RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 TMEM126AQ9H061 195 aa6.13□□□□□ -1.43
UPF2-202ENST00000357604 ZZEF1O43149 2961 aa6.13□□□□□ -1.43
UPF2-202ENST00000357604 A4D1N5 150 aa6.13□□□□□ -1.43
UPF2-202ENST00000357604 RPL37AP61513 92 aaKnown RBP6.13□□□□□ -1.43
UPF2-202ENST00000357604 C2orf82Q6UX34 121 aa6.13□□□□□ -1.43
UPF2-202ENST00000357604 UNQ6190/PRO20217Q6UXQ8 127 aa6.13□□□□□ -1.43
UPF2-202ENST00000357604 LINC00173Q6ZV60 143 aa6.13□□□□□ -1.43
UPF2-202ENST00000357604 AGRNO00468 2067 aa6.13□□□□□ -1.43
UPF2-202ENST00000357604 C14orf144Q96I85 54 aa6.12□□□□□ -1.43
UPF2-202ENST00000357604 IGLV5-45A0A087WSX0 123 aa6.12□□□□□ -1.43
UPF2-202ENST00000357604 TSPAN13O95857 204 aa6.12□□□□□ -1.43
UPF2-202ENST00000357604 Q6ZR54 194 aa6.12□□□□□ -1.43
UPF2-202ENST00000357604 Q8N3U1 123 aa6.12□□□□□ -1.43
UPF2-202ENST00000357604 SPANXCQ9NY87 97 aa6.12□□□□□ -1.43
UPF2-202ENST00000357604 IGHV3OR16-9A0A0B4J2B5 98 aa6.11□□□□□ -1.43
UPF2-202ENST00000357604 PRO1933Q9H354 126 aa6.11□□□□□ -1.43
UPF2-202ENST00000357604 TNP2Q05952 138 aa6.11□□□□□ -1.43
UPF2-202ENST00000357604 Q6ZRP5 223 aa6.11□□□□□ -1.43
UPF2-202ENST00000357604 LINC00526Q96FQ7 95 aa6.11□□□□□ -1.43
UPF2-202ENST00000357604 Q9UF83 564 aa6.11□□□□□ -1.43
UPF2-202ENST00000357604 GAGE10A6NGK3 116 aa6.1□□□□□ -1.43
UPF2-202ENST00000357604 PRYO14603 147 aa6.1□□□□□ -1.43
UPF2-202ENST00000357604 LAMA5O15230 3695 aa6.1□□□□□ -1.43
UPF2-202ENST00000357604 DLEU1O43261 78 aa6.1□□□□□ -1.43
UPF2-202ENST00000357604 COX7BP24311 80 aa6.1□□□□□ -1.43
UPF2-202ENST00000357604 C1orf137Q5JT78 98 aa6.1□□□□□ -1.43
UPF2-202ENST00000357604 MRPL55Q7Z7F7 128 aaKnown RBP6.1□□□□□ -1.43
UPF2-202ENST00000357604 MTURNQ8N3F0 131 aa6.1□□□□□ -1.43
UPF2-202ENST00000357604 ITPR2Q14571 2701 aa6.1□□□□□ -1.43
UPF2-202ENST00000357604 LOC400499M0QZD8 3231 aa6.1□□□□□ -1.43
UPF2-202ENST00000357604 NSD1Q96L73 2696 aaPredicted RBP6.1□□□□□ -1.43
UPF2-202ENST00000357604 DHRS4-AS1Q9P1J3 65 aa6.1□□□□□ -1.43
UPF2-202ENST00000357604 TEX15Q9BXT5 2789 aa6.09□□□□□ -1.43
UPF2-202ENST00000357604 COL12A1Q99715 3063 aa6.09□□□□□ -1.43
UPF2-202ENST00000357604 LOC107984156A0A0G2JMH3 177 aa6.09□□□□□ -1.43
UPF2-202ENST00000357604 ARL17AQ8IVW1 177 aa6.09□□□□□ -1.43
UPF2-202ENST00000357604 SNHG12Q9BXW3 62 aa6.09□□□□□ -1.43
UPF2-202ENST00000357604 CELSR3Q9NYQ7 3312 aa6.09□□□□□ -1.43
UPF2-202ENST00000357604 IGKV2D-26A0A0A0MRZ7 120 aa6.09□□□□□ -1.43
UPF2-202ENST00000357604 C9orf163Q8N9P6 203 aa6.08□□□□□ -1.44
UPF2-202ENST00000357604 XAGE1AQ9HD64 81 aa6.08□□□□□ -1.44
UPF2-202ENST00000357604 IGLV5-39A0A0G2JS06 123 aa6.08□□□□□ -1.44
UPF2-202ENST00000357604 HIGD1BQ9P298 99 aa6.08□□□□□ -1.44
UPF2-202ENST00000357604 TRBV10-2A0A0K0K1G8 114 aa6.08□□□□□ -1.44
UPF2-202ENST00000357604 FABP2P12104 132 aa6.08□□□□□ -1.44
UPF2-202ENST00000357604 TLX1NBP0CAT3 122 aa6.08□□□□□ -1.44
UPF2-202ENST00000357604 H0YGX0 51 aa6.07□□□□□ -1.44
UPF2-202ENST00000357604 CEND1Q8N111 149 aa6.07□□□□□ -1.44
UPF2-202ENST00000357604 C15orf56Q8N910 161 aa6.07□□□□□ -1.44
UPF2-202ENST00000357604 OTOGQ6ZRI0 2925 aa6.07□□□□□ -1.44
UPF2-202ENST00000357604 ASPMQ8IZT6 3477 aa6.07□□□□□ -1.44
UPF2-202ENST00000357604 C9orf116Q5BN46 136 aaPredicted RBP6.07□□□□□ -1.44
UPF2-202ENST00000357604 GTF2H5Q6ZYL4 71 aa6.07□□□□□ -1.44
UPF2-202ENST00000357604 TRAV23DV6A0A075B6W5 121 aa6.07□□□□□ -1.44
UPF2-202ENST00000357604 CDK2AP2O75956 126 aa6.07□□□□□ -1.44
UPF2-202ENST00000357604 MUSTN1Q8IVN3 82 aa6.07□□□□□ -1.44
UPF2-202ENST00000357604 URB1-AS1Q96HZ7 61 aa6.07□□□□□ -1.44
UPF2-202ENST00000357604 LAMTOR3Q9UHA4 124 aa6.07□□□□□ -1.44
UPF2-202ENST00000357604 LRCOL1A6NCL2 159 aa6.06□□□□□ -1.44
UPF2-202ENST00000357604 NDUFC2O95298 119 aa6.06□□□□□ -1.44
UPF2-202ENST00000357604 C6orf48Q9UBA6 75 aa6.06□□□□□ -1.44
UPF2-202ENST00000357604 TP73-AS1Q9UF72 201 aa6.06□□□□□ -1.44
UPF2-202ENST00000357604 EPM2AB3EWF7 344 aa6.05□□□□□ -1.44
UPF2-202ENST00000357604 NBPF19A0A087WUL8 3843 aa6.05□□□□□ -1.44
UPF2-202ENST00000357604 CENPEQ02224 2701 aa6.05□□□□□ -1.44
UPF2-202ENST00000357604 ATXN8Q156A1 80 aa6.05□□□□□ -1.44
UPF2-202ENST00000357604 LINC00308Q8TCZ7 52 aa6.05□□□□□ -1.44
UPF2-202ENST00000357604 A0A1B0GWB2 263 aa6.05□□□□□ -1.44
UPF2-202ENST00000357604 J3QR89 54 aa6.04□□□□□ -1.44
UPF2-202ENST00000357604 C22orf24Q9Y442 160 aa6.04□□□□□ -1.44
UPF2-202ENST00000357604 J3QL48 77 aa6.04□□□□□ -1.44
UPF2-202ENST00000357604 MAST4O15021 2626 aa6.04□□□□□ -1.44
UPF2-202ENST00000357604 PRO1854Q9UHT4 67 aa6.04□□□□□ -1.44
UPF2-202ENST00000357604 TEP1Q99973 2627 aaKnown RBP6.03□□□□□ -1.44
UPF2-202ENST00000357604 C9orf153Q5TBE3 101 aa6.03□□□□□ -1.44
UPF2-202ENST00000357604 DAND5Q8N907 189 aa6.03□□□□□ -1.44
UPF2-202ENST00000357604 COL5A1-AS1Q5SY13 56 aa6.03□□□□□ -1.44
UPF2-202ENST00000357604 HIGD2AQ9BW72 106 aa6.03□□□□□ -1.44
UPF2-202ENST00000357604 A0A096LNJ9 63 aa6.03□□□□□ -1.44
UPF2-202ENST00000357604 ANKRD39Q53RE8 183 aa6.03□□□□□ -1.44
UPF2-202ENST00000357604 PLA2G2DQ9UNK4 145 aa6.03□□□□□ -1.44
UPF2-202ENST00000357604 LRBAP50851 2863 aa6.02□□□□□ -1.44
UPF2-202ENST00000357604 OCIAD2Q56VL3 154 aa6.02□□□□□ -1.45
UPF2-202ENST00000357604 MAPKAPK5-AS1Q8N8E1 139 aa6.02□□□□□ -1.45
UPF2-202ENST00000357604 CELSR2Q9HCU4 2923 aa6.02□□□□□ -1.45
UPF2-202ENST00000357604 RPL37AP8A6NKH3 93 aa6.02□□□□□ -1.45
UPF2-202ENST00000357604 PCP2Q8IVA1 136 aa6.02□□□□□ -1.45
UPF2-202ENST00000357604 LINC00528Q8N1L1 170 aa6.02□□□□□ -1.45
UPF2-202ENST00000357604 IGKV2-28A0A075B6P5 120 aa6.02□□□□□ -1.45
UPF2-202ENST00000357604 IGKV2D-28P01615 120 aa6.02□□□□□ -1.45
UPF2-202ENST00000357604 A0A096LNI7 61 aa6.01□□□□□ -1.45
UPF2-202ENST00000357604 CTAG1AP78358 180 aa6.01□□□□□ -1.45
UPF2-202ENST00000357604 ATRQ13535 2644 aa6.01□□□□□ -1.45
UPF2-202ENST00000357604 CFAP47Q6ZTR5 3102 aa6□□□□□ -1.45
UPF2-202ENST00000357604 A0A0B4J2C4 111 aa6□□□□□ -1.45
UPF2-202ENST00000357604 INAFM2P0DMQ5 153 aa6□□□□□ -1.45
UPF2-202ENST00000357604 ZNF73O43830 326 aaPredicted RBP6□□□□□ -1.45
UPF2-202ENST00000357604 XGP55808 180 aa6□□□□□ -1.45
UPF2-202ENST00000357604 DEFB105AQ8NG35 78 aa5.99□□□□□ -1.45
UPF2-202ENST00000357604 ORMDL1Q9P0S3 153 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms