RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 ODF3L2Q3SX64 289 aa11.4□□□□□ -0.58
CLSTN1-201ENST00000361311 BRCA2P51587 3418 aa11.39□□□□□ -0.59
CLSTN1-201ENST00000361311 RANBP2P49792 3224 aaKnown RBP11.39□□□□□ -0.59
CLSTN1-201ENST00000361311 COX17Q14061 63 aa11.39□□□□□ -0.59
CLSTN1-201ENST00000361311 IGLV5-45A0A087WSX0 123 aa11.39□□□□□ -0.59
CLSTN1-201ENST00000361311 PSCAO43653 123 aa11.39□□□□□ -0.59
CLSTN1-201ENST00000361311 C4orf26Q17RF5 130 aa11.39□□□□□ -0.59
CLSTN1-201ENST00000361311 SMCR5Q8TEV8 140 aa11.39□□□□□ -0.59
CLSTN1-201ENST00000361311 WFDC10AQ9H1F0 79 aa11.39□□□□□ -0.59
CLSTN1-201ENST00000361311 BBC3Q96PG8 261 aaPredicted RBP11.38□□□□□ -0.59
CLSTN1-201ENST00000361311 C1orf158Q8N1D5 194 aa11.38□□□□□ -0.59
CLSTN1-201ENST00000361311 MUC4Q99102 2169 aa11.37□□□□□ -0.59
CLSTN1-201ENST00000361311 RMI2Q96E14 147 aa11.37□□□□□ -0.59
CLSTN1-201ENST00000361311 C9orf116Q5BN46 136 aaPredicted RBP11.36□□□□□ -0.59
CLSTN1-201ENST00000361311 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.35□□□□□ -0.59
CLSTN1-201ENST00000361311 DNAJC9-AS1A6NH13 148 aa11.35□□□□□ -0.59
CLSTN1-201ENST00000361311 ZNF73O43830 326 aaPredicted RBP11.34□□□□□ -0.59
CLSTN1-201ENST00000361311 Q6ZVQ6 151 aa11.34□□□□□ -0.59
CLSTN1-201ENST00000361311 EIF4EBP3O60516 100 aaPredicted RBP11.33□□□□□ -0.6
CLSTN1-201ENST00000361311 TRBV10-3A0A0K0K1G6 114 aa11.33□□□□□ -0.6
CLSTN1-201ENST00000361311 C9orf66Q5T8R8 295 aa11.33□□□□□ -0.6
CLSTN1-201ENST00000361311 SPTSSBQ8NFR3 76 aa11.33□□□□□ -0.6
CLSTN1-201ENST00000361311 LYRM9A8MSI8 78 aa11.32□□□□□ -0.6
CLSTN1-201ENST00000361311 UNQ6190/PRO20217Q6UXQ8 127 aa11.32□□□□□ -0.6
CLSTN1-201ENST00000361311 IGHV4-31P0DP07 118 aa11.32□□□□□ -0.6
CLSTN1-201ENST00000361311 LINC01547P58512 204 aaPredicted RBP11.32□□□□□ -0.6
CLSTN1-201ENST00000361311 PRR4Q16378 134 aa11.32□□□□□ -0.6
CLSTN1-201ENST00000361311 PRO0628Q9UI54 55 aa11.32□□□□□ -0.6
CLSTN1-201ENST00000361311 C11orf72Q8NBR9 251 aa11.32□□□□□ -0.6
CLSTN1-201ENST00000361311 ACANP16112 2415 aa11.32□□□□□ -0.6
CLSTN1-201ENST00000361311 CYSRT1A8MQ03 144 aa11.31□□□□□ -0.6
CLSTN1-201ENST00000361311 COL27A1Q8IZC6 1860 aaPredicted RBP11.3□□□□□ -0.6
CLSTN1-201ENST00000361311 CELA1Q9UNI1 258 aa11.3□□□□□ -0.6
CLSTN1-201ENST00000361311 NDUFS5O43920 106 aa11.29□□□□□ -0.6
CLSTN1-201ENST00000361311 KLK9Q2XQG4 91 aa11.29□□□□□ -0.6
CLSTN1-201ENST00000361311 IGHV3OR16-9A0A0B4J2B5 98 aa11.29□□□□□ -0.6
CLSTN1-201ENST00000361311 UBE2DNLQ8IWF7 75 aa11.29□□□□□ -0.6
CLSTN1-201ENST00000361311 UNC80Q8N2C7 3258 aa11.29□□□□□ -0.6
CLSTN1-201ENST00000361311 MUC7Q8TAX7 377 aa11.29□□□□□ -0.6
CLSTN1-201ENST00000361311 TMEM254Q8TBM7 123 aa11.29□□□□□ -0.6
CLSTN1-201ENST00000361311 ZNF575Q86XF7 245 aa11.28□□□□□ -0.6
CLSTN1-201ENST00000361311 A8MTW9 85 aa11.28□□□□□ -0.6
CLSTN1-201ENST00000361311 PLA2G2AP14555 144 aa11.28□□□□□ -0.6
CLSTN1-201ENST00000361311 LINC00575Q6W349 94 aa11.28□□□□□ -0.6
CLSTN1-201ENST00000361311 LAMA3Q16787 3333 aa11.28□□□□□ -0.6
CLSTN1-201ENST00000361311 TRBV7-6A0A0J9YX20 115 aa11.28□□□□□ -0.6
CLSTN1-201ENST00000361311 LRCOL1A6NCL2 159 aa11.28□□□□□ -0.6
CLSTN1-201ENST00000361311 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.27□□□□□ -0.6
CLSTN1-201ENST00000361311 M0R378 163 aa11.27□□□□□ -0.61
CLSTN1-201ENST00000361311 PRYO14603 147 aa11.27□□□□□ -0.61
CLSTN1-201ENST00000361311 FAM30AQ9NZY2 134 aa11.26□□□□□ -0.61
CLSTN1-201ENST00000361311 NDUFB1O75438 58 aa11.26□□□□□ -0.61
CLSTN1-201ENST00000361311 FHL2Q14192 279 aa11.26□□□□□ -0.61
CLSTN1-201ENST00000361311 MRPL55Q7Z7F7 128 aaKnown RBP11.26□□□□□ -0.61
CLSTN1-201ENST00000361311 IGKV2-28A0A075B6P5 120 aa11.24□□□□□ -0.61
CLSTN1-201ENST00000361311 IGKV2D-28P01615 120 aa11.24□□□□□ -0.61
CLSTN1-201ENST00000361311 TRANK1O15050 2925 aa11.24□□□□□ -0.61
CLSTN1-201ENST00000361311 LINC00482Q8N8I6 264 aa11.23□□□□□ -0.61
CLSTN1-201ENST00000361311 LINC01006Q8NI28 216 aa11.23□□□□□ -0.61
CLSTN1-201ENST00000361311 INAFM1C9JVW0 142 aa11.22□□□□□ -0.61
CLSTN1-201ENST00000361311 CXCL6P80162 114 aa11.21□□□□□ -0.61
CLSTN1-201ENST00000361311 LINC01561Q8N1V8 128 aa11.21□□□□□ -0.61
CLSTN1-201ENST00000361311 WFDC10BQ8IUB3 73 aa11.21□□□□□ -0.62
CLSTN1-201ENST00000361311 HECTD1Q9ULT8 2610 aa11.21□□□□□ -0.62
CLSTN1-201ENST00000361311 BCE1O60756 84 aa11.2□□□□□ -0.62
CLSTN1-201ENST00000361311 A0A1B0GUV1 79 aa11.2□□□□□ -0.62
CLSTN1-201ENST00000361311 LELP1Q5T871 98 aa11.2□□□□□ -0.62
CLSTN1-201ENST00000361311 WFDC13Q8IUB5 93 aa11.2□□□□□ -0.62
CLSTN1-201ENST00000361311 SYCNQ0VAF6 134 aa11.2□□□□□ -0.62
CLSTN1-201ENST00000361311 H0Y9J4 135 aa11.2□□□□□ -0.62
CLSTN1-201ENST00000361311 HIGD2AQ9BW72 106 aa11.19□□□□□ -0.62
CLSTN1-201ENST00000361311 C6orf223Q8N319 242 aa11.18□□□□□ -0.62
CLSTN1-201ENST00000361311 ESRGQ1W209 222 aa11.18□□□□□ -0.62
CLSTN1-201ENST00000361311 Q8N9L7 120 aa11.17□□□□□ -0.62
CLSTN1-201ENST00000361311 DHRS4-AS1Q9P1J3 65 aa11.16□□□□□ -0.62
CLSTN1-201ENST00000361311 KRTAP10-9P60411 292 aa11.15□□□□□ -0.62
CLSTN1-201ENST00000361311 SPATA3Q8NHX4 192 aa11.15□□□□□ -0.62
CLSTN1-201ENST00000361311 LINC01600Q96MT4 127 aa11.15□□□□□ -0.62
CLSTN1-201ENST00000361311 CHKB-CPT1BH3BT56 60 aa11.14□□□□□ -0.63
CLSTN1-201ENST00000361311 TRAV10A0A0B4J240 114 aa11.14□□□□□ -0.63
CLSTN1-201ENST00000361311 PSPHP1O15172 72 aa11.13□□□□□ -0.63
CLSTN1-201ENST00000361311 Q6ZQT0 140 aa11.13□□□□□ -0.63
CLSTN1-201ENST00000361311 LY6G6DO95868 133 aa11.12□□□□□ -0.63
CLSTN1-201ENST00000361311 NANOS2P60321 138 aaKnown RBP11.12□□□□□ -0.63
CLSTN1-201ENST00000361311 EGFEM1PQ0D2K5 195 aa11.12□□□□□ -0.63
CLSTN1-201ENST00000361311 A6NED7 52 aa11.12□□□□□ -0.63
CLSTN1-201ENST00000361311 UBE2AP49459 152 aa11.12□□□□□ -0.63
CLSTN1-201ENST00000361311 PMAIP1Q13794 54 aa11.12□□□□□ -0.63
CLSTN1-201ENST00000361311 IGKV2-24A0A0C4DH68 120 aa11.11□□□□□ -0.63
CLSTN1-201ENST00000361311 RPL37AP8A6NKH3 93 aa11.11□□□□□ -0.63
CLSTN1-201ENST00000361311 IGLV1-51P01701 117 aa11.11□□□□□ -0.63
CLSTN1-201ENST00000361311 C1orf137Q5JT78 98 aa11.11□□□□□ -0.63
CLSTN1-201ENST00000361311 A0A096LNI7 61 aa11.11□□□□□ -0.63
CLSTN1-201ENST00000361311 F8P00451 2351 aa11.1□□□□□ -0.63
CLSTN1-201ENST00000361311 TM2D3Q9BRN9 247 aa11.1□□□□□ -0.63
CLSTN1-201ENST00000361311 TRIOO75962 3097 aa11.08□□□□□ -0.64
CLSTN1-201ENST00000361311 LINC00208Q96KT6 92 aa11.08□□□□□ -0.64
CLSTN1-201ENST00000361311 ANKRD17O75179 2603 aaKnown RBP11.08□□□□□ -0.64
CLSTN1-201ENST00000361311 C2orf48Q96LS8 159 aa11.07□□□□□ -0.64
CLSTN1-201ENST00000361311 LOC110117498A0A087WWA1 95 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms