RNA–Protein interactions for RNA: ENST00000328270.3

TNRC18-201, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 5

Gene TNRC18, Length 1,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-201ENST00000328270 TRBV30A0A0K0K1B3 111 aa13.55□□□□□ -0.24
TNRC18-201ENST00000328270 TLX1NBP0CAT3 122 aa13.55□□□□□ -0.24
TNRC18-201ENST00000328270 PMCHL1Q16048 86 aa13.55□□□□□ -0.24
TNRC18-201ENST00000328270 Q8IZM0 81 aa13.55□□□□□ -0.24
TNRC18-201ENST00000328270 A0A1W2PNN7 141 aa13.54□□□□□ -0.24
TNRC18-201ENST00000328270 IGLV5-45A0A087WSX0 123 aa13.53□□□□□ -0.24
TNRC18-201ENST00000328270 C9orf116Q5BN46 136 aaPredicted RBP13.53□□□□□ -0.24
TNRC18-201ENST00000328270 C6orf226Q5I0X4 101 aa13.53□□□□□ -0.24
TNRC18-201ENST00000328270 Q6ZRP5 223 aa13.53□□□□□ -0.24
TNRC18-201ENST00000328270 KRTAP29-1A8MX34 341 aaPredicted RBP13.52□□□□□ -0.25
TNRC18-201ENST00000328270 CKS1BP61024 79 aa13.52□□□□□ -0.25
TNRC18-201ENST00000328270 SMIM1B2RUZ4 78 aa13.51□□□□□ -0.25
TNRC18-201ENST00000328270 J3QL48 77 aa13.51□□□□□ -0.25
TNRC18-201ENST00000328270 PDZD11Q5EBL8 140 aa13.51□□□□□ -0.25
TNRC18-201ENST00000328270 NDUFA6P56556 154 aa13.5□□□□□ -0.25
TNRC18-201ENST00000328270 PRR3P79522 188 aaKnown RBP13.5□□□□□ -0.25
TNRC18-201ENST00000328270 GAGE2EQ4V326 116 aa13.5□□□□□ -0.25
TNRC18-201ENST00000328270 GAGE2DQ9UEU5 116 aa13.5□□□□□ -0.25
TNRC18-201ENST00000328270 NDUFC2-KCTD14E9PQ53 114 aa13.48□□□□□ -0.25
TNRC18-201ENST00000328270 ATP5LO75964 103 aa13.48□□□□□ -0.25
TNRC18-201ENST00000328270 SPINK8P0C7L1 97 aa13.47□□□□□ -0.25
TNRC18-201ENST00000328270 IGLC3P0DOY3 106 aa13.47□□□□□ -0.25
TNRC18-201ENST00000328270 CHCHD1Q96BP2 118 aaKnown RBP13.47□□□□□ -0.25
TNRC18-201ENST00000328270 FAM168BA1KXE4 195 aa13.46□□□□□ -0.25
TNRC18-201ENST00000328270 F8VRH5 84 aa13.46□□□□□ -0.25
TNRC18-201ENST00000328270 TRGC2P03986 189 aa13.46□□□□□ -0.25
TNRC18-201ENST00000328270 OXTP01178 125 aa13.45□□□□□ -0.26
TNRC18-201ENST00000328270 CXCL5P42830 114 aa13.45□□□□□ -0.26
TNRC18-201ENST00000328270 COX7B2Q8TF08 81 aa13.45□□□□□ -0.26
TNRC18-201ENST00000328270 H3BRM9 83 aa13.44□□□□□ -0.26
TNRC18-201ENST00000328270 PHF5AQ7RTV0 110 aaKnown RBP13.44□□□□□ -0.26
TNRC18-201ENST00000328270 FAM19A5Q7Z5A7 132 aaPredicted RBP13.43□□□□□ -0.26
TNRC18-201ENST00000328270 BAGE3Q86Y29 109 aa13.43□□□□□ -0.26
TNRC18-201ENST00000328270 ZNF22P17026 224 aaPredicted RBP13.42□□□□□ -0.26
TNRC18-201ENST00000328270 C9orf129Q5T035 196 aaKnown RBP13.41□□□□□ -0.26
TNRC18-201ENST00000328270 COLCA2A8K830 154 aa13.4□□□□□ -0.26
TNRC18-201ENST00000328270 HSBP1O75506 76 aa13.4□□□□□ -0.26
TNRC18-201ENST00000328270 KRTAP7-1Q8IUC3 87 aa13.4□□□□□ -0.26
TNRC18-201ENST00000328270 IFI27L1Q96BM0 104 aa13.39□□□□□ -0.27
TNRC18-201ENST00000328270 IGLV5-39A0A0G2JS06 123 aa13.38□□□□□ -0.27
TNRC18-201ENST00000328270 C11orf86A6NJI1 115 aa13.38□□□□□ -0.27
TNRC18-201ENST00000328270 FAM19A2Q8N3H0 131 aa13.38□□□□□ -0.27
TNRC18-201ENST00000328270 PSORS1C2Q9UIG4 136 aa13.38□□□□□ -0.27
TNRC18-201ENST00000328270 M0QXV9 152 aa13.37□□□□□ -0.27
TNRC18-201ENST00000328270 XAGE1AQ9HD64 81 aa13.37□□□□□ -0.27
TNRC18-201ENST00000328270 CHTOPQ9Y3Y2 248 aaKnown RBP13.37□□□□□ -0.27
TNRC18-201ENST00000328270 LINC00310P59036 64 aa13.35□□□□□ -0.27
TNRC18-201ENST00000328270 TMEM170BQ5T4T1 132 aa13.35□□□□□ -0.27
TNRC18-201ENST00000328270 TRAV12-1A0A0B4J245 112 aa13.34□□□□□ -0.27
TNRC18-201ENST00000328270 SERF1AO75920 110 aa13.34□□□□□ -0.27
TNRC18-201ENST00000328270 SCO1O75880 301 aa13.33□□□□□ -0.28
TNRC18-201ENST00000328270 SPINK6Q6UWN8 80 aa13.33□□□□□ -0.28
TNRC18-201ENST00000328270 KRTAP11-1Q8IUC1 163 aa13.33□□□□□ -0.28
TNRC18-201ENST00000328270 C1orf137Q5JT78 98 aa13.32□□□□□ -0.28
TNRC18-201ENST00000328270 SERTAD4-AS1Q5TG53 156 aa13.32□□□□□ -0.28
TNRC18-201ENST00000328270 SRSF9Q13242 221 aaKnown RBP eCLIP13.31□□□□□ -0.28
TNRC18-201ENST00000328270 UBE2BP63146 152 aa13.3□□□□□ -0.28
TNRC18-201ENST00000328270 NUPR1O60356 82 aa13.28□□□□□ -0.28
TNRC18-201ENST00000328270 LEPROTL1O95214 131 aa13.28□□□□□ -0.28
TNRC18-201ENST00000328270 MT1HL1P0DM35 61 aa13.28□□□□□ -0.28
TNRC18-201ENST00000328270 TNXBP22105 4242 aa13.27□□□□□ -0.28
TNRC18-201ENST00000328270 C22orf24Q9Y442 160 aa13.27□□□□□ -0.29
TNRC18-201ENST00000328270 TMEM223A0PJW6 202 aa13.26□□□□□ -0.29
TNRC18-201ENST00000328270 H0Y8G0 127 aa13.26□□□□□ -0.29
TNRC18-201ENST00000328270 IGLV7-43P04211 117 aa13.25□□□□□ -0.29
TNRC18-201ENST00000328270 PFN2P35080 140 aa13.25□□□□□ -0.29
TNRC18-201ENST00000328270 ODF1Q14990 250 aa13.25□□□□□ -0.29
TNRC18-201ENST00000328270 REG3GQ6UW15 175 aa13.25□□□□□ -0.29
TNRC18-201ENST00000328270 SFTA2Q6UW10 78 aa13.24□□□□□ -0.29
TNRC18-201ENST00000328270 HSPB8Q9UJY1 196 aa13.24□□□□□ -0.29
TNRC18-201ENST00000328270 ERG28Q9UKR5 140 aa13.24□□□□□ -0.29
TNRC18-201ENST00000328270 FABP4P15090 132 aa13.23□□□□□ -0.29
TNRC18-201ENST00000328270 LBHQ53QV2 105 aaPredicted RBP13.23□□□□□ -0.29
TNRC18-201ENST00000328270 ZNF625Q96I27 306 aaPredicted RBP13.23□□□□□ -0.29
TNRC18-201ENST00000328270 LINC01600Q96MT4 127 aa13.23□□□□□ -0.29
TNRC18-201ENST00000328270 TP73-AS1Q9UF72 201 aa13.23□□□□□ -0.29
TNRC18-201ENST00000328270 PLA2G2DQ9UNK4 145 aa13.22□□□□□ -0.29
TNRC18-201ENST00000328270 MRPL55Q7Z7F7 128 aaKnown RBP13.21□□□□□ -0.29
TNRC18-201ENST00000328270 HIST1H2BKO60814 126 aa13.2□□□□□ -0.3
TNRC18-201ENST00000328270 HIST1H2BJP06899 126 aa13.2□□□□□ -0.3
TNRC18-201ENST00000328270 HIST1H2BOP23527 126 aa13.2□□□□□ -0.3
TNRC18-201ENST00000328270 HIST1H2BBP33778 126 aa13.2□□□□□ -0.3
TNRC18-201ENST00000328270 HIST1H2BDP58876 126 aa13.2□□□□□ -0.3
TNRC18-201ENST00000328270 HIST1H2BCP62807 126 aa13.2□□□□□ -0.3
TNRC18-201ENST00000328270 COX17Q14061 63 aa13.2□□□□□ -0.3
TNRC18-201ENST00000328270 HIST2H2BEQ16778 126 aa13.2□□□□□ -0.3
TNRC18-201ENST00000328270 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.2□□□□□ -0.3
TNRC18-201ENST00000328270 HIST1H2BHQ93079 126 aa13.2□□□□□ -0.3
TNRC18-201ENST00000328270 HIST1H2BNQ99877 126 aa13.2□□□□□ -0.3
TNRC18-201ENST00000328270 HIST1H2BMQ99879 126 aa13.2□□□□□ -0.3
TNRC18-201ENST00000328270 SND1-IT1Q9HBX3 110 aa13.19□□□□□ -0.3
TNRC18-201ENST00000328270 IGLV5-37A0A075B6J1 123 aa13.18□□□□□ -0.3
TNRC18-201ENST00000328270 DIRC1Q969H9 104 aa13.17□□□□□ -0.3
TNRC18-201ENST00000328270 PLNP26678 52 aa13.16□□□□□ -0.3
TNRC18-201ENST00000328270 NKAPP1Q8N9T2 125 aa13.16□□□□□ -0.3
TNRC18-201ENST00000328270 LINC00167Q96N53 147 aa13.16□□□□□ -0.3
TNRC18-201ENST00000328270 GAGE10A6NGK3 116 aa13.14□□□□□ -0.31
TNRC18-201ENST00000328270 RPL37AP8A6NKH3 93 aa13.14□□□□□ -0.31
TNRC18-201ENST00000328270 H0Y9J4 135 aa13.14□□□□□ -0.31
TNRC18-201ENST00000328270 DPM2O94777 84 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms