RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 FAM236AA0A1B0GUQ0 79 aa12.53□□□□□ -0.4
TRAF3IP1-201ENST00000373327 FAM236BA0A1B0GV22 79 aa12.53□□□□□ -0.4
TRAF3IP1-201ENST00000373327 FSHBP01225 129 aa12.53□□□□□ -0.4
TRAF3IP1-201ENST00000373327 PRO0461Q9UI25 63 aa12.53□□□□□ -0.4
TRAF3IP1-201ENST00000373327 Q8N2B8 174 aa12.53□□□□□ -0.4
TRAF3IP1-201ENST00000373327 HAMPP81172 84 aa12.52□□□□□ -0.4
TRAF3IP1-201ENST00000373327 LST1O00453 97 aa12.52□□□□□ -0.41
TRAF3IP1-201ENST00000373327 RETNQ9HD89 108 aa12.52□□□□□ -0.41
TRAF3IP1-201ENST00000373327 CCL18P55774 89 aa12.51□□□□□ -0.41
TRAF3IP1-201ENST00000373327 CAMK2N2Q96S95 79 aa12.51□□□□□ -0.41
TRAF3IP1-201ENST00000373327 Q8N3U1 123 aa12.51□□□□□ -0.41
TRAF3IP1-201ENST00000373327 SPATA25Q9BR10 227 aa12.51□□□□□ -0.41
TRAF3IP1-201ENST00000373327 CLUHP3Q96NS8 147 aa12.51□□□□□ -0.41
TRAF3IP1-201ENST00000373327 ORMDL1Q9P0S3 153 aa12.5□□□□□ -0.41
TRAF3IP1-201ENST00000373327 DEFB105AQ8NG35 78 aa12.49□□□□□ -0.41
TRAF3IP1-201ENST00000373327 SMIM11BQ8TCY0 68 aa12.49□□□□□ -0.41
TRAF3IP1-201ENST00000373327 OVOL2Q9BRP0 275 aa12.49□□□□□ -0.41
TRAF3IP1-201ENST00000373327 CR1P17927 2039 aa12.48□□□□□ -0.41
TRAF3IP1-201ENST00000373327 C9orf153Q5TBE3 101 aa12.47□□□□□ -0.41
TRAF3IP1-201ENST00000373327 SOSTDC1Q6X4U4 206 aa12.47□□□□□ -0.41
TRAF3IP1-201ENST00000373327 C1orf43Q9BWL3 253 aa12.45□□□□□ -0.42
TRAF3IP1-201ENST00000373327 BSNQ9UPA5 3926 aa12.45□□□□□ -0.42
TRAF3IP1-201ENST00000373327 CDIP1Q9H305 208 aa12.45□□□□□ -0.42
TRAF3IP1-201ENST00000373327 NIPBLQ6KC79 2804 aaeCLIP12.45□□□□□ -0.42
TRAF3IP1-201ENST00000373327 H0YGX0 51 aa12.45□□□□□ -0.42
TRAF3IP1-201ENST00000373327 FHL3Q13643 280 aa12.45□□□□□ -0.42
TRAF3IP1-201ENST00000373327 TIMM17BO60830 172 aa12.44□□□□□ -0.42
TRAF3IP1-201ENST00000373327 SDIM1Q6ZPB5 146 aa12.44□□□□□ -0.42
TRAF3IP1-201ENST00000373327 C6orf99Q4VX62 202 aa12.44□□□□□ -0.42
TRAF3IP1-201ENST00000373327 CSMD2Q7Z408 3487 aa12.44□□□□□ -0.42
TRAF3IP1-201ENST00000373327 IBA57-AS1B1ANH7 110 aa12.44□□□□□ -0.42
TRAF3IP1-201ENST00000373327 IGHV4-30-4P0DP06 118 aa12.44□□□□□ -0.42
TRAF3IP1-201ENST00000373327 UNQ6190/PRO20217Q6UXQ8 127 aa12.42□□□□□ -0.42
TRAF3IP1-201ENST00000373327 C6orf223Q8N319 242 aa12.42□□□□□ -0.42
TRAF3IP1-201ENST00000373327 A8MTW9 85 aa12.42□□□□□ -0.42
TRAF3IP1-201ENST00000373327 LINC00337Q8N6G1 96 aa12.42□□□□□ -0.42
TRAF3IP1-201ENST00000373327 HIVEP1P15822 2718 aa12.42□□□□□ -0.42
TRAF3IP1-201ENST00000373327 NDUFV3P56181 108 aaKnown RBP12.42□□□□□ -0.42
TRAF3IP1-201ENST00000373327 LYRM9A8MSI8 78 aa12.41□□□□□ -0.42
TRAF3IP1-201ENST00000373327 A0A087WYN8 130 aa12.41□□□□□ -0.42
TRAF3IP1-201ENST00000373327 NKAPP1Q8N9T2 125 aa12.41□□□□□ -0.42
TRAF3IP1-201ENST00000373327 TMEM126AQ9H061 195 aa12.4□□□□□ -0.42
TRAF3IP1-201ENST00000373327 CELA1Q9UNI1 258 aa12.4□□□□□ -0.42
TRAF3IP1-201ENST00000373327 PSCAO43653 123 aa12.39□□□□□ -0.43
TRAF3IP1-201ENST00000373327 UBE2DNLQ8IWF7 75 aa12.39□□□□□ -0.43
TRAF3IP1-201ENST00000373327 LITAFQ99732 161 aa12.39□□□□□ -0.43
TRAF3IP1-201ENST00000373327 SMIM9A6NGZ8 99 aa12.38□□□□□ -0.43
TRAF3IP1-201ENST00000373327 KRTAP1-3Q8IUG1 177 aa12.38□□□□□ -0.43
TRAF3IP1-201ENST00000373327 UBL5Q9BZL1 73 aa12.38□□□□□ -0.43
TRAF3IP1-201ENST00000373327 A0A087WZ39 114 aa12.37□□□□□ -0.43
TRAF3IP1-201ENST00000373327 IGLV5-39A0A0G2JS06 123 aa12.37□□□□□ -0.43
TRAF3IP1-201ENST00000373327 CSDC2Q9Y534 153 aaKnown RBP12.37□□□□□ -0.43
TRAF3IP1-201ENST00000373327 CD164L2Q6UWJ8 174 aa12.37□□□□□ -0.43
TRAF3IP1-201ENST00000373327 DSCR8Q96T75 97 aa12.37□□□□□ -0.43
TRAF3IP1-201ENST00000373327 GIG44P09565 113 aaPredicted RBP12.36□□□□□ -0.43
TRAF3IP1-201ENST00000373327 C16orf95Q9H693 158 aa12.36□□□□□ -0.43
TRAF3IP1-201ENST00000373327 TRACP01848 142 aa12.35□□□□□ -0.43
TRAF3IP1-201ENST00000373327 IGHV3OR16-9A0A0B4J2B5 98 aa12.35□□□□□ -0.43
TRAF3IP1-201ENST00000373327 KPRPQ5T749 579 aaPredicted RBP12.35□□□□□ -0.43
TRAF3IP1-201ENST00000373327 CYSRT1A8MQ03 144 aa12.34□□□□□ -0.43
TRAF3IP1-201ENST00000373327 FAM218AQ96MZ4 157 aa12.34□□□□□ -0.43
TRAF3IP1-201ENST00000373327 CCDC179H3BU77 68 aa12.34□□□□□ -0.43
TRAF3IP1-201ENST00000373327 SMIM20Q8N5G0 67 aa12.34□□□□□ -0.43
TRAF3IP1-201ENST00000373327 MIFP14174 115 aa12.33□□□□□ -0.44
TRAF3IP1-201ENST00000373327 NANOS2P60321 138 aaKnown RBP12.33□□□□□ -0.44
TRAF3IP1-201ENST00000373327 SPATA3Q8NHX4 192 aa12.33□□□□□ -0.44
TRAF3IP1-201ENST00000373327 A0A1B0GX51 115 aa12.33□□□□□ -0.44
TRAF3IP1-201ENST00000373327 WFDC9Q8NEX5 89 aa12.33□□□□□ -0.44
TRAF3IP1-201ENST00000373327 DEFB131BA0A096LNP1 70 aa12.33□□□□□ -0.44
TRAF3IP1-201ENST00000373327 ACYP1P07311 99 aa12.33□□□□□ -0.44
TRAF3IP1-201ENST00000373327 SCXQ7RTU7 201 aa12.32□□□□□ -0.44
TRAF3IP1-201ENST00000373327 NSD1Q96L73 2696 aaPredicted RBP12.32□□□□□ -0.44
TRAF3IP1-201ENST00000373327 KIR2DL5BQ8NHK3 375 aa12.32□□□□□ -0.44
TRAF3IP1-201ENST00000373327 C11orf45Q8TAV5 145 aa12.32□□□□□ -0.44
TRAF3IP1-201ENST00000373327 CXCL5P42830 114 aa12.31□□□□□ -0.44
TRAF3IP1-201ENST00000373327 Q6ZTC4 211 aa12.31□□□□□ -0.44
TRAF3IP1-201ENST00000373327 LINC00643Q86TS7 51 aa12.3□□□□□ -0.44
TRAF3IP1-201ENST00000373327 X6R8D5 127 aa12.3□□□□□ -0.44
TRAF3IP1-201ENST00000373327 TRAV23DV6A0A075B6W5 121 aa12.29□□□□□ -0.44
TRAF3IP1-201ENST00000373327 IGKV2-28A0A075B6P5 120 aa12.29□□□□□ -0.44
TRAF3IP1-201ENST00000373327 IGLV5-45A0A087WSX0 123 aa12.29□□□□□ -0.44
TRAF3IP1-201ENST00000373327 IGKV2D-28P01615 120 aa12.29□□□□□ -0.44
TRAF3IP1-201ENST00000373327 Q6ZQY7 126 aa12.29□□□□□ -0.44
TRAF3IP1-201ENST00000373327 Q8IZM0 81 aa12.28□□□□□ -0.44
TRAF3IP1-201ENST00000373327 KRTAP10-3P60369 221 aa12.28□□□□□ -0.44
TRAF3IP1-201ENST00000373327 WFDC10BQ8IUB3 73 aa12.28□□□□□ -0.44
TRAF3IP1-201ENST00000373327 DIRC1Q969H9 104 aa12.28□□□□□ -0.44
TRAF3IP1-201ENST00000373327 FAM104AQ969W3 186 aa12.27□□□□□ -0.44
TRAF3IP1-201ENST00000373327 A0A087WVE0 104 aa12.27□□□□□ -0.45
TRAF3IP1-201ENST00000373327 A0A0J9YWU9 116 aa12.27□□□□□ -0.45
TRAF3IP1-201ENST00000373327 hADV29S1A0JD25 119 aa12.27□□□□□ -0.45
TRAF3IP1-201ENST00000373327 RBM3P98179 157 aaKnown RBP12.27□□□□□ -0.45
TRAF3IP1-201ENST00000373327 LELP1Q5T871 98 aa12.26□□□□□ -0.45
TRAF3IP1-201ENST00000373327 IGKV2-24A0A0C4DH68 120 aa12.26□□□□□ -0.45
TRAF3IP1-201ENST00000373327 PLAC8L1A1L4L8 177 aa12.26□□□□□ -0.45
TRAF3IP1-201ENST00000373327 RPL28P46779 137 aaKnown RBP12.25□□□□□ -0.45
TRAF3IP1-201ENST00000373327 C19orf73Q9NVV2 129 aa12.25□□□□□ -0.45
TRAF3IP1-201ENST00000373327 CITED1Q99966 193 aa12.25□□□□□ -0.45
TRAF3IP1-201ENST00000373327 TMEM256-PLSCR3K7ERE1 68 aa12.25□□□□□ -0.45
TRAF3IP1-201ENST00000373327 C10orf25Q5T742 122 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms