RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 C18orf32Q8TCD1 76 aa8.85□□□□□ -0.99
CLCN6-203ENST00000376490 CST9LQ9H4G1 147 aa8.85□□□□□ -0.99
CLCN6-203ENST00000376490 PHF5AQ7RTV0 110 aaKnown RBP8.84□□□□□ -0.99
CLCN6-203ENST00000376490 PACRGQ96M98 296 aaPredicted RBP8.84□□□□□ -0.99
CLCN6-203ENST00000376490 LINC00614P0C842 121 aa8.83□□□□□ -1
CLCN6-203ENST00000376490 CKS1BP61024 79 aa8.83□□□□□ -1
CLCN6-203ENST00000376490 Q8IZM0 81 aa8.83□□□□□ -1
CLCN6-203ENST00000376490 A0A096LNJ9 63 aa8.82□□□□□ -1
CLCN6-203ENST00000376490 TINCRA0A1B0GVN0 87 aa8.82□□□□□ -1
CLCN6-203ENST00000376490 PMVKQ15126 192 aa8.82□□□□□ -1
CLCN6-203ENST00000376490 LINC00469Q8N7U9 141 aa8.82□□□□□ -1
CLCN6-203ENST00000376490 YPEL4Q96NS1 127 aa8.82□□□□□ -1
CLCN6-203ENST00000376490 UBR4Q5T4S7 5183 aa8.81□□□□□ -1
CLCN6-203ENST00000376490 NDUFC2-KCTD14E9PQ53 114 aa8.81□□□□□ -1
CLCN6-203ENST00000376490 MT1HL1P0DM35 61 aa8.81□□□□□ -1
CLCN6-203ENST00000376490 SRSF9Q13242 221 aaKnown RBP eCLIP8.81□□□□□ -1
CLCN6-203ENST00000376490 PMCHL1Q16048 86 aa8.81□□□□□ -1
CLCN6-203ENST00000376490 KRTAP7-1Q8IUC3 87 aa8.81□□□□□ -1
CLCN6-203ENST00000376490 PSORS1C2Q9UIG4 136 aa8.81□□□□□ -1
CLCN6-203ENST00000376490 IGLV5-45A0A087WSX0 123 aa8.8□□□□□ -1
CLCN6-203ENST00000376490 SMIM1B2RUZ4 78 aa8.8□□□□□ -1
CLCN6-203ENST00000376490 C9orf129Q5T035 196 aaKnown RBP8.8□□□□□ -1
CLCN6-203ENST00000376490 FAM19A5Q7Z5A7 132 aaPredicted RBP8.8□□□□□ -1
CLCN6-203ENST00000376490 NDUFA6P56556 154 aa8.79□□□□□ -1
CLCN6-203ENST00000376490 PDZD11Q5EBL8 140 aa8.79□□□□□ -1
CLCN6-203ENST00000376490 SPINK6Q6UWN8 80 aa8.79□□□□□ -1
CLCN6-203ENST00000376490 KRTAP11-1Q8IUC1 163 aa8.79□□□□□ -1
CLCN6-203ENST00000376490 F8VRH5 84 aa8.78□□□□□ -1
CLCN6-203ENST00000376490 SPINK8P0C7L1 97 aa8.78□□□□□ -1
CLCN6-203ENST00000376490 SLC7A5P1Q8MH63 180 aa8.78□□□□□ -1
CLCN6-203ENST00000376490 COX7B2Q8TF08 81 aa8.78□□□□□ -1
CLCN6-203ENST00000376490 HBDP02042 147 aa8.77□□□□□ -1.01
CLCN6-203ENST00000376490 RAB5BP61020 215 aa8.77□□□□□ -1.01
CLCN6-203ENST00000376490 C1orf137Q5JT78 98 aa8.77□□□□□ -1.01
CLCN6-203ENST00000376490 CBLN2Q8IUK8 224 aa8.77□□□□□ -1.01
CLCN6-203ENST00000376490 SERTAD4-AS1Q5TG53 156 aa8.76□□□□□ -1.01
CLCN6-203ENST00000376490 LINC01600Q96MT4 127 aa8.76□□□□□ -1.01
CLCN6-203ENST00000376490 IGLC3P0DOY3 106 aa8.75□□□□□ -1.01
CLCN6-203ENST00000376490 CXCL5P42830 114 aa8.75□□□□□ -1.01
CLCN6-203ENST00000376490 XAGE1AQ9HD64 81 aa8.75□□□□□ -1.01
CLCN6-203ENST00000376490 M0QXV9 152 aa8.74□□□□□ -1.01
CLCN6-203ENST00000376490 H3BRM9 83 aa8.73□□□□□ -1.01
CLCN6-203ENST00000376490 ATP5LO75964 103 aa8.73□□□□□ -1.01
CLCN6-203ENST00000376490 REG3GQ6UW15 175 aa8.73□□□□□ -1.01
CLCN6-203ENST00000376490 BAGE3Q86Y29 109 aa8.73□□□□□ -1.01
CLCN6-203ENST00000376490 IGLV7-43P04211 117 aa8.72□□□□□ -1.01
CLCN6-203ENST00000376490 ZNF22P17026 224 aaPredicted RBP8.72□□□□□ -1.01
CLCN6-203ENST00000376490 UBE2BP63146 152 aa8.72□□□□□ -1.01
CLCN6-203ENST00000376490 CHCHD1Q96BP2 118 aaKnown RBP8.71□□□□□ -1.02
CLCN6-203ENST00000376490 C22orf24Q9Y442 160 aa8.71□□□□□ -1.02
CLCN6-203ENST00000376490 IGLV5-39A0A0G2JS06 123 aa8.7□□□□□ -1.02
CLCN6-203ENST00000376490 C11orf86A6NJI1 115 aa8.7□□□□□ -1.02
CLCN6-203ENST00000376490 TRGC2P03986 189 aa8.7□□□□□ -1.02
CLCN6-203ENST00000376490 KRTAP10-8P60410 259 aa8.7□□□□□ -1.02
CLCN6-203ENST00000376490 ODF1Q14990 250 aa8.69□□□□□ -1.02
CLCN6-203ENST00000376490 TMEM170BQ5T4T1 132 aa8.68□□□□□ -1.02
CLCN6-203ENST00000376490 FAM19A2Q8N3H0 131 aa8.68□□□□□ -1.02
CLCN6-203ENST00000376490 IFI27L1Q96BM0 104 aa8.68□□□□□ -1.02
CLCN6-203ENST00000376490 CHTOPQ9Y3Y2 248 aaKnown RBP8.68□□□□□ -1.02
CLCN6-203ENST00000376490 PLA2G2DQ9UNK4 145 aa8.67□□□□□ -1.02
CLCN6-203ENST00000376490 HSBP1O75506 76 aa8.66□□□□□ -1.02
CLCN6-203ENST00000376490 PFN2P35080 140 aa8.66□□□□□ -1.02
CLCN6-203ENST00000376490 LBHQ53QV2 105 aaPredicted RBP8.66□□□□□ -1.02
CLCN6-203ENST00000376490 DIRC1Q969H9 104 aa8.66□□□□□ -1.02
CLCN6-203ENST00000376490 TRAV12-1A0A0B4J245 112 aa8.65□□□□□ -1.02
CLCN6-203ENST00000376490 COLCA2A8K830 154 aa8.65□□□□□ -1.02
CLCN6-203ENST00000376490 ZNF625Q96I27 306 aaPredicted RBP8.65□□□□□ -1.02
CLCN6-203ENST00000376490 H0Y9J4 135 aa8.64□□□□□ -1.03
CLCN6-203ENST00000376490 LINC00310P59036 64 aa8.64□□□□□ -1.03
CLCN6-203ENST00000376490 MRPL55Q7Z7F7 128 aaKnown RBP8.64□□□□□ -1.03
CLCN6-203ENST00000376490 LINC00167Q96N53 147 aa8.64□□□□□ -1.03
CLCN6-203ENST00000376490 TP73-AS1Q9UF72 201 aa8.64□□□□□ -1.03
CLCN6-203ENST00000376490 TNXBP22105 4242 aa8.64□□□□□ -1.03
CLCN6-203ENST00000376490 RPL37AP8A6NKH3 93 aa8.63□□□□□ -1.03
CLCN6-203ENST00000376490 NUPR1O60356 82 aa8.63□□□□□ -1.03
CLCN6-203ENST00000376490 ERG28Q9UKR5 140 aa8.63□□□□□ -1.03
CLCN6-203ENST00000376490 TMEM223A0PJW6 202 aa8.62□□□□□ -1.03
CLCN6-203ENST00000376490 SERF1AO75920 110 aa8.62□□□□□ -1.03
CLCN6-203ENST00000376490 HMCN2Q8NDA2 5059 aa8.61□□□□□ -1.03
CLCN6-203ENST00000376490 GAGE10A6NGK3 116 aa8.61□□□□□ -1.03
CLCN6-203ENST00000376490 SND1-IT1Q9HBX3 110 aa8.61□□□□□ -1.03
CLCN6-203ENST00000376490 IGLV5-37A0A075B6J1 123 aa8.6□□□□□ -1.03
CLCN6-203ENST00000376490 H0Y8G0 127 aa8.6□□□□□ -1.03
CLCN6-203ENST00000376490 SCO1O75880 301 aa8.6□□□□□ -1.03
CLCN6-203ENST00000376490 COX17Q14061 63 aa8.6□□□□□ -1.03
CLCN6-203ENST00000376490 PRR26Q8N8Z3 221 aa8.6□□□□□ -1.03
CLCN6-203ENST00000376490 ZNF861PO60384 105 aa8.59□□□□□ -1.03
CLCN6-203ENST00000376490 LEPROTL1O95214 131 aa8.59□□□□□ -1.03
CLCN6-203ENST00000376490 NKAPP1Q8N9T2 125 aa8.59□□□□□ -1.03
CLCN6-203ENST00000376490 KRTAP1-4P0C5Y4 121 aa8.58□□□□□ -1.04
CLCN6-203ENST00000376490 FABP4P15090 132 aa8.58□□□□□ -1.04
CLCN6-203ENST00000376490 A0A0U1RRA0 63 aa8.57□□□□□ -1.04
CLCN6-203ENST00000376490 BCE1O60756 84 aa8.57□□□□□ -1.04
CLCN6-203ENST00000376490 LINC00158P58513 81 aa8.57□□□□□ -1.04
CLCN6-203ENST00000376490 SFTA2Q6UW10 78 aa8.57□□□□□ -1.04
CLCN6-203ENST00000376490 VPREB1P12018 145 aa8.56□□□□□ -1.04
CLCN6-203ENST00000376490 Q8NDZ9 215 aa8.56□□□□□ -1.04
CLCN6-203ENST00000376490 IGKV2-28A0A075B6P5 120 aa8.55□□□□□ -1.04
CLCN6-203ENST00000376490 IGKV2D-28P01615 120 aa8.55□□□□□ -1.04
CLCN6-203ENST00000376490 SMIM13P0DJ93 91 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms