RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 RELNP78509 3460 aa5.98□□□□□ -1.45
PTPRK-206ENST00000368215 PRB2P02812 416 aaPredicted RBP5.98□□□□□ -1.45
PTPRK-206ENST00000368215 SS18L2Q9UHA2 77 aa5.98□□□□□ -1.45
PTPRK-206ENST00000368215 TRACP01848 142 aa5.98□□□□□ -1.45
PTPRK-206ENST00000368215 PRR3P79522 188 aaKnown RBP5.98□□□□□ -1.45
PTPRK-206ENST00000368215 C11orf45Q8TAV5 145 aa5.98□□□□□ -1.45
PTPRK-206ENST00000368215 C6orf99Q4VX62 202 aa5.98□□□□□ -1.45
PTPRK-206ENST00000368215 KIR2DL5BQ8NHK3 375 aa5.98□□□□□ -1.45
PTPRK-206ENST00000368215 SMCPP49901 116 aaPredicted RBP5.97□□□□□ -1.45
PTPRK-206ENST00000368215 DEFB131BA0A096LNP1 70 aa5.97□□□□□ -1.45
PTPRK-206ENST00000368215 A0A087WZ39 114 aa5.97□□□□□ -1.45
PTPRK-206ENST00000368215 ITPR1Q14643 2758 aa5.97□□□□□ -1.45
PTPRK-206ENST00000368215 KPRPQ5T749 579 aaPredicted RBP5.96□□□□□ -1.45
PTPRK-206ENST00000368215 DIRC1Q969H9 104 aa5.96□□□□□ -1.46
PTPRK-206ENST00000368215 UNQ6190/PRO20217Q6UXQ8 127 aa5.95□□□□□ -1.46
PTPRK-206ENST00000368215 PRO0461Q9UI25 63 aa5.95□□□□□ -1.46
PTPRK-206ENST00000368215 LELP1Q5T871 98 aa5.95□□□□□ -1.46
PTPRK-206ENST00000368215 NDUFV3P56181 108 aaKnown RBP5.95□□□□□ -1.46
PTPRK-206ENST00000368215 IGLV5-39A0A0G2JS06 123 aa5.95□□□□□ -1.46
PTPRK-206ENST00000368215 Q8IZM0 81 aa5.95□□□□□ -1.46
PTPRK-206ENST00000368215 RMI2Q96E14 147 aa5.95□□□□□ -1.46
PTPRK-206ENST00000368215 SDIM1Q6ZPB5 146 aa5.94□□□□□ -1.46
PTPRK-206ENST00000368215 LINC00643Q86TS7 51 aa5.94□□□□□ -1.46
PTPRK-206ENST00000368215 F8WEM9 126 aa5.94□□□□□ -1.46
PTPRK-206ENST00000368215 JMJD7-PLA2G4BH0Y9G9 81 aa5.94□□□□□ -1.46
PTPRK-206ENST00000368215 TMEM256-PLSCR3K7ERE1 68 aa5.94□□□□□ -1.46
PTPRK-206ENST00000368215 RBM3P98179 157 aaKnown RBP5.94□□□□□ -1.46
PTPRK-206ENST00000368215 hADV29S1A0JD25 119 aa5.93□□□□□ -1.46
PTPRK-206ENST00000368215 CYSRT1A8MQ03 144 aa5.93□□□□□ -1.46
PTPRK-206ENST00000368215 A0A1B0GX51 115 aa5.93□□□□□ -1.46
PTPRK-206ENST00000368215 NANOS2P60321 138 aaKnown RBP5.93□□□□□ -1.46
PTPRK-206ENST00000368215 UBE2BP63146 152 aa5.93□□□□□ -1.46
PTPRK-206ENST00000368215 SOSTDC1Q6X4U4 206 aa5.93□□□□□ -1.46
PTPRK-206ENST00000368215 CELA1Q9UNI1 258 aa5.93□□□□□ -1.46
PTPRK-206ENST00000368215 ETDCA0A1B0GVM5 59 aa5.93□□□□□ -1.46
PTPRK-206ENST00000368215 C6orf223Q8N319 242 aa5.93□□□□□ -1.46
PTPRK-206ENST00000368215 LINC00337Q8N6G1 96 aa5.93□□□□□ -1.46
PTPRK-206ENST00000368215 ZANQ9Y493 2812 aa5.92□□□□□ -1.46
PTPRK-206ENST00000368215 A0A087WYN8 130 aa5.92□□□□□ -1.46
PTPRK-206ENST00000368215 IGHV3OR16-9A0A0B4J2B5 98 aa5.92□□□□□ -1.46
PTPRK-206ENST00000368215 COX7BP24311 80 aa5.92□□□□□ -1.46
PTPRK-206ENST00000368215 ASH1LQ9NR48 2969 aaKnown RBP5.92□□□□□ -1.46
PTPRK-206ENST00000368215 EIF4EBP3O60516 100 aaPredicted RBP5.92□□□□□ -1.46
PTPRK-206ENST00000368215 A0A0J9YWU9 116 aa5.92□□□□□ -1.46
PTPRK-206ENST00000368215 Q8N3U1 123 aa5.92□□□□□ -1.46
PTPRK-206ENST00000368215 MGAM2Q2M2H8 2515 aa5.91□□□□□ -1.46
PTPRK-206ENST00000368215 HRNRQ86YZ3 2850 aaPredicted RBP5.91□□□□□ -1.46
PTPRK-206ENST00000368215 Q6ZTC4 211 aa5.91□□□□□ -1.46
PTPRK-206ENST00000368215 KRTAP1-3Q8IUG1 177 aa5.91□□□□□ -1.46
PTPRK-206ENST00000368215 CDIP1Q9H305 208 aa5.91□□□□□ -1.46
PTPRK-206ENST00000368215 IGLV5-45A0A087WSX0 123 aa5.91□□□□□ -1.46
PTPRK-206ENST00000368215 A8MTW9 85 aa5.91□□□□□ -1.46
PTPRK-206ENST00000368215 RPL28P46779 137 aaKnown RBP5.91□□□□□ -1.46
PTPRK-206ENST00000368215 LITAFQ99732 161 aa5.9□□□□□ -1.46
PTPRK-206ENST00000368215 X6R8D5 127 aa5.9□□□□□ -1.46
PTPRK-206ENST00000368215 Q6ZQY7 126 aa5.9□□□□□ -1.46
PTPRK-206ENST00000368215 TEP1Q99973 2627 aaKnown RBP5.9□□□□□ -1.46
PTPRK-206ENST00000368215 IGKV2-24A0A0C4DH68 120 aa5.9□□□□□ -1.47
PTPRK-206ENST00000368215 A0A1B0GUV1 79 aa5.9□□□□□ -1.47
PTPRK-206ENST00000368215 SHISA2Q6UWI4 295 aa5.9□□□□□ -1.47
PTPRK-206ENST00000368215 GCN1Q92616 2671 aaKnown RBP5.9□□□□□ -1.47
PTPRK-206ENST00000368215 MAST4O15021 2626 aa5.9□□□□□ -1.47
PTPRK-206ENST00000368215 GIG44P09565 113 aaPredicted RBP5.89□□□□□ -1.47
PTPRK-206ENST00000368215 IGKV2-28A0A075B6P5 120 aa5.89□□□□□ -1.47
PTPRK-206ENST00000368215 IGKV2D-28P01615 120 aa5.89□□□□□ -1.47
PTPRK-206ENST00000368215 NBEAL2Q6ZNJ1 2754 aa5.89□□□□□ -1.47
PTPRK-206ENST00000368215 SYCNQ0VAF6 134 aa5.89□□□□□ -1.47
PTPRK-206ENST00000368215 WFDC10BQ8IUB3 73 aa5.89□□□□□ -1.47
PTPRK-206ENST00000368215 TRAV23DV6A0A075B6W5 121 aa5.88□□□□□ -1.47
PTPRK-206ENST00000368215 ATOX1O00244 68 aa5.88□□□□□ -1.47
PTPRK-206ENST00000368215 SMIM20Q8N5G0 67 aa5.88□□□□□ -1.47
PTPRK-206ENST00000368215 SCXQ7RTU7 201 aa5.88□□□□□ -1.47
PTPRK-206ENST00000368215 UTP20O75691 2785 aaKnown RBP5.88□□□□□ -1.47
PTPRK-206ENST00000368215 UNC79Q9P2D8 2635 aa5.87□□□□□ -1.47
PTPRK-206ENST00000368215 CRYBG3Q68DQ2 2970 aa5.87□□□□□ -1.47
PTPRK-206ENST00000368215 COX17Q14061 63 aa5.87□□□□□ -1.47
PTPRK-206ENST00000368215 SBSPONQ8IVN8 264 aa5.87□□□□□ -1.47
PTPRK-206ENST00000368215 CSNK1G2-AS1Q8NCQ2 148 aa5.87□□□□□ -1.47
PTPRK-206ENST00000368215 FAM218AQ96MZ4 157 aa5.87□□□□□ -1.47
PTPRK-206ENST00000368215 CCDC179H3BU77 68 aa5.86□□□□□ -1.47
PTPRK-206ENST00000368215 SMG1Q96Q15 3661 aaKnown RBP5.86□□□□□ -1.47
PTPRK-206ENST00000368215 LYPD5Q6UWN5 251 aa5.86□□□□□ -1.47
PTPRK-206ENST00000368215 ENHOQ6UWT2 76 aa5.86□□□□□ -1.47
PTPRK-206ENST00000368215 C19orf73Q9NVV2 129 aa5.86□□□□□ -1.47
PTPRK-206ENST00000368215 CR1P17927 2039 aa5.86□□□□□ -1.47
PTPRK-206ENST00000368215 SETXQ7Z333 2677 aaKnown RBP5.86□□□□□ -1.47
PTPRK-206ENST00000368215 TRBV10-3A0A0K0K1G6 114 aa5.86□□□□□ -1.47
PTPRK-206ENST00000368215 NREPQ16612 68 aa5.86□□□□□ -1.47
PTPRK-206ENST00000368215 DCHS2Q6V1P9 2916 aa5.86□□□□□ -1.47
PTPRK-206ENST00000368215 FAM19A5Q7Z5A7 132 aaPredicted RBP5.85□□□□□ -1.47
PTPRK-206ENST00000368215 WFDC9Q8NEX5 89 aa5.85□□□□□ -1.47
PTPRK-206ENST00000368215 UBR5O95071 2799 aaPredicted RBP5.85□□□□□ -1.47
PTPRK-206ENST00000368215 PLAC8L1A1L4L8 177 aa5.85□□□□□ -1.47
PTPRK-206ENST00000368215 FUSP35637 526 aaKnown RBP eCLIP5.85□□□□□ -1.473e-6■■■■□ 20.3
PTPRK-206ENST00000368215 KRTAP10-3P60369 221 aa5.85□□□□□ -1.47
PTPRK-206ENST00000368215 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.85□□□□□ -1.47
PTPRK-206ENST00000368215 Q8N814 137 aa5.85□□□□□ -1.47
PTPRK-206ENST00000368215 TRAV10A0A0B4J240 114 aa5.84□□□□□ -1.47
PTPRK-206ENST00000368215 RPL37AP8A6NKH3 93 aa5.84□□□□□ -1.47
PTPRK-206ENST00000368215 UPK3BQ9BT76 320 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms