RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 HAMPP81172 84 aa16.64■□□□□ 0.25
SMDT1-201ENST00000331479 COX7B2Q8TF08 81 aa16.64■□□□□ 0.25
SMDT1-201ENST00000331479 C3orf79P0CE67 100 aa16.63■□□□□ 0.25
SMDT1-201ENST00000331479 XGP55808 180 aa16.63■□□□□ 0.25
SMDT1-201ENST00000331479 PANO1I0J062 215 aa16.62■□□□□ 0.25
SMDT1-201ENST00000331479 CDK2AP2O75956 126 aa16.62■□□□□ 0.25
SMDT1-201ENST00000331479 C6orf48Q9UBA6 75 aa16.62■□□□□ 0.25
SMDT1-201ENST00000331479 TMEM223A0PJW6 202 aa16.61■□□□□ 0.25
SMDT1-201ENST00000331479 CKS1BP61024 79 aa16.61■□□□□ 0.25
SMDT1-201ENST00000331479 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.61■□□□□ 0.25
SMDT1-201ENST00000331479 DPM2O94777 84 aa16.6■□□□□ 0.25
SMDT1-201ENST00000331479 PLNP26678 52 aa16.6■□□□□ 0.25
SMDT1-201ENST00000331479 CHTF8P0CG12 524 aa16.6■□□□□ 0.25
SMDT1-201ENST00000331479 KRTDAPP60985 99 aa16.6■□□□□ 0.25
SMDT1-201ENST00000331479 SNRPEP62304 92 aaKnown RBP16.6■□□□□ 0.25
SMDT1-201ENST00000331479 RNF151Q2KHN1 245 aa16.6■□□□□ 0.25
SMDT1-201ENST00000331479 PET117Q6UWS5 81 aa16.59■□□□□ 0.25
SMDT1-201ENST00000331479 HIST1H2BLQ99880 126 aa16.59■□□□□ 0.25
SMDT1-201ENST00000331479 IGKCP01834 107 aa16.58■□□□□ 0.24
SMDT1-201ENST00000331479 S100A2P29034 98 aa16.57■□□□□ 0.24
SMDT1-201ENST00000331479 LINC01545Q5VT33 79 aa16.57■□□□□ 0.24
SMDT1-201ENST00000331479 A0A096LNI7 61 aa16.56■□□□□ 0.24
SMDT1-201ENST00000331479 C9orf116Q5BN46 136 aaPredicted RBP16.56■□□□□ 0.24
SMDT1-201ENST00000331479 IGKV2-24A0A0C4DH68 120 aa16.55■□□□□ 0.24
SMDT1-201ENST00000331479 TRBV30A0A0K0K1B3 111 aa16.55■□□□□ 0.24
SMDT1-201ENST00000331479 C5orf52A6NGY3 159 aa16.55■□□□□ 0.24
SMDT1-201ENST00000331479 CXCL5P42830 114 aa16.55■□□□□ 0.24
SMDT1-201ENST00000331479 LOC107984640A0A0U1RRK4 108 aa16.55■□□□□ 0.24
SMDT1-201ENST00000331479 CIRBPQ14011 172 aaKnown RBP16.54■□□□□ 0.24
SMDT1-201ENST00000331479 SCXQ7RTU7 201 aa16.54■□□□□ 0.24
SMDT1-201ENST00000331479 SPACA4Q8TDM5 124 aa16.53■□□□□ 0.24
SMDT1-201ENST00000331479 GAGE2BQ13066 116 aa16.52■□□□□ 0.24
SMDT1-201ENST00000331479 HERC2O95714 4834 aa16.51■□□□□ 0.23
SMDT1-201ENST00000331479 RPL18AQ02543 176 aaKnown RBP16.51■□□□□ 0.23
SMDT1-201ENST00000331479 CIRBP-AS1Q8TBR5 109 aa16.51■□□□□ 0.23
SMDT1-201ENST00000331479 FAT1Q14517 4588 aa16.51■□□□□ 0.23
SMDT1-201ENST00000331479 PTTG1IPP53801 180 aa16.51■□□□□ 0.23
SMDT1-201ENST00000331479 Q6ZRP5 223 aa16.51■□□□□ 0.23
SMDT1-201ENST00000331479 PKIGQ9Y2B9 76 aa16.51■□□□□ 0.23
SMDT1-201ENST00000331479 TLX1NBP0CAT3 122 aa16.5■□□□□ 0.23
SMDT1-201ENST00000331479 MAJINQ3KP22 176 aa16.49■□□□□ 0.23
SMDT1-201ENST00000331479 DPH3Q96FX2 82 aa16.48■□□□□ 0.23
SMDT1-201ENST00000331479 KRTAP17-1Q9BYP8 105 aa16.47■□□□□ 0.23
SMDT1-201ENST00000331479 NDUFC2-KCTD14E9PQ53 114 aa16.47■□□□□ 0.23
SMDT1-201ENST00000331479 A0A087WYN8 130 aa16.46■□□□□ 0.23
SMDT1-201ENST00000331479 ZNF625Q96I27 306 aaPredicted RBP16.46■□□□□ 0.23
SMDT1-201ENST00000331479 TSPEAR-AS2P59090 65 aa16.45■□□□□ 0.22
SMDT1-201ENST00000331479 GAGE2EQ4V326 116 aa16.45■□□□□ 0.22
SMDT1-201ENST00000331479 LINC00474Q9P2X8 69 aa16.45■□□□□ 0.22
SMDT1-201ENST00000331479 GAGE2DQ9UEU5 116 aa16.45■□□□□ 0.22
SMDT1-201ENST00000331479 SMR3BP02814 79 aaPredicted RBP16.44■□□□□ 0.22
SMDT1-201ENST00000331479 HERVK_113P61574 105 aa16.44■□□□□ 0.22
SMDT1-201ENST00000331479 C20orf202A1L168 122 aa16.43■□□□□ 0.22
SMDT1-201ENST00000331479 LEPROTO15243 131 aa16.43■□□□□ 0.22
SMDT1-201ENST00000331479 STPG4Q8N801 248 aa16.43■□□□□ 0.22
SMDT1-201ENST00000331479 TMA7Q9Y2S6 64 aaKnown RBP16.43■□□□□ 0.22
SMDT1-201ENST00000331479 PLEKHB2Q96CS7 222 aa16.41■□□□□ 0.22
SMDT1-201ENST00000331479 PLAC8Q9NZF1 115 aa16.41■□□□□ 0.22
SMDT1-201ENST00000331479 ATOH7Q8N100 152 aa16.4■□□□□ 0.22
SMDT1-201ENST00000331479 E9PLD3 99 aa16.39■□□□□ 0.21
SMDT1-201ENST00000331479 J3QQQ9 107 aa16.39■□□□□ 0.21
SMDT1-201ENST00000331479 SFTA2Q6UW10 78 aa16.39■□□□□ 0.21
SMDT1-201ENST00000331479 NDUFA12Q9UI09 145 aa16.39■□□□□ 0.21
SMDT1-201ENST00000331479 A0A1W2PNN7 141 aa16.38■□□□□ 0.21
SMDT1-201ENST00000331479 PFN2P35080 140 aa16.38■□□□□ 0.21
SMDT1-201ENST00000331479 C9orf129Q5T035 196 aaKnown RBP16.38■□□□□ 0.21
SMDT1-201ENST00000331479 ERG28Q9UKR5 140 aa16.38■□□□□ 0.21
SMDT1-201ENST00000331479 XAGE1AQ9HD64 81 aa16.36■□□□□ 0.21
SMDT1-201ENST00000331479 FAM168BA1KXE4 195 aa16.35■□□□□ 0.21
SMDT1-201ENST00000331479 LGALS3P17931 250 aaKnown RBP16.34■□□□□ 0.21
SMDT1-201ENST00000331479 MYMXA0A1B0GTQ4 84 aa16.34■□□□□ 0.21
SMDT1-201ENST00000331479 Q8N1X5 172 aa16.34■□□□□ 0.21
SMDT1-201ENST00000331479 IGKV2D-26A0A0A0MRZ7 120 aa16.33■□□□□ 0.2
SMDT1-201ENST00000331479 EPM2AB3EWF7 344 aa16.32■□□□□ 0.2
SMDT1-201ENST00000331479 HERV-K104P63124 156 aa16.32■□□□□ 0.2
SMDT1-201ENST00000331479 COX17Q14061 63 aa16.32■□□□□ 0.2
SMDT1-201ENST00000331479 KRTAP7-1Q8IUC3 87 aa16.31■□□□□ 0.2
SMDT1-201ENST00000331479 AKR1D1P51857 326 aa16.3■□□□□ 0.2
SMDT1-201ENST00000331479 ANKRD39Q53RE8 183 aa16.3■□□□□ 0.2
SMDT1-201ENST00000331479 LINC00528Q8N1L1 170 aa16.3■□□□□ 0.2
SMDT1-201ENST00000331479 VPS13BQ7Z7G8 4022 aa16.3■□□□□ 0.2
SMDT1-201ENST00000331479 A0A0U1RRA0 63 aa16.3■□□□□ 0.2
SMDT1-201ENST00000331479 NMUP48645 174 aa16.3■□□□□ 0.2
SMDT1-201ENST00000331479 SMIM13P0DJ93 91 aa16.29■□□□□ 0.2
SMDT1-201ENST00000331479 SCGB1D1O95968 90 aa16.28■□□□□ 0.2
SMDT1-201ENST00000331479 LINC00158P58513 81 aa16.28■□□□□ 0.2
SMDT1-201ENST00000331479 MEIG1Q5JSS6 88 aa16.28■□□□□ 0.2
SMDT1-201ENST00000331479 FAM19A5Q7Z5A7 132 aaPredicted RBP16.28■□□□□ 0.2
SMDT1-201ENST00000331479 TTTY13Q9BZ97 58 aa16.27■□□□□ 0.2
SMDT1-201ENST00000331479 KRTAP4-5Q9BYR2 181 aa16.26■□□□□ 0.19
SMDT1-201ENST00000331479 SND1-IT1Q9HBX3 110 aa16.26■□□□□ 0.19
SMDT1-201ENST00000331479 SERTAD4-AS1Q5TG53 156 aa16.26■□□□□ 0.19
SMDT1-201ENST00000331479 Q5VSD8 79 aa16.26■□□□□ 0.19
SMDT1-201ENST00000331479 FAM229AH3BQW9 127 aa16.24■□□□□ 0.19
SMDT1-201ENST00000331479 PHF5AQ7RTV0 110 aaKnown RBP16.23■□□□□ 0.19
SMDT1-201ENST00000331479 A0A0J9YXY3 114 aa16.21■□□□□ 0.19
SMDT1-201ENST00000331479 LINC00587B1AMM8 73 aa16.21■□□□□ 0.19
SMDT1-201ENST00000331479 MIR7-3HGQ8N6C7 128 aa16.21■□□□□ 0.19
SMDT1-201ENST00000331479 ZNF815PA8K554 130 aa16.2■□□□□ 0.18
SMDT1-201ENST00000331479 M0QXV9 152 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms