RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 DMAC1Q96GE9 116 aa2.71□□□□□ -1.98
SYNE1-207ENST00000367255 RPL39LQ96EH5 51 aaKnown RBP2.71□□□□□ -1.98
SYNE1-207ENST00000367255 SMIM1B2RUZ4 78 aa2.71□□□□□ -1.98
SYNE1-207ENST00000367255 ZSWIM8A7E2V4 1837 aa2.71□□□□□ -1.98
SYNE1-207ENST00000367255 ZNF503-AS2A6NEH8 195 aa2.71□□□□□ -1.98
SYNE1-207ENST00000367255 FDCSPQ8NFU4 85 aa2.71□□□□□ -1.98
SYNE1-207ENST00000367255 Q8NBF4 154 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 PTPRBP23467 1997 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 H7BZZ5 65 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 REG3AQ06141 175 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 FAM104AQ969W3 186 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 ODF3L1Q8IXM7 274 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 Q75L30 129 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 FAM19A4Q96LR4 140 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 A0A096LNI7 61 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 C4orf26Q17RF5 130 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 LINC00242Q5T6M2 205 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 FASNP49327 2511 aaKnown RBP2.7□□□□□ -1.98
SYNE1-207ENST00000367255 BRWD1-AS2P59051 145 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 H0Y9P7 68 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 OBSL1O75147 1896 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 A0A0J9YXV3 536 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 WFDC10AQ9H1F0 79 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 SYCNQ0VAF6 134 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 SNURFQ9Y675 71 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 ZNF702PQ9H963 129 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 ANGP03950 147 aaKnown RBP2.7□□□□□ -1.98
SYNE1-207ENST00000367255 Q6ZRX8 168 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 RNASE3P12724 160 aaKnown RBP2.7□□□□□ -1.98
SYNE1-207ENST00000367255 WDR90Q96KV7 1748 aa2.7□□□□□ -1.98
SYNE1-207ENST00000367255 IGLV6-57P01721 117 aa2.69□□□□□ -1.98
SYNE1-207ENST00000367255 CRIP3Q6Q6R5 217 aa2.69□□□□□ -1.98
SYNE1-207ENST00000367255 PCNX3Q9H6A9 2034 aa2.69□□□□□ -1.98
SYNE1-207ENST00000367255 HRCT1Q6UXD1 115 aa2.69□□□□□ -1.98
SYNE1-207ENST00000367255 INAFM1C9JVW0 142 aa2.69□□□□□ -1.98
SYNE1-207ENST00000367255 C10orf25Q5T742 122 aa2.69□□□□□ -1.98
SYNE1-207ENST00000367255 LCA10Q71F78 164 aa2.69□□□□□ -1.98
SYNE1-207ENST00000367255 TCF20Q9UGU0 1960 aaKnown RBP2.69□□□□□ -1.98
SYNE1-207ENST00000367255 NUP210Q8TEM1 1887 aaPredicted RBP2.69□□□□□ -1.98
SYNE1-207ENST00000367255 IGLV10-54A0A075B6I4 117 aa2.69□□□□□ -1.98
SYNE1-207ENST00000367255 DEFB136Q30KP8 78 aa2.69□□□□□ -1.98
SYNE1-207ENST00000367255 PSPHP1O15172 72 aa2.68□□□□□ -1.98
SYNE1-207ENST00000367255 E7EQL1 145 aa2.68□□□□□ -1.98
SYNE1-207ENST00000367255 RPL39P62891 51 aaKnown RBP2.68□□□□□ -1.98
SYNE1-207ENST00000367255 C1orf137Q5JT78 98 aa2.68□□□□□ -1.98
SYNE1-207ENST00000367255 A0A096LNJ9 63 aa2.68□□□□□ -1.98
SYNE1-207ENST00000367255 ZNF843Q8N446 348 aa2.68□□□□□ -1.98
SYNE1-207ENST00000367255 CRIP1P50238 77 aa2.68□□□□□ -1.98
SYNE1-207ENST00000367255 LY6G6EA0A0G2JKS1 128 aa2.68□□□□□ -1.98
SYNE1-207ENST00000367255 U3KQA8 63 aa2.68□□□□□ -1.98
SYNE1-207ENST00000367255 MUC4Q99102 2169 aa2.68□□□□□ -1.98
SYNE1-207ENST00000367255 FNDC1Q4ZHG4 1894 aaPredicted RBP2.68□□□□□ -1.98
SYNE1-207ENST00000367255 Q6ZQT0 140 aa2.67□□□□□ -1.98
SYNE1-207ENST00000367255 Q8N9W7 124 aa2.67□□□□□ -1.98
SYNE1-207ENST00000367255 SIP14410 1827 aa2.67□□□□□ -1.98
SYNE1-207ENST00000367255 M0R2N4 97 aa2.67□□□□□ -1.98
SYNE1-207ENST00000367255 EML5Q05BV3 1969 aa2.67□□□□□ -1.98
SYNE1-207ENST00000367255 CHCHD10Q8WYQ3 142 aaPredicted RBP2.67□□□□□ -1.98
SYNE1-207ENST00000367255 LINC00336Q6ZUF6 198 aa2.67□□□□□ -1.98
SYNE1-207ENST00000367255 NOP10Q9NPE3 64 aaKnown RBP2.67□□□□□ -1.98
SYNE1-207ENST00000367255 A8MWP4 228 aa2.67□□□□□ -1.98
SYNE1-207ENST00000367255 COL4A5P29400 1685 aa2.67□□□□□ -1.98
SYNE1-207ENST00000367255 IGLV5-48A0A075B6I7 105 aa2.67□□□□□ -1.98
SYNE1-207ENST00000367255 FAM215AQ9Y5M1 114 aa2.67□□□□□ -1.98
SYNE1-207ENST00000367255 A6NDX4 124 aa2.67□□□□□ -1.98
SYNE1-207ENST00000367255 EPG5Q9HCE0 2579 aa2.67□□□□□ -1.98
SYNE1-207ENST00000367255 PTPRSQ13332 1948 aa2.67□□□□□ -1.98
SYNE1-207ENST00000367255 Q6ZQY7 126 aa2.67□□□□□ -1.98
SYNE1-207ENST00000367255 KIF25-AS1Q9Y6Z4 181 aa2.67□□□□□ -1.98
SYNE1-207ENST00000367255 C3orf84H3BNL1 204 aa2.67□□□□□ -1.98
SYNE1-207ENST00000367255 LINC00337Q8N6G1 96 aa2.67□□□□□ -1.98
SYNE1-207ENST00000367255 UNQ9165/PRO28630Q6UXU0 137 aa2.66□□□□□ -1.98
SYNE1-207ENST00000367255 SEM1Q6ZVN7 128 aa2.66□□□□□ -1.98
SYNE1-207ENST00000367255 ADAMTS9Q9P2N4 1935 aa2.66□□□□□ -1.98
SYNE1-207ENST00000367255 EPM2AB3EWF7 344 aa2.66□□□□□ -1.98
SYNE1-207ENST00000367255 C9orf116Q5BN46 136 aaPredicted RBP2.66□□□□□ -1.98
SYNE1-207ENST00000367255 C7orf33Q8WU49 177 aa2.66□□□□□ -1.98
SYNE1-207ENST00000367255 X6R8D5 127 aa2.66□□□□□ -1.98
SYNE1-207ENST00000367255 SPINK13Q1W4C9 94 aa2.66□□□□□ -1.98
SYNE1-207ENST00000367255 SOSTDC1Q6X4U4 206 aa2.66□□□□□ -1.98
SYNE1-207ENST00000367255 ARHGAP32A7KAX9 2087 aa2.66□□□□□ -1.98
SYNE1-207ENST00000367255 C1orf64Q8NEQ6 169 aa2.66□□□□□ -1.98
SYNE1-207ENST00000367255 GYPEP15421 78 aa2.66□□□□□ -1.98
SYNE1-207ENST00000367255 SMIM11BQ8TCY0 68 aa2.66□□□□□ -1.98
SYNE1-207ENST00000367255 GRNP28799 593 aaKnown RBP2.66□□□□□ -1.98
SYNE1-207ENST00000367255 Q9UF83 564 aa2.66□□□□□ -1.98
SYNE1-207ENST00000367255 MSMPQ1L6U9 139 aa2.65□□□□□ -1.98
SYNE1-207ENST00000367255 ZFHX2Q9C0A1 2572 aaPredicted RBP2.65□□□□□ -1.98
SYNE1-207ENST00000367255 C16orf95Q9H693 158 aa2.65□□□□□ -1.98
SYNE1-207ENST00000367255 ANAPC11Q9NYG5 84 aa2.65□□□□□ -1.98
SYNE1-207ENST00000367255 LINC00959A0A1B0GUT2 108 aa2.65□□□□□ -1.98
SYNE1-207ENST00000367255 TLX1NBP0CAT3 122 aa2.65□□□□□ -1.98
SYNE1-207ENST00000367255 C22orf24Q9Y442 160 aa2.65□□□□□ -1.98
SYNE1-207ENST00000367255 Q6ZS46 218 aa2.65□□□□□ -1.99
SYNE1-207ENST00000367255 IGLV5-37A0A075B6J1 123 aa2.65□□□□□ -1.99
SYNE1-207ENST00000367255 TET2Q6N021 2002 aaPredicted RBP2.65□□□□□ -1.99
SYNE1-207ENST00000367255 COX6A2Q02221 97 aa2.65□□□□□ -1.99
SYNE1-207ENST00000367255 LINC01556Q5JQF7 62 aa2.65□□□□□ -1.99
SYNE1-207ENST00000367255 STAB1Q9NY15 2570 aa2.65□□□□□ -1.99
SYNE1-207ENST00000367255 PSCAO43653 123 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms