RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 FAM236DA0A1B0GTK5 79 aa5.22□□□□□ -1.57
ATXN3-201ENST00000340660 RGS5O15539 181 aa5.22□□□□□ -1.57
ATXN3-201ENST00000340660 FAM236CP0DP71 79 aa5.22□□□□□ -1.57
ATXN3-201ENST00000340660 IL15RAQ13261 267 aa5.22□□□□□ -1.57
ATXN3-201ENST00000340660 ATP11AUNQ6ZP68 121 aa5.22□□□□□ -1.57
ATXN3-201ENST00000340660 FAM104AQ969W3 186 aa5.22□□□□□ -1.57
ATXN3-201ENST00000340660 TMEM167BQ9NRX6 74 aa5.22□□□□□ -1.57
ATXN3-201ENST00000340660 GAGE2AQ6NT46 116 aa5.21□□□□□ -1.58
ATXN3-201ENST00000340660 Q6ZVH6 145 aa5.21□□□□□ -1.58
ATXN3-201ENST00000340660 LIMD2Q9BT23 127 aa5.21□□□□□ -1.58
ATXN3-201ENST00000340660 RAB19A4D1S5 217 aa5.2□□□□□ -1.58
ATXN3-201ENST00000340660 NDUFB6O95139 128 aa5.19□□□□□ -1.58
ATXN3-201ENST00000340660 MT1BP07438 61 aa5.19□□□□□ -1.58
ATXN3-201ENST00000340660 FAM19A3Q7Z5A8 133 aa5.19□□□□□ -1.58
ATXN3-201ENST00000340660 RAB26Q9ULW5 256 aa5.19□□□□□ -1.58
ATXN3-201ENST00000340660 TRBV6-5A0A0K0K1A5 114 aa5.18□□□□□ -1.58
ATXN3-201ENST00000340660 INMT-MINDY4F8WBC2 141 aa5.18□□□□□ -1.58
ATXN3-201ENST00000340660 SMCR5Q8TEV8 140 aa5.18□□□□□ -1.58
ATXN3-201ENST00000340660 LITAFQ99732 161 aa5.18□□□□□ -1.58
ATXN3-201ENST00000340660 TGIF2-C20orf24A0A0A6YYL0 155 aa5.17□□□□□ -1.58
ATXN3-201ENST00000340660 CKS1BP61024 79 aa5.17□□□□□ -1.58
ATXN3-201ENST00000340660 TOMM5Q8N4H5 51 aa5.17□□□□□ -1.58
ATXN3-201ENST00000340660 SCGB1C1Q8TD33 95 aa5.17□□□□□ -1.58
ATXN3-201ENST00000340660 MED9Q9NWA0 146 aa5.17□□□□□ -1.58
ATXN3-201ENST00000340660 FXYD6-FXYD2A0A087WZ82 144 aa5.16□□□□□ -1.58
ATXN3-201ENST00000340660 CXorf1O96002 111 aa5.16□□□□□ -1.58
ATXN3-201ENST00000340660 HRCT1Q6UXD1 115 aa5.16□□□□□ -1.58
ATXN3-201ENST00000340660 DEDD2Q8WXF8 326 aa5.16□□□□□ -1.58
ATXN3-201ENST00000340660 FAM74A7A6NL05 159 aa5.15□□□□□ -1.59
ATXN3-201ENST00000340660 IFNA1P01562 189 aa5.15□□□□□ -1.59
ATXN3-201ENST00000340660 FHITP49789 147 aa5.15□□□□□ -1.59
ATXN3-201ENST00000340660 AP3S2P59780 193 aa5.15□□□□□ -1.59
ATXN3-201ENST00000340660 C9orf153Q5TBE3 101 aa5.15□□□□□ -1.59
ATXN3-201ENST00000340660 TOMM7Q9P0U1 55 aa5.15□□□□□ -1.59
ATXN3-201ENST00000340660 POLR2KP53803 58 aaKnown RBP5.14□□□□□ -1.59
ATXN3-201ENST00000340660 FAM210AQ96ND0 272 aa5.14□□□□□ -1.59
ATXN3-201ENST00000340660 FUNDC2Q9BWH2 189 aa5.14□□□□□ -1.59
ATXN3-201ENST00000340660 TRBV27A0A0K0K1C4 114 aa5.13□□□□□ -1.59
ATXN3-201ENST00000340660 SMAGPQ0VAQ4 97 aa5.13□□□□□ -1.59
ATXN3-201ENST00000340660 Q75L30 129 aa5.13□□□□□ -1.59
ATXN3-201ENST00000340660 TIMM21Q9BVV7 248 aa5.13□□□□□ -1.59
ATXN3-201ENST00000340660 SMIM3Q9BZL3 60 aa5.13□□□□□ -1.59
ATXN3-201ENST00000340660 A8MWP4 228 aa5.12□□□□□ -1.59
ATXN3-201ENST00000340660 F8VRH5 84 aa5.12□□□□□ -1.59
ATXN3-201ENST00000340660 AKR1C3P42330 323 aa5.12□□□□□ -1.59
ATXN3-201ENST00000340660 C6orf226Q5I0X4 101 aa5.12□□□□□ -1.59
ATXN3-201ENST00000340660 C1orf195Q5TG92 126 aa5.12□□□□□ -1.59
ATXN3-201ENST00000340660 AKAP14Q86UN6 197 aa5.12□□□□□ -1.59
ATXN3-201ENST00000340660 ST20Q9HBF5 79 aa5.12□□□□□ -1.59
ATXN3-201ENST00000340660 F2Z2F3 143 aa5.11□□□□□ -1.59
ATXN3-201ENST00000340660 VPREB1P12018 145 aa5.11□□□□□ -1.59
ATXN3-201ENST00000340660 TAGLN2P37802 199 aaKnown RBP5.11□□□□□ -1.59
ATXN3-201ENST00000340660 A0A0G2JQZ4 141 aa5.1□□□□□ -1.59
ATXN3-201ENST00000340660 TEX261Q6UWH6 196 aa5.1□□□□□ -1.59
ATXN3-201ENST00000340660 Q8IZM0 81 aa5.1□□□□□ -1.59
ATXN3-201ENST00000340660 NKX6-2Q9C056 277 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-201ENST00000340660 HBBP68871 147 aa5.09□□□□□ -1.59
ATXN3-201ENST00000340660 LINC01561Q8N1V8 128 aa5.09□□□□□ -1.59
ATXN3-201ENST00000340660 ERC2-IT1O76042 136 aa5.08□□□□□ -1.6
ATXN3-201ENST00000340660 FCER1GP30273 86 aa5.08□□□□□ -1.6
ATXN3-201ENST00000340660 BAGE2Q86Y30 109 aa5.08□□□□□ -1.6
ATXN3-201ENST00000340660 HSPB11Q9Y547 144 aa5.08□□□□□ -1.6
ATXN3-201ENST00000340660 RPL39P62891 51 aaKnown RBP5.07□□□□□ -1.6
ATXN3-201ENST00000340660 ZC2HC1BQ5TFG8 222 aa5.07□□□□□ -1.6
ATXN3-201ENST00000340660 Q8NDZ9 215 aa5.07□□□□□ -1.6
ATXN3-201ENST00000340660 ALKBH7Q9BT30 221 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-201ENST00000340660 CNFNQ9BYD5 112 aa5.07□□□□□ -1.6
ATXN3-201ENST00000340660 KRTAP8-1Q8IUC2 63 aa5.06□□□□□ -1.6
ATXN3-201ENST00000340660 NUDT15Q9NV35 164 aa5.06□□□□□ -1.6
ATXN3-201ENST00000340660 MRPS36P82909 103 aaKnown RBP5.05□□□□□ -1.6
ATXN3-201ENST00000340660 ZNF726P1Q15940 193 aa5.05□□□□□ -1.6
ATXN3-201ENST00000340660 NOTCH2NLQ7Z3S9 236 aa5.05□□□□□ -1.6
ATXN3-201ENST00000340660 C9orf62Q8N4C0 152 aa5.05□□□□□ -1.6
ATXN3-201ENST00000340660 STOML3Q8TAV4 291 aa5.05□□□□□ -1.6
ATXN3-201ENST00000340660 RAB5BP61020 215 aa5.04□□□□□ -1.6
ATXN3-201ENST00000340660 C10orf91Q5T1B1 145 aa5.04□□□□□ -1.6
ATXN3-201ENST00000340660 Q6ZN92 141 aa5.04□□□□□ -1.6
ATXN3-201ENST00000340660 ACTR3CQ9C0K3 210 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-201ENST00000340660 ATP6V0CP27449 155 aa5.03□□□□□ -1.6
ATXN3-201ENST00000340660 BTCP35070 178 aa5.03□□□□□ -1.6
ATXN3-201ENST00000340660 PYDC2Q56P42 97 aa5.03□□□□□ -1.6
ATXN3-201ENST00000340660 SEC22CQ9BRL7 303 aa5.03□□□□□ -1.6
ATXN3-201ENST00000340660 TCEAL7Q9BRU2 100 aa5.03□□□□□ -1.6
ATXN3-201ENST00000340660 H7C2G1 150 aa5.02□□□□□ -1.61
ATXN3-201ENST00000340660 VCYO14598 125 aa5.02□□□□□ -1.61
ATXN3-201ENST00000340660 SIX6O95475 246 aa5.02□□□□□ -1.61
ATXN3-201ENST00000340660 HRES1P13985 223 aa5.02□□□□□ -1.61
ATXN3-201ENST00000340660 Q1RN00 199 aa5.02□□□□□ -1.61
ATXN3-201ENST00000340660 Q5VV11 94 aa5.02□□□□□ -1.61
ATXN3-201ENST00000340660 RBM12B-AS1Q9P1G2 102 aa5.02□□□□□ -1.61
ATXN3-201ENST00000340660 LOC107984156A0A0G2JMH3 177 aa5.01□□□□□ -1.61
ATXN3-201ENST00000340660 CCDC160A6NGH7 325 aa5.01□□□□□ -1.61
ATXN3-201ENST00000340660 ARL17AQ8IVW1 177 aa5.01□□□□□ -1.61
ATXN3-201ENST00000340660 SPANXA1Q9NS26 97 aa5.01□□□□□ -1.61
ATXN3-201ENST00000340660 S100A9P06702 114 aaKnown RBP5□□□□□ -1.61
ATXN3-201ENST00000340660 CST9LP1Q5W188 147 aa5□□□□□ -1.61
ATXN3-201ENST00000340660 KRTAP16-1A8MUX0 517 aa4.99□□□□□ -1.61
ATXN3-201ENST00000340660 SMIM1B2RUZ4 78 aa4.99□□□□□ -1.61
ATXN3-201ENST00000340660 SPRR1AP35321 89 aa4.99□□□□□ -1.61
ATXN3-201ENST00000340660 RPL24P83731 157 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms