RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 hDV103S1A0JD37 113 aa3.36□□□□□ -1.87
ECHDC1-204ENST00000368292 A8MWP4 228 aa3.36□□□□□ -1.87
ECHDC1-204ENST00000368292 SH2D1AO60880 128 aa3.36□□□□□ -1.87
ECHDC1-204ENST00000368292 IGHV1-8P0DP01 117 aa3.36□□□□□ -1.87
ECHDC1-204ENST00000368292 KRTAP10-5P60370 271 aa3.36□□□□□ -1.87
ECHDC1-204ENST00000368292 ZNF56Q15929 161 aa3.36□□□□□ -1.87
ECHDC1-204ENST00000368292 SLC48A1Q6P1K1 146 aa3.36□□□□□ -1.87
ECHDC1-204ENST00000368292 C6orf201Q7Z4U5 140 aa3.36□□□□□ -1.87
ECHDC1-204ENST00000368292 CYB561D1Q8N8Q1 229 aa3.36□□□□□ -1.87
ECHDC1-204ENST00000368292 SMCR5Q8TEV8 140 aa3.36□□□□□ -1.87
ECHDC1-204ENST00000368292 TRAPPC1Q9Y5R8 145 aa3.36□□□□□ -1.87
ECHDC1-204ENST00000368292 C19orf71A6NCJ1 209 aa3.35□□□□□ -1.87
ECHDC1-204ENST00000368292 H7BZZ5 65 aa3.35□□□□□ -1.87
ECHDC1-204ENST00000368292 LECT2O14960 151 aa3.35□□□□□ -1.87
ECHDC1-204ENST00000368292 IGKV1D-33P01593 117 aa3.35□□□□□ -1.87
ECHDC1-204ENST00000368292 IGKV1-33P01594 117 aa3.35□□□□□ -1.87
ECHDC1-204ENST00000368292 DEFB112Q30KQ8 113 aa3.35□□□□□ -1.87
ECHDC1-204ENST00000368292 BAGE3Q86Y29 109 aa3.35□□□□□ -1.87
ECHDC1-204ENST00000368292 BAGE2Q86Y30 109 aa3.35□□□□□ -1.87
ECHDC1-204ENST00000368292 C20orf203Q8NBC4 194 aa3.35□□□□□ -1.87
ECHDC1-204ENST00000368292 WFDC9Q8NEX5 89 aa3.35□□□□□ -1.87
ECHDC1-204ENST00000368292 NHP2Q9NX24 153 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-204ENST00000368292 VPS13DQ5THJ4 4388 aa3.35□□□□□ -1.87
ECHDC1-204ENST00000368292 DNAH11Q96DT5 4516 aa3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 FAT2Q9NYQ8 4349 aa3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 IGLV11-55A0A075B6I3 123 aa3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 IGKV2D-26A0A0A0MRZ7 120 aa3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 A0A1B0GVX0 72 aa3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 A6NIN4 97 aa3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 C11orf94C9JXX5 98 aa3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 FXYD1O00168 92 aa3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 CPSF4O95639 269 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 IGLV1-51P01701 117 aa3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 TRGV3P03979 118 aa3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 RPL28P46779 137 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 DSCR4P56555 118 aaPredicted RBP3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 IGLV3-21P80748 117 aaPredicted RBP3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 SYCNQ0VAF6 134 aa3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 LYPD5Q6UWN5 251 aa3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 FAM19A2Q8N3H0 131 aa3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 Q8N814 137 aa3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 DYNLRB1Q9NP97 96 aa3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 HILPDAQ9Y5L2 63 aa3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 SMAD5-AS1Q9Y6J3 95 aa3.34□□□□□ -1.87
ECHDC1-204ENST00000368292 TANC2Q9HCD6 1990 aa3.33□□□□□ -1.88
ECHDC1-204ENST00000368292 LHBP01229 141 aa3.33□□□□□ -1.88
ECHDC1-204ENST00000368292 XCL1P47992 114 aa3.33□□□□□ -1.88
ECHDC1-204ENST00000368292 ZNF117Q03924 483 aa3.33□□□□□ -1.88
ECHDC1-204ENST00000368292 KLKP1Q107X0 134 aa3.33□□□□□ -1.88
ECHDC1-204ENST00000368292 NNATQ16517 81 aa3.33□□□□□ -1.88
ECHDC1-204ENST00000368292 Q8IYB0 196 aa3.33□□□□□ -1.88
ECHDC1-204ENST00000368292 CYP4F30PQ9H0H9 118 aa3.33□□□□□ -1.88
ECHDC1-204ENST00000368292 RPP21Q9H633 154 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-204ENST00000368292 ARL2-SNX15V9GYD0 113 aa3.33□□□□□ -1.88
ECHDC1-204ENST00000368292 IGHV3-73A0A0B4J1V6 119 aa3.32□□□□□ -1.88
ECHDC1-204ENST00000368292 IGHV1-46P01743 117 aa3.32□□□□□ -1.88
ECHDC1-204ENST00000368292 GCHFRP30047 84 aa3.32□□□□□ -1.88
ECHDC1-204ENST00000368292 BRD3OSQ6XYD6 125 aa3.32□□□□□ -1.88
ECHDC1-204ENST00000368292 SDIM1Q6ZPB5 146 aa3.32□□□□□ -1.88
ECHDC1-204ENST00000368292 DYNAPQ8N1N2 210 aa3.32□□□□□ -1.88
ECHDC1-204ENST00000368292 TOMM5Q8N4H5 51 aa3.32□□□□□ -1.88
ECHDC1-204ENST00000368292 Q8NDZ9 215 aa3.32□□□□□ -1.88
ECHDC1-204ENST00000368292 TIMM21Q9BVV7 248 aa3.32□□□□□ -1.88
ECHDC1-204ENST00000368292 DNAH2Q9P225 4427 aa3.32□□□□□ -1.88
ECHDC1-204ENST00000368292 TRAV40A0A0B4J280 105 aa3.31□□□□□ -1.88
ECHDC1-204ENST00000368292 IGHV1-3A0A0C4DH29 117 aa3.31□□□□□ -1.88
ECHDC1-204ENST00000368292 IGHV1-18A0A0C4DH31 117 aa3.31□□□□□ -1.88
ECHDC1-204ENST00000368292 TMEM223A0PJW6 202 aa3.31□□□□□ -1.88
ECHDC1-204ENST00000368292 C16orf90A8MZG2 172 aa3.31□□□□□ -1.88
ECHDC1-204ENST00000368292 H3BMM0 161 aa3.31□□□□□ -1.88
ECHDC1-204ENST00000368292 VMO1Q7Z5L0 202 aa3.31□□□□□ -1.88
ECHDC1-204ENST00000368292 SPTSSBQ8NFR3 76 aa3.31□□□□□ -1.88
ECHDC1-204ENST00000368292 CIRBP-AS1Q8TBR5 109 aa3.31□□□□□ -1.88
ECHDC1-204ENST00000368292 UBE2WQ96B02 151 aa3.31□□□□□ -1.88
ECHDC1-204ENST00000368292 TP53TG3Q9ULZ0 132 aa3.31□□□□□ -1.88
ECHDC1-204ENST00000368292 TRBV6-7A0A0A0MS04 114 aa3.3□□□□□ -1.88
ECHDC1-204ENST00000368292 TRBV7-1A0A0A6YYK4 115 aa3.3□□□□□ -1.88
ECHDC1-204ENST00000368292 TRBV10-3A0A0K0K1G6 114 aa3.3□□□□□ -1.88
ECHDC1-204ENST00000368292 A0A1B0GVY2 172 aa3.3□□□□□ -1.88
ECHDC1-204ENST00000368292 A6NDX4 124 aa3.3□□□□□ -1.88
ECHDC1-204ENST00000368292 INSP01308 110 aa3.3□□□□□ -1.88
ECHDC1-204ENST00000368292 CRPP02741 224 aa3.3□□□□□ -1.88
ECHDC1-204ENST00000368292 IL4P05112 153 aa3.3□□□□□ -1.88
ECHDC1-204ENST00000368292 TLX1NBP0CAT3 122 aa3.3□□□□□ -1.88
ECHDC1-204ENST00000368292 ROMO1P60602 79 aa3.3□□□□□ -1.88
ECHDC1-204ENST00000368292 C9orf116Q5BN46 136 aaPredicted RBP3.3□□□□□ -1.88
ECHDC1-204ENST00000368292 C1orf134Q5TEV5 83 aa3.3□□□□□ -1.88
ECHDC1-204ENST00000368292 FAM223AQ8IWN6 122 aa3.3□□□□□ -1.88
ECHDC1-204ENST00000368292 Q8N9W7 124 aa3.3□□□□□ -1.88
ECHDC1-204ENST00000368292 FAM103A1Q9BTL3 118 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-204ENST00000368292 LINC00574Q9H8X3 128 aa3.3□□□□□ -1.88
ECHDC1-204ENST00000368292 IGHV3-15A0A0B4J1V0 119 aa3.29□□□□□ -1.88
ECHDC1-204ENST00000368292 A0A1B0GWA3 101 aa3.29□□□□□ -1.88
ECHDC1-204ENST00000368292 HCG22E2RYF7 251 aa3.29□□□□□ -1.88
ECHDC1-204ENST00000368292 CD24P25063 80 aa3.29□□□□□ -1.88
ECHDC1-204ENST00000368292 FXYD2P54710 66 aa3.29□□□□□ -1.88
ECHDC1-204ENST00000368292 LYZP61626 148 aa3.29□□□□□ -1.88
ECHDC1-204ENST00000368292 C15orf32Q32M92 178 aa3.29□□□□□ -1.88
ECHDC1-204ENST00000368292 CASC2Q6XLA1 102 aa3.29□□□□□ -1.88
ECHDC1-204ENST00000368292 NTM-AS1Q6ZSK4 140 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms