RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 FAM222AQ5U5X8 452 aa9.04□□□□□ -0.96
HMGCS1-201ENST00000325110 IL17DQ8TAD2 202 aa9.04□□□□□ -0.96
HMGCS1-201ENST00000325110 SMIM20Q8N5G0 67 aa9.04□□□□□ -0.96
HMGCS1-201ENST00000325110 IGHV3OR16-9A0A0B4J2B5 98 aa9.03□□□□□ -0.96
HMGCS1-201ENST00000325110 IGKV2-28A0A075B6P5 120 aa9.03□□□□□ -0.96
HMGCS1-201ENST00000325110 IGKV2D-28P01615 120 aa9.03□□□□□ -0.96
HMGCS1-201ENST00000325110 SDIM1Q6ZPB5 146 aa9.02□□□□□ -0.96
HMGCS1-201ENST00000325110 Q8N3U1 123 aa9.02□□□□□ -0.96
HMGCS1-201ENST00000325110 C9orf116Q5BN46 136 aaPredicted RBP9.02□□□□□ -0.97
HMGCS1-201ENST00000325110 ACYP1P07311 99 aa9.02□□□□□ -0.97
HMGCS1-201ENST00000325110 ZNF469Q96JG9 3925 aaPredicted RBP9.02□□□□□ -0.97
HMGCS1-201ENST00000325110 FAM240AA0A1B0GVK7 77 aa9.01□□□□□ -0.97
HMGCS1-201ENST00000325110 IBA57-AS1B1ANH7 110 aa9.01□□□□□ -0.97
HMGCS1-201ENST00000325110 S100A7L2Q5SY68 101 aa9.01□□□□□ -0.97
HMGCS1-201ENST00000325110 HIST1H4AP62805 103 aaKnown RBP9.01□□□□□ -0.97
HMGCS1-201ENST00000325110 C9orf153Q5TBE3 101 aa9.01□□□□□ -0.97
HMGCS1-201ENST00000325110 SMCR5Q8TEV8 140 aa9.01□□□□□ -0.97
HMGCS1-201ENST00000325110 A0A087WZ39 114 aa9.01□□□□□ -0.97
HMGCS1-201ENST00000325110 RPL28P46779 137 aaKnown RBP9.01□□□□□ -0.97
HMGCS1-201ENST00000325110 DAD1P61803 113 aa9.01□□□□□ -0.97
HMGCS1-201ENST00000325110 LINC00643Q86TS7 51 aa9.01□□□□□ -0.97
HMGCS1-201ENST00000325110 PRO0255Q9UI72 69 aa9□□□□□ -0.97
HMGCS1-201ENST00000325110 Q6Q795 121 aa9□□□□□ -0.97
HMGCS1-201ENST00000325110 H0YGX0 51 aa8.99□□□□□ -0.97
HMGCS1-201ENST00000325110 OVOL2Q9BRP0 275 aa8.99□□□□□ -0.97
HMGCS1-201ENST00000325110 C19orf73Q9NVV2 129 aa8.99□□□□□ -0.97
HMGCS1-201ENST00000325110 C9orf129Q5T035 196 aaKnown RBP8.98□□□□□ -0.97
HMGCS1-201ENST00000325110 MRPL23Q16540 153 aaKnown RBP8.98□□□□□ -0.97
HMGCS1-201ENST00000325110 CSNK1G2-AS1Q8NCQ2 148 aa8.98□□□□□ -0.97
HMGCS1-201ENST00000325110 TEP1Q99973 2627 aaKnown RBP8.98□□□□□ -0.97
HMGCS1-201ENST00000325110 NBPF19A0A087WUL8 3843 aa8.98□□□□□ -0.97
HMGCS1-201ENST00000325110 VWFP04275 2813 aa8.98□□□□□ -0.97
HMGCS1-201ENST00000325110 ORMDL1Q9P0S3 153 aa8.98□□□□□ -0.97
HMGCS1-201ENST00000325110 CHCHD10Q8WYQ3 142 aaPredicted RBP8.97□□□□□ -0.97
HMGCS1-201ENST00000325110 FLNBO75369 2602 aaKnown RBP8.96□□□□□ -0.98
HMGCS1-201ENST00000325110 TENM4Q6N022 2769 aa8.95□□□□□ -0.98
HMGCS1-201ENST00000325110 A0A087WVE0 104 aa8.95□□□□□ -0.98
HMGCS1-201ENST00000325110 REG3AQ06141 175 aa8.95□□□□□ -0.98
HMGCS1-201ENST00000325110 KLK12Q9UKR0 248 aa8.95□□□□□ -0.98
HMGCS1-201ENST00000325110 FAM19A3Q7Z5A8 133 aa8.95□□□□□ -0.98
HMGCS1-201ENST00000325110 HILS1P60008 231 aa8.94□□□□□ -0.98
HMGCS1-201ENST00000325110 DEFB121Q5J5C9 76 aa8.94□□□□□ -0.98
HMGCS1-201ENST00000325110 LAMTOR3Q9UHA4 124 aa8.94□□□□□ -0.98
HMGCS1-201ENST00000325110 C6orf99Q4VX62 202 aa8.93□□□□□ -0.98
HMGCS1-201ENST00000325110 TRBV7-7A0A0K0K1E9 115 aa8.93□□□□□ -0.98
HMGCS1-201ENST00000325110 CXCL5P42830 114 aa8.93□□□□□ -0.98
HMGCS1-201ENST00000325110 SPATA3Q8NHX4 192 aa8.93□□□□□ -0.98
HMGCS1-201ENST00000325110 C6orf223Q8N319 242 aa8.92□□□□□ -0.98
HMGCS1-201ENST00000325110 LINC00846Q9NV44 126 aa8.92□□□□□ -0.98
HMGCS1-201ENST00000325110 RPL18AQ02543 176 aaKnown RBP8.92□□□□□ -0.98
HMGCS1-201ENST00000325110 SPAG11BQ08648 103 aa8.92□□□□□ -0.98
HMGCS1-201ENST00000325110 WFDC9Q8NEX5 89 aa8.92□□□□□ -0.98
HMGCS1-201ENST00000325110 IGHV4-28A0A0C4DH34 117 aa8.92□□□□□ -0.98
HMGCS1-201ENST00000325110 A0A1B0GX51 115 aa8.91□□□□□ -0.98
HMGCS1-201ENST00000325110 LINC01600Q96MT4 127 aa8.91□□□□□ -0.98
HMGCS1-201ENST00000325110 XAGE1AQ9HD64 81 aa8.91□□□□□ -0.98
HMGCS1-201ENST00000325110 Q8IZM0 81 aa8.91□□□□□ -0.98
HMGCS1-201ENST00000325110 KIR2DL5BQ8NHK3 375 aa8.91□□□□□ -0.98
HMGCS1-201ENST00000325110 X6R8D5 127 aa8.91□□□□□ -0.98
HMGCS1-201ENST00000325110 UNQ6190/PRO20217Q6UXQ8 127 aa8.91□□□□□ -0.98
HMGCS1-201ENST00000325110 KLK5Q9Y337 293 aaPredicted RBP8.91□□□□□ -0.98
HMGCS1-201ENST00000325110 KRTAP1-1Q07627 177 aa8.9□□□□□ -0.98
HMGCS1-201ENST00000325110 TMEM126AQ9H061 195 aa8.9□□□□□ -0.98
HMGCS1-201ENST00000325110 C16orf95Q9H693 158 aa8.9□□□□□ -0.98
HMGCS1-201ENST00000325110 INAFM1C9JVW0 142 aa8.89□□□□□ -0.99
HMGCS1-201ENST00000325110 CD164L2Q6UWJ8 174 aa8.89□□□□□ -0.99
HMGCS1-201ENST00000325110 J3QKU1 62 aa8.89□□□□□ -0.99
HMGCS1-201ENST00000325110 KRTAP10-3P60369 221 aa8.89□□□□□ -0.99
HMGCS1-201ENST00000325110 FAM110AQ9BQ89 295 aa8.89□□□□□ -0.99
HMGCS1-201ENST00000325110 CELA1Q9UNI1 258 aa8.89□□□□□ -0.99
HMGCS1-201ENST00000325110 C22orf24Q9Y442 160 aa8.89□□□□□ -0.99
HMGCS1-201ENST00000325110 IMUPQ9GZP8 106 aa8.88□□□□□ -0.99
HMGCS1-201ENST00000325110 APOC4P55056 127 aa8.88□□□□□ -0.99
HMGCS1-201ENST00000325110 AKAP9Q99996 3911 aa8.88□□□□□ -0.99
HMGCS1-201ENST00000325110 HIGD2BQ4VC39 106 aa8.87□□□□□ -0.99
HMGCS1-201ENST00000325110 C9orf66Q5T8R8 295 aa8.87□□□□□ -0.99
HMGCS1-201ENST00000325110 F8P00451 2351 aa8.87□□□□□ -0.99
HMGCS1-201ENST00000325110 TENM1Q9UKZ4 2725 aa8.87□□□□□ -0.99
HMGCS1-201ENST00000325110 C10orf25Q5T742 122 aa8.87□□□□□ -0.99
HMGCS1-201ENST00000325110 hADV29S1A0JD25 119 aa8.87□□□□□ -0.99
HMGCS1-201ENST00000325110 A0A1B0GUV1 79 aa8.86□□□□□ -0.99
HMGCS1-201ENST00000325110 LY6G6DO95868 133 aa8.86□□□□□ -0.99
HMGCS1-201ENST00000325110 C3orf22Q8N5N4 141 aa8.86□□□□□ -0.99
HMGCS1-201ENST00000325110 HAMPP81172 84 aa8.86□□□□□ -0.99
HMGCS1-201ENST00000325110 LYRM9A8MSI8 78 aa8.85□□□□□ -0.99
HMGCS1-201ENST00000325110 TRAV23DV6A0A075B6W5 121 aa8.85□□□□□ -0.99
HMGCS1-201ENST00000325110 SPART-AS1P0CW21 52 aa8.85□□□□□ -0.99
HMGCS1-201ENST00000325110 Q8N814 137 aa8.85□□□□□ -0.99
HMGCS1-201ENST00000325110 CYSRT1A8MQ03 144 aa8.84□□□□□ -0.99
HMGCS1-201ENST00000325110 UQCRQO14949 82 aa8.84□□□□□ -0.99
HMGCS1-201ENST00000325110 HIVEP1P15822 2718 aa8.84□□□□□ -0.99
HMGCS1-201ENST00000325110 NOTCH1P46531 2555 aa8.84□□□□□ -0.99
HMGCS1-201ENST00000325110 SMIM9A6NGZ8 99 aa8.84□□□□□ -0.99
HMGCS1-201ENST00000325110 ATOX1O00244 68 aa8.84□□□□□ -0.99
HMGCS1-201ENST00000325110 UBL5Q9BZL1 73 aa8.84□□□□□ -0.99
HMGCS1-201ENST00000325110 TMEM256-PLSCR3K7ERE1 68 aa8.83□□□□□ -1
HMGCS1-201ENST00000325110 ZNF561-AS1K7EIQ3 104 aa8.83□□□□□ -1
HMGCS1-201ENST00000325110 MAST4O15021 2626 aa8.83□□□□□ -1
HMGCS1-201ENST00000325110 ENHOQ6UWT2 76 aa8.83□□□□□ -1
HMGCS1-201ENST00000325110 JMJD7-PLA2G4BH0Y9G9 81 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms