RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 VPS13BQ7Z7G8 4022 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 IGKV3D-11A0A0A0MRZ8 115 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 C19orf71A6NCJ1 209 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 TRGV3P03979 118 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 SMIM13P0DJ93 91 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 RBM3P98179 157 aaKnown RBP2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 ZNF117Q03924 483 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 PSMG4Q5JS54 123 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 CFAP126Q5VTH2 177 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 SLC48A1Q6P1K1 146 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 ADM2Q7Z4H4 148 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 Q8N976 141 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 CMTM2Q8TAZ6 248 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 CIRBP-AS1Q8TBR5 109 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 TMEM14AQ9Y6G1 99 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 SMAD5-AS1Q9Y6J3 95 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 TCRBV4S1A1TA0A5B7 111 aa2.31□□□□□ -2.04
ECHDC1-205ENST00000368295 C16orf90A8MZG2 172 aa2.31□□□□□ -2.04
ECHDC1-205ENST00000368295 F2Z2F3 143 aa2.31□□□□□ -2.04
ECHDC1-205ENST00000368295 RTL8CO15255 209 aa2.31□□□□□ -2.04
ECHDC1-205ENST00000368295 GAS8-AS1O95177 125 aa2.31□□□□□ -2.04
ECHDC1-205ENST00000368295 RNASE2P10153 161 aaKnown RBP2.31□□□□□ -2.04
ECHDC1-205ENST00000368295 RPL28P46779 137 aaKnown RBP2.31□□□□□ -2.04
ECHDC1-205ENST00000368295 ESRGQ1W209 222 aa2.31□□□□□ -2.04
ECHDC1-205ENST00000368295 Q6P435 159 aa2.31□□□□□ -2.04
ECHDC1-205ENST00000368295 LINC00269Q8N2A0 174 aa2.31□□□□□ -2.04
ECHDC1-205ENST00000368295 Q8N377 158 aa2.31□□□□□ -2.04
ECHDC1-205ENST00000368295 IGKV1D-17A0A075B6S4 117 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 TRAV3A0A0B4J244 114 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 CRYM-AS1A6NIL9 109 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 IGLV1-51P01701 117 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 ASAH2BP0C7U1 165 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 SYCNQ0VAF6 134 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 Q1RN00 199 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 C2orf91Q6ZV80 131 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 MIR7-3HGQ8N6C7 128 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 Q8N814 137 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 ODF3Q96PU9 254 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 SCRT1Q9BWW7 348 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 KRTAP2-2Q9BYT5 123 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 CYP4F30PQ9H0H9 118 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 PCNX3Q9H6A9 2034 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 NDUFA12Q9UI09 145 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 ICOSQ9Y6W8 199 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 PKHD1L1Q86WI1 4243 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 TRAV13-2A0A0B4J235 113 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 TRBV10-2A0A0K0K1G8 114 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 CCL22O00626 93 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 P0C879 139 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 ZNF816Q0VGE8 651 aaPredicted RBP2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 TMEM170BQ5T4T1 132 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 Q5VSD8 79 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 XAF1Q6GPH4 301 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 LINC00643Q86TS7 51 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 NDUFA11Q86Y39 141 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 KLHL30-AS1Q8NEE0 82 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 C16orf74Q96GX8 76 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 HEATR5BQ9P2D3 2071 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 TANC2Q9HCD6 1990 aa2.3□□□□□ -2.04
ECHDC1-205ENST00000368295 LRP1Q07954 4544 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 TRAV7A0A075B6U4 112 aa2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 IGHV3-64DA0A0J9YX35 117 aa2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 A6NIN4 97 aa2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 IGLV2-11P01706 119 aa2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 ROMO1P60602 79 aa2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 UBE2G1P62253 170 aa2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 DEFB134Q4QY38 66 aa2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 RPL7L1Q6DKI1 246 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 CYP2G1PQ6ZSU1 146 aa2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 ZNF826PQ6ZT77 177 aa2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 Q8IYB0 196 aa2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 DYNLRB1Q9NP97 96 aa2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 C14orf132Q9NPU4 83 aa2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 TIMM9Q9Y5J7 89 aa2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 HEATR1Q9H583 2144 aaKnown RBP2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 IGKV2D-26A0A0A0MRZ7 120 aa2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 H3BPC8 53 aa2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 LYZL1Q6UWQ5 148 aa2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 ZNF355PQ9NSJ1 428 aa2.29□□□□□ -2.04
ECHDC1-205ENST00000368295 LOC107984156A0A0G2JMH3 177 aa2.28□□□□□ -2.04
ECHDC1-205ENST00000368295 TRBV10-3A0A0K0K1G6 114 aa2.28□□□□□ -2.04
ECHDC1-205ENST00000368295 KLKP1Q107X0 134 aa2.28□□□□□ -2.04
ECHDC1-205ENST00000368295 S100A7L2Q5SY68 101 aa2.28□□□□□ -2.04
ECHDC1-205ENST00000368295 ARL17AQ8IVW1 177 aa2.28□□□□□ -2.04
ECHDC1-205ENST00000368295 FAM19A2Q8N3H0 131 aa2.28□□□□□ -2.04
ECHDC1-205ENST00000368295 TIMM21Q9BVV7 248 aa2.28□□□□□ -2.04
ECHDC1-205ENST00000368295 HIGD1BQ9P298 99 aa2.28□□□□□ -2.04
ECHDC1-205ENST00000368295 LINC00474Q9P2X8 69 aa2.28□□□□□ -2.04
ECHDC1-205ENST00000368295 A0A0B4J2C4 111 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 H7C2G1 150 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 CRPP02741 224 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 CLPSP04118 112 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 CFC1BP0CG36 223 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 DNAH10OSP0CZ25 163 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 C9orf116Q5BN46 136 aaPredicted RBP2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 CASC2Q6XLA1 102 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 SPANXA2-OT1Q8N9U9 137 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 C1orf64Q8NEQ6 169 aa2.27□□□□□ -2.05
ECHDC1-205ENST00000368295 TVP23CQ96ET8 276 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms