RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 IGIPA6NJ69 53 aa10.3□□□□□ -0.76
PDLIM7-201ENST00000355572 AKR1D1P51857 326 aa10.3□□□□□ -0.76
PDLIM7-201ENST00000355572 RNF151Q2KHN1 245 aa10.3□□□□□ -0.76
PDLIM7-201ENST00000355572 C2orf82Q6UX34 121 aa10.3□□□□□ -0.76
PDLIM7-201ENST00000355572 LINC01600Q96MT4 127 aa10.29□□□□□ -0.76
PDLIM7-201ENST00000355572 PLA2G2DQ9UNK4 145 aa10.29□□□□□ -0.76
PDLIM7-201ENST00000355572 CYSLTR1Q9Y271 337 aa10.29□□□□□ -0.76
PDLIM7-201ENST00000355572 PKIGQ9Y2B9 76 aa10.29□□□□□ -0.76
PDLIM7-201ENST00000355572 NDUFA1O15239 70 aa10.28□□□□□ -0.76
PDLIM7-201ENST00000355572 ALKBH7Q9BT30 221 aaPredicted RBP10.28□□□□□ -0.76
PDLIM7-201ENST00000355572 PSORS1C2Q9UIG4 136 aa10.28□□□□□ -0.76
PDLIM7-201ENST00000355572 TEX43Q6ZNM6 134 aa10.27□□□□□ -0.77
PDLIM7-201ENST00000355572 BAGE3Q86Y29 109 aa10.27□□□□□ -0.77
PDLIM7-201ENST00000355572 HIST1H2BLQ99880 126 aa10.27□□□□□ -0.77
PDLIM7-201ENST00000355572 TLX1NBP0CAT3 122 aa10.26□□□□□ -0.77
PDLIM7-201ENST00000355572 LINC00518Q8N0U6 118 aa10.26□□□□□ -0.77
PDLIM7-201ENST00000355572 C18orf32Q8TCD1 76 aa10.26□□□□□ -0.77
PDLIM7-201ENST00000355572 GAGE2EQ4V326 116 aa10.25□□□□□ -0.77
PDLIM7-201ENST00000355572 SPINK6Q6UWN8 80 aa10.25□□□□□ -0.77
PDLIM7-201ENST00000355572 FAM19A3Q7Z5A8 133 aa10.25□□□□□ -0.77
PDLIM7-201ENST00000355572 GAGE2DQ9UEU5 116 aa10.25□□□□□ -0.77
PDLIM7-201ENST00000355572 SERF1AO75920 110 aa10.24□□□□□ -0.77
PDLIM7-201ENST00000355572 FABP4P15090 132 aa10.24□□□□□ -0.77
PDLIM7-201ENST00000355572 LINC00310P59036 64 aa10.24□□□□□ -0.77
PDLIM7-201ENST00000355572 KRTAP10-8P60410 259 aa10.24□□□□□ -0.77
PDLIM7-201ENST00000355572 ORMDL2Q53FV1 153 aa10.24□□□□□ -0.77
PDLIM7-201ENST00000355572 F8WDY8 70 aa10.23□□□□□ -0.77
PDLIM7-201ENST00000355572 C9orf129Q5T035 196 aaKnown RBP10.23□□□□□ -0.77
PDLIM7-201ENST00000355572 FAM19A5Q7Z5A7 132 aaPredicted RBP10.23□□□□□ -0.77
PDLIM7-201ENST00000355572 TOMM6Q96B49 74 aa10.23□□□□□ -0.77
PDLIM7-201ENST00000355572 CHCHD1Q96BP2 118 aaKnown RBP10.23□□□□□ -0.77
PDLIM7-201ENST00000355572 NXT2Q9NPJ8 142 aaKnown RBP10.23□□□□□ -0.77
PDLIM7-201ENST00000355572 PDZD11Q5EBL8 140 aa10.22□□□□□ -0.77
PDLIM7-201ENST00000355572 VCX2Q9H322 139 aa10.22□□□□□ -0.77
PDLIM7-201ENST00000355572 CDKN2A-AS1Q9UH64 79 aa10.22□□□□□ -0.77
PDLIM7-201ENST00000355572 C2orf88Q9BSF0 95 aa10.21□□□□□ -0.77
PDLIM7-201ENST00000355572 UBR4Q5T4S7 5183 aa10.2□□□□□ -0.78
PDLIM7-201ENST00000355572 LINC01546A6NGU7 62 aa10.2□□□□□ -0.78
PDLIM7-201ENST00000355572 K7EMI3 77 aa10.2□□□□□ -0.78
PDLIM7-201ENST00000355572 C1orf137Q5JT78 98 aa10.2□□□□□ -0.78
PDLIM7-201ENST00000355572 Q6ZN92 141 aa10.2□□□□□ -0.78
PDLIM7-201ENST00000355572 LINC01561Q8N1V8 128 aa10.2□□□□□ -0.78
PDLIM7-201ENST00000355572 C12orf57Q99622 126 aa10.2□□□□□ -0.78
PDLIM7-201ENST00000355572 TOMM7Q9P0U1 55 aa10.2□□□□□ -0.78
PDLIM7-201ENST00000355572 TRBV30A0A0K0K1B3 111 aa10.19□□□□□ -0.78
PDLIM7-201ENST00000355572 TIMM17AQ99595 171 aa10.19□□□□□ -0.78
PDLIM7-201ENST00000355572 HSBP1O75506 76 aa10.18□□□□□ -0.78
PDLIM7-201ENST00000355572 NPSP0C0P6 89 aa10.18□□□□□ -0.78
PDLIM7-201ENST00000355572 JOSD1Q15040 202 aaPredicted RBP10.18□□□□□ -0.78
PDLIM7-201ENST00000355572 URB1-AS1Q96HZ7 61 aa10.18□□□□□ -0.78
PDLIM7-201ENST00000355572 NUPR1O60356 82 aa10.17□□□□□ -0.78
PDLIM7-201ENST00000355572 PYY3Q5JQD4 70 aa10.17□□□□□ -0.78
PDLIM7-201ENST00000355572 LINC00469Q8N7U9 141 aa10.17□□□□□ -0.78
PDLIM7-201ENST00000355572 NDUFC2-KCTD14E9PQ53 114 aa10.16□□□□□ -0.78
PDLIM7-201ENST00000355572 IGLV7-43P04211 117 aa10.16□□□□□ -0.78
PDLIM7-201ENST00000355572 REG3GQ6UW15 175 aa10.16□□□□□ -0.78
PDLIM7-201ENST00000355572 Q8IZM0 81 aa10.16□□□□□ -0.78
PDLIM7-201ENST00000355572 SCGB3A1Q96QR1 104 aa10.16□□□□□ -0.78
PDLIM7-201ENST00000355572 A0A096LNJ9 63 aa10.15□□□□□ -0.78
PDLIM7-201ENST00000355572 SMIM1B2RUZ4 78 aa10.15□□□□□ -0.78
PDLIM7-201ENST00000355572 M0QXV9 152 aa10.15□□□□□ -0.78
PDLIM7-201ENST00000355572 LINC00614P0C842 121 aa10.15□□□□□ -0.78
PDLIM7-201ENST00000355572 ERASQ7Z444 233 aa10.15□□□□□ -0.78
PDLIM7-201ENST00000355572 HERVK_113P63121 156 aa10.14□□□□□ -0.79
PDLIM7-201ENST00000355572 XAGE1AQ9HD64 81 aa10.14□□□□□ -0.79
PDLIM7-201ENST00000355572 IGLV5-45A0A087WSX0 123 aa10.13□□□□□ -0.79
PDLIM7-201ENST00000355572 FA2HQ7L5A8 372 aa10.13□□□□□ -0.79
PDLIM7-201ENST00000355572 PRSS2P07478 247 aa10.12□□□□□ -0.79
PDLIM7-201ENST00000355572 C6orf226Q5I0X4 101 aa10.12□□□□□ -0.79
PDLIM7-201ENST00000355572 CST9LQ9H4G1 147 aa10.12□□□□□ -0.79
PDLIM7-201ENST00000355572 GEMIN7Q9H840 131 aaKnown RBP10.12□□□□□ -0.79
PDLIM7-201ENST00000355572 LRP2P98164 4655 aa10.12□□□□□ -0.79
PDLIM7-201ENST00000355572 CKS1BP61024 79 aa10.11□□□□□ -0.79
PDLIM7-201ENST00000355572 S100A12P80511 92 aa10.11□□□□□ -0.79
PDLIM7-201ENST00000355572 TINCRA0A1B0GVN0 87 aa10.1□□□□□ -0.79
PDLIM7-201ENST00000355572 KRTAP1-4P0C5Y4 121 aa10.1□□□□□ -0.79
PDLIM7-201ENST00000355572 SPINK8P0C7L1 97 aa10.1□□□□□ -0.79
PDLIM7-201ENST00000355572 PRR26Q8N8Z3 221 aa10.1□□□□□ -0.79
PDLIM7-201ENST00000355572 PMCHL1Q16048 86 aa10.09□□□□□ -0.79
PDLIM7-201ENST00000355572 PAPPA-AS1Q5QFB9 102 aa10.09□□□□□ -0.79
PDLIM7-201ENST00000355572 HSPB8Q9UJY1 196 aa10.09□□□□□ -0.79
PDLIM7-201ENST00000355572 F8VRH5 84 aa10.08□□□□□ -0.8
PDLIM7-201ENST00000355572 H0Y9J4 135 aa10.08□□□□□ -0.8
PDLIM7-201ENST00000355572 UBE2BP63146 152 aa10.08□□□□□ -0.8
PDLIM7-201ENST00000355572 SEC11AP67812 179 aa10.08□□□□□ -0.8
PDLIM7-201ENST00000355572 COX7B2Q8TF08 81 aa10.08□□□□□ -0.8
PDLIM7-201ENST00000355572 C22orf24Q9Y442 160 aa10.08□□□□□ -0.8
PDLIM7-201ENST00000355572 LEPROTL1O95214 131 aa10.07□□□□□ -0.8
PDLIM7-201ENST00000355572 G0S2P27469 103 aa10.07□□□□□ -0.8
PDLIM7-201ENST00000355572 PMVKQ15126 192 aa10.07□□□□□ -0.8
PDLIM7-201ENST00000355572 FAM19A2Q8N3H0 131 aa10.07□□□□□ -0.8
PDLIM7-201ENST00000355572 HBDP02042 147 aa10.06□□□□□ -0.8
PDLIM7-201ENST00000355572 C3orf79P0CE67 100 aa10.05□□□□□ -0.8
PDLIM7-201ENST00000355572 KRTDAPP60985 99 aa10.05□□□□□ -0.8
PDLIM7-201ENST00000355572 DIRC1Q969H9 104 aa10.05□□□□□ -0.8
PDLIM7-201ENST00000355572 C20orf202A1L168 122 aa10.04□□□□□ -0.8
PDLIM7-201ENST00000355572 LINC01549A6NIU2 74 aa10.04□□□□□ -0.8
PDLIM7-201ENST00000355572 SCGB1D1O95968 90 aa10.04□□□□□ -0.8
PDLIM7-201ENST00000355572 IGLC3P0DOY3 106 aa10.03□□□□□ -0.8
PDLIM7-201ENST00000355572 ZNF22P17026 224 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms