896 GAGE12HA6NDE8 117 aa2.4□□□□□ -2.02
VPS13C-203ENST00000395896 LINC01556Q5JQF7 62 aa2.4□□□□□ -2.02
VPS13C-203ENST00000395896 SYCNQ0VAF6 134 aa2.4□□□□□ -2.03
VPS13C-203ENST00000395896 RBM3P98179 157 aaKnown RBP2.4□□□□□ -2.03
VPS13C-203ENST00000395896 UBE2BP63146 152 aa2.4□□□□□ -2.03
VPS13C-203ENST00000395896 ATP5EP2Q5VTU8 51 aa2.4□□□□□ -2.03
VPS13C-203ENST00000395896 WFDC10AQ9H1F0 79 aa2.4□□□□□ -2.03
VPS13C-203ENST00000395896 ETDCA0A1B0GVM5 59 aa2.4□□□□□ -2.03
VPS13C-203ENST00000395896 SMIM20Q8N5G0 67 aa2.4□□□□□ -2.03
VPS13C-203ENST00000395896 Q9HAA7 133 aa2.4□□□□□ -2.03
VPS13C-203ENST00000395896 HIGD2BQ4VC39 106 aa2.39□□□□□ -2.03
VPS13C-203ENST00000395896 TRRAPQ9Y4A5 3859 aa2.39□□□□□ -2.03
VPS13C-203ENST00000395896 NPC2P61916 151 aa2.39□□□□□ -2.03
VPS13C-203ENST00000395896 BAALC-AS2P0C853 105 aa2.39□□□□□ -2.03
VPS13C-203ENST00000395896 CEMP1Q6PRD7 247 aaPredicted RBP2.39□□□□□ -2.03
VPS13C-203ENST00000395896 CLPSL2Q6UWE3 100 aa2.39□□□□□ -2.03
VPS13C-203ENST00000395896 NDUFC2-KCTD14E9PQ53 114 aa2.39□□□□□ -2.03
VPS13C-203ENST00000395896 K7ERJ3 54 aa2.39□□□□□ -2.03
VPS13C-203ENST00000395896 LST1O00453 97 aa2.39□□□□□ -2.03
VPS13C-203ENST00000395896 DAND5Q8N907 189 aa2.39□□□□□ -2.03
VPS13C-203ENST00000395896 FOXI1Q12951 378 aa2.39□□□□□ -2.03
VPS13C-203ENST00000395896 Q8NAQ8 132 aa2.39□□□□□ -2.03
VPS13C-203ENST00000395896 SPATA3Q8NHX4 192 aa2.39□□□□□ -2.03
VPS13C-203ENST00000395896 DEFB104AQ8WTQ1 72 aa2.39□□□□□ -2.03
VPS13C-203ENST00000395896 A0A0J9YWU9 116 aa2.39□□□□□ -2.03
VPS13C-203ENST00000395896 KRTAP1-1Q07627 177 aa2.39□□□□□ -2.03
VPS13C-203ENST00000395896 GAS8-AS1O95177 125 aa2.38□□□□□ -2.03
VPS13C-203ENST00000395896 LINC00612Q8N6U2 182 aa2.38□□□□□ -2.03
VPS13C-203ENST00000395896 DHRS4-AS1Q9P1J3 65 aa2.38□□□□□ -2.03
VPS13C-203ENST00000395896 DEFB4AO15263 64 aa2.38□□□□□ -2.03
VPS13C-203ENST00000395896 TTTY13Q9BZ97 58 aa2.38□□□□□ -2.03
VPS13C-203ENST00000395896 Q6ZTC4 211 aa2.38□□□□□ -2.03
VPS13C-203ENST00000395896 LECT2O14960 151 aa2.38□□□□□ -2.03
VPS13C-203ENST00000395896 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.38□□□□□ -2.03
VPS13C-203ENST00000395896 C19orf73Q9NVV2 129 aa2.38□□□□□ -2.03
VPS13C-203ENST00000395896 GAGE2AQ6NT46 116 aa2.38□□□□□ -2.03
VPS13C-203ENST00000395896 LINC00643Q86TS7 51 aa2.38□□□□□ -2.03
VPS13C-203ENST00000395896 LYPD5Q6UWN5 251 aa2.38□□□□□ -2.03
VPS13C-203ENST00000395896 GVQW2A0A096LPI5 108 aaPredicted RBP2.38□□□□□ -2.03
VPS13C-203ENST00000395896 M0R378 163 aa2.38□□□□□ -2.03
VPS13C-203ENST00000395896 NTN5Q8WTR8 489 aaPredicted RBP2.38□□□□□ -2.03
VPS13C-203ENST00000395896 X6R8D5 127 aa2.38□□□□□ -2.03
VPS13C-203ENST00000395896 hADV29S1A0JD25 119 aa2.38□□□□□ -2.03
VPS13C-203ENST00000395896 CYSRT1A8MQ03 144 aa2.38□□□□□ -2.03
VPS13C-203ENST00000395896 B5MCH6 92 aa2.38□□□□□ -2.03
VPS13C-203ENST00000395896 NAA38Q9BRA0 125 aaKnown RBP2.38□□□□□ -2.03
VPS13C-203ENST00000395896 RPL18AQ02543 176 aaKnown RBP2.37□□□□□ -2.03
VPS13C-203ENST00000395896 EDN2P20800 178 aa2.37□□□□□ -2.03
VPS13C-203ENST00000395896 MAPKAPK5-AS1Q8N8E1 139 aa2.37□□□□□ -2.03
VPS13C-203ENST00000395896 COX7BP24311 80 aa2.37□□□□□ -2.03
VPS13C-203ENST00000395896 TRBV7-6A0A0J9YX20 115 aa2.37□□□□□ -2.03
VPS13C-203ENST00000395896 RBMY1FQ15415 496 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms