RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 EDN2P20800 178 aa7.03□□□□□ -1.28
COL4A6-201ENST00000334504 ZNF702PQ9H963 129 aa7.03□□□□□ -1.28
COL4A6-201ENST00000334504 NUP210LQ5VU65 1888 aa7.03□□□□□ -1.28
COL4A6-201ENST00000334504 C6orf223Q8N319 242 aa7.02□□□□□ -1.28
COL4A6-201ENST00000334504 Q8NA96 180 aa7.02□□□□□ -1.28
COL4A6-201ENST00000334504 A0A1B0GU69 56 aa7.02□□□□□ -1.29
COL4A6-201ENST00000334504 FSHBP01225 129 aa7.02□□□□□ -1.29
COL4A6-201ENST00000334504 SPG11Q96JI7 2443 aa7.02□□□□□ -1.29
COL4A6-201ENST00000334504 LINC00474Q9P2X8 69 aa7.02□□□□□ -1.29
COL4A6-201ENST00000334504 ALPK3Q96L96 1907 aa7.01□□□□□ -1.29
COL4A6-201ENST00000334504 LINC00337Q8N6G1 96 aa7□□□□□ -1.29
COL4A6-201ENST00000334504 PRO0461Q9UI25 63 aa7□□□□□ -1.29
COL4A6-201ENST00000334504 IGLV1-40P01703 118 aa7□□□□□ -1.29
COL4A6-201ENST00000334504 IGLV5-52A0A0A0MRZ9 124 aa7□□□□□ -1.29
COL4A6-201ENST00000334504 HCFC1P51610 2035 aa6.99□□□□□ -1.29
COL4A6-201ENST00000334504 CSPG4Q6UVK1 2322 aa6.98□□□□□ -1.29
COL4A6-201ENST00000334504 BCE1O60756 84 aa6.98□□□□□ -1.29
COL4A6-201ENST00000334504 Q6ZSN1 163 aa6.98□□□□□ -1.29
COL4A6-201ENST00000334504 FREM1Q5H8C1 2179 aa6.98□□□□□ -1.29
COL4A6-201ENST00000334504 CEP192Q8TEP8 1941 aa6.98□□□□□ -1.29
COL4A6-201ENST00000334504 SPATA3Q8NHX4 192 aa6.98□□□□□ -1.29
COL4A6-201ENST00000334504 PRLHP81277 87 aa6.97□□□□□ -1.29
COL4A6-201ENST00000334504 MED12LQ86YW9 2145 aa6.97□□□□□ -1.29
COL4A6-201ENST00000334504 WNK1Q9H4A3 2382 aa6.97□□□□□ -1.29
COL4A6-201ENST00000334504 C11orf71Q6IPW1 123 aa6.97□□□□□ -1.29
COL4A6-201ENST00000334504 BRI3O95415 125 aa6.97□□□□□ -1.29
COL4A6-201ENST00000334504 C7orf65Q6ZTY9 151 aa6.97□□□□□ -1.29
COL4A6-201ENST00000334504 C8orf87E5RJ46 101 aa6.97□□□□□ -1.29
COL4A6-201ENST00000334504 SPINT4Q6UDR6 99 aa6.96□□□□□ -1.29
COL4A6-201ENST00000334504 FHL2Q14192 279 aa6.96□□□□□ -1.3
COL4A6-201ENST00000334504 LINC01006Q8NI28 216 aa6.96□□□□□ -1.3
COL4A6-201ENST00000334504 ARHGAP32A7KAX9 2087 aa6.95□□□□□ -1.3
COL4A6-201ENST00000334504 Q6ZTC4 211 aa6.95□□□□□ -1.3
COL4A6-201ENST00000334504 COX8CQ7Z4L0 72 aa6.95□□□□□ -1.3
COL4A6-201ENST00000334504 EML5Q05BV3 1969 aa6.94□□□□□ -1.3
COL4A6-201ENST00000334504 FAM19A4Q96LR4 140 aa6.94□□□□□ -1.3
COL4A6-201ENST00000334504 ATG2AQ2TAZ0 1938 aa6.94□□□□□ -1.3
COL4A6-201ENST00000334504 PCNX3Q9H6A9 2034 aa6.94□□□□□ -1.3
COL4A6-201ENST00000334504 PLA2G1BP04054 148 aaKnown RBP6.94□□□□□ -1.3
COL4A6-201ENST00000334504 KIAA0087Q14695 138 aa6.94□□□□□ -1.3
COL4A6-201ENST00000334504 ACYP2P14621 99 aa6.94□□□□□ -1.3
COL4A6-201ENST00000334504 IGKV2D-30A0A075B6S6 120 aa6.94□□□□□ -1.3
COL4A6-201ENST00000334504 IGKV2-30P06310 120 aa6.94□□□□□ -1.3
COL4A6-201ENST00000334504 ATP11AUNQ6ZP68 121 aa6.94□□□□□ -1.3
COL4A6-201ENST00000334504 ODF3L2Q3SX64 289 aa6.93□□□□□ -1.3
COL4A6-201ENST00000334504 LINC01556Q5JQF7 62 aa6.93□□□□□ -1.3
COL4A6-201ENST00000334504 Q8N2B8 174 aa6.93□□□□□ -1.3
COL4A6-201ENST00000334504 CACNA1AO00555 2505 aa6.93□□□□□ -1.3
COL4A6-201ENST00000334504 FAM218AQ96MZ4 157 aa6.93□□□□□ -1.3
COL4A6-201ENST00000334504 LTBP2Q14767 1821 aa6.93□□□□□ -1.3
COL4A6-201ENST00000334504 PLXNB1O43157 2135 aa6.93□□□□□ -1.3
COL4A6-201ENST00000334504 PRO3102Q9H379 93 aa6.93□□□□□ -1.3
COL4A6-201ENST00000334504 DSCAMO60469 2012 aa6.92□□□□□ -1.3
COL4A6-201ENST00000334504 LINC01546A6NGU7 62 aa6.92□□□□□ -1.3
COL4A6-201ENST00000334504 TM2D3Q9BRN9 247 aa6.91□□□□□ -1.3
COL4A6-201ENST00000334504 C6orf48Q9UBA6 75 aa6.91□□□□□ -1.3
COL4A6-201ENST00000334504 Q6ZRU5 148 aa6.9□□□□□ -1.3
COL4A6-201ENST00000334504 LINC01561Q8N1V8 128 aa6.9□□□□□ -1.3
COL4A6-201ENST00000334504 C2orf48Q96LS8 159 aa6.9□□□□□ -1.31
COL4A6-201ENST00000334504 SMCR5Q8TEV8 140 aa6.9□□□□□ -1.31
COL4A6-201ENST00000334504 HIVEP3Q5T1R4 2406 aa6.89□□□□□ -1.31
COL4A6-201ENST00000334504 SORL1Q92673 2214 aa6.89□□□□□ -1.31
COL4A6-201ENST00000334504 F8WDY8 70 aa6.89□□□□□ -1.31
COL4A6-201ENST00000334504 IGLV8-61A0A075B6I0 122 aa6.89□□□□□ -1.31
COL4A6-201ENST00000334504 A0A1B0GUV1 79 aa6.89□□□□□ -1.31
COL4A6-201ENST00000334504 IGLV5-39A0A0G2JS06 123 aa6.89□□□□□ -1.31
COL4A6-201ENST00000334504 CD164Q04900 197 aa6.89□□□□□ -1.31
COL4A6-201ENST00000334504 Q6ZQT0 140 aa6.88□□□□□ -1.31
COL4A6-201ENST00000334504 TP53AIP1Q9HCN2 124 aa6.88□□□□□ -1.31
COL4A6-201ENST00000334504 C1orf134Q5TEV5 83 aa6.88□□□□□ -1.31
COL4A6-201ENST00000334504 COL5A1P20908 1838 aaPredicted RBP6.88□□□□□ -1.31
COL4A6-201ENST00000334504 PRR14LQ5THK1 2151 aa6.87□□□□□ -1.31
COL4A6-201ENST00000334504 A8MUN3 132 aa6.87□□□□□ -1.31
COL4A6-201ENST00000334504 C22orf24Q9Y442 160 aa6.87□□□□□ -1.31
COL4A6-201ENST00000334504 MYO18BQ8IUG5 2567 aa6.86□□□□□ -1.31
COL4A6-201ENST00000334504 KRTAP10-9P60411 292 aa6.86□□□□□ -1.31
COL4A6-201ENST00000334504 EXPH5Q8NEV8 1989 aa6.86□□□□□ -1.31
COL4A6-201ENST00000334504 J3QL48 77 aa6.86□□□□□ -1.31
COL4A6-201ENST00000334504 KIF25-AS1Q9Y6Z4 181 aa6.86□□□□□ -1.31
COL4A6-201ENST00000334504 MDFIQ99750 246 aa6.85□□□□□ -1.31
COL4A6-201ENST00000334504 H3BPC8 53 aa6.85□□□□□ -1.31
COL4A6-201ENST00000334504 PIEZO1Q92508 2521 aa6.85□□□□□ -1.31
COL4A6-201ENST00000334504 CCDC168Q8NDH2 2452 aa6.85□□□□□ -1.31
COL4A6-201ENST00000334504 ANKHD1Q8IWZ3 2542 aaKnown RBP6.85□□□□□ -1.31
COL4A6-201ENST00000334504 C11orf72Q8NBR9 251 aa6.85□□□□□ -1.31
COL4A6-201ENST00000334504 LOC110117498A0A087WWA1 95 aa6.84□□□□□ -1.31
COL4A6-201ENST00000334504 LYPD5Q6UWN5 251 aa6.84□□□□□ -1.31
COL4A6-201ENST00000334504 LINC00336Q6ZUF6 198 aa6.84□□□□□ -1.31
COL4A6-201ENST00000334504 SSBP3-AS1Q7Z2R9 100 aa6.83□□□□□ -1.32
COL4A6-201ENST00000334504 AVPP01185 164 aa6.83□□□□□ -1.32
COL4A6-201ENST00000334504 MUC4Q99102 2169 aa6.83□□□□□ -1.32
COL4A6-201ENST00000334504 IGLV1-51P01701 117 aa6.82□□□□□ -1.32
COL4A6-201ENST00000334504 RPL37AP61513 92 aaKnown RBP6.82□□□□□ -1.32
COL4A6-201ENST00000334504 RAI1Q7Z5J4 1906 aaPredicted RBP6.81□□□□□ -1.32
COL4A6-201ENST00000334504 PRRC2AP48634 2157 aaKnown RBP6.81□□□□□ -1.32
COL4A6-201ENST00000334504 TRAV22A0A0B4J277 110 aa6.81□□□□□ -1.32
COL4A6-201ENST00000334504 ELOF1P60002 83 aaKnown RBP6.81□□□□□ -1.32
COL4A6-201ENST00000334504 NHLRC4P0CG21 123 aaPredicted RBP6.81□□□□□ -1.32
COL4A6-201ENST00000334504 CYP4F30PQ9H0H9 118 aa6.81□□□□□ -1.32
COL4A6-201ENST00000334504 NCOR2Q9Y618 2525 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms