RNA–Protein interactions for RNA: ENST00000303927.3

CAVIN3-201, Transcript of caveolae associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAVIN3, Length 1,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-201ENST00000303927 UNQ6190/PRO20217Q6UXQ8 127 aa12.66□□□□□ -0.38
CAVIN3-201ENST00000303927 Q8IZM0 81 aa12.66□□□□□ -0.38
CAVIN3-201ENST00000303927 IGLV5-45A0A087WSX0 123 aa12.65□□□□□ -0.38
CAVIN3-201ENST00000303927 TRBV30A0A0K0K1B3 111 aa12.65□□□□□ -0.38
CAVIN3-201ENST00000303927 RPL18AQ02543 176 aaKnown RBP12.65□□□□□ -0.38
CAVIN3-201ENST00000303927 TOMM7Q9P0U1 55 aa12.65□□□□□ -0.38
CAVIN3-201ENST00000303927 COLCA2A8K830 154 aa12.64□□□□□ -0.39
CAVIN3-201ENST00000303927 RPL37AP61513 92 aaKnown RBP12.64□□□□□ -0.39
CAVIN3-201ENST00000303927 C6orf226Q5I0X4 101 aa12.64□□□□□ -0.39
CAVIN3-201ENST00000303927 C10orf25Q5T742 122 aa12.64□□□□□ -0.39
CAVIN3-201ENST00000303927 BAGE3Q86Y29 109 aa12.64□□□□□ -0.39
CAVIN3-201ENST00000303927 C6orf48Q9UBA6 75 aa12.64□□□□□ -0.39
CAVIN3-201ENST00000303927 TLX1NBP0CAT3 122 aa12.63□□□□□ -0.39
CAVIN3-201ENST00000303927 NDUFA6P56556 154 aa12.63□□□□□ -0.39
CAVIN3-201ENST00000303927 CKS1BP61024 79 aa12.63□□□□□ -0.39
CAVIN3-201ENST00000303927 C7orf33Q8WU49 177 aa12.62□□□□□ -0.39
CAVIN3-201ENST00000303927 SMIM1B2RUZ4 78 aa12.61□□□□□ -0.39
CAVIN3-201ENST00000303927 H3BRM9 83 aa12.61□□□□□ -0.39
CAVIN3-201ENST00000303927 HSBP1O75506 76 aa12.61□□□□□ -0.39
CAVIN3-201ENST00000303927 IGLC3P0DOY3 106 aa12.61□□□□□ -0.39
CAVIN3-201ENST00000303927 C2orf82Q6UX34 121 aa12.61□□□□□ -0.39
CAVIN3-201ENST00000303927 CXCL5P42830 114 aa12.6□□□□□ -0.39
CAVIN3-201ENST00000303927 UBR4Q5T4S7 5183 aa12.58□□□□□ -0.4
CAVIN3-201ENST00000303927 HNRNPA3P51991 378 aaKnown RBP12.58□□□□□ -0.4
CAVIN3-201ENST00000303927 Q6ZRP5 223 aa12.57□□□□□ -0.4
CAVIN3-201ENST00000303927 COX7B2Q8TF08 81 aa12.57□□□□□ -0.4
CAVIN3-201ENST00000303927 IFI27L1Q96BM0 104 aa12.57□□□□□ -0.4
CAVIN3-201ENST00000303927 NDUFC2-KCTD14E9PQ53 114 aa12.56□□□□□ -0.4
CAVIN3-201ENST00000303927 F8VRH5 84 aa12.56□□□□□ -0.4
CAVIN3-201ENST00000303927 SPINK8P0C7L1 97 aa12.56□□□□□ -0.4
CAVIN3-201ENST00000303927 TRAV12-1A0A0B4J245 112 aa12.55□□□□□ -0.4
CAVIN3-201ENST00000303927 SCO1O75880 301 aa12.55□□□□□ -0.4
CAVIN3-201ENST00000303927 C9orf116Q5BN46 136 aaPredicted RBP12.55□□□□□ -0.4
CAVIN3-201ENST00000303927 FAM19A2Q8N3H0 131 aa12.55□□□□□ -0.4
CAVIN3-201ENST00000303927 SERF1AO75920 110 aa12.54□□□□□ -0.4
CAVIN3-201ENST00000303927 ZNF22P17026 224 aaPredicted RBP12.54□□□□□ -0.4
CAVIN3-201ENST00000303927 PLA2G2DQ9UNK4 145 aa12.54□□□□□ -0.4
CAVIN3-201ENST00000303927 CHTOPQ9Y3Y2 248 aaKnown RBP12.54□□□□□ -0.4
CAVIN3-201ENST00000303927 A0A1W2PNN7 141 aa12.53□□□□□ -0.4
CAVIN3-201ENST00000303927 GAGE2EQ4V326 116 aa12.53□□□□□ -0.4
CAVIN3-201ENST00000303927 GAGE2DQ9UEU5 116 aa12.53□□□□□ -0.4
CAVIN3-201ENST00000303927 IGLV5-39A0A0G2JS06 123 aa12.51□□□□□ -0.41
CAVIN3-201ENST00000303927 C11orf86A6NJI1 115 aa12.51□□□□□ -0.41
CAVIN3-201ENST00000303927 LEPROTL1O95214 131 aa12.51□□□□□ -0.41
CAVIN3-201ENST00000303927 LINC00310P59036 64 aa12.51□□□□□ -0.41
CAVIN3-201ENST00000303927 TMEM170BQ5T4T1 132 aa12.5□□□□□ -0.41
CAVIN3-201ENST00000303927 PRR3P79522 188 aaKnown RBP12.48□□□□□ -0.41
CAVIN3-201ENST00000303927 HSPB8Q9UJY1 196 aa12.47□□□□□ -0.41
CAVIN3-201ENST00000303927 FAM168BA1KXE4 195 aa12.45□□□□□ -0.42
CAVIN3-201ENST00000303927 NUPR1O60356 82 aa12.45□□□□□ -0.42
CAVIN3-201ENST00000303927 HIST1H2BKO60814 126 aa12.45□□□□□ -0.42
CAVIN3-201ENST00000303927 HIST1H2BJP06899 126 aa12.45□□□□□ -0.42
CAVIN3-201ENST00000303927 HIST1H2BOP23527 126 aa12.45□□□□□ -0.42
CAVIN3-201ENST00000303927 HIST1H2BBP33778 126 aa12.45□□□□□ -0.42
CAVIN3-201ENST00000303927 HIST1H2BDP58876 126 aa12.45□□□□□ -0.42
CAVIN3-201ENST00000303927 HIST1H2BCP62807 126 aa12.45□□□□□ -0.42
CAVIN3-201ENST00000303927 HIST2H2BEQ16778 126 aa12.45□□□□□ -0.42
CAVIN3-201ENST00000303927 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.45□□□□□ -0.42
CAVIN3-201ENST00000303927 C9orf129Q5T035 196 aaKnown RBP12.45□□□□□ -0.42
CAVIN3-201ENST00000303927 FAM19A5Q7Z5A7 132 aaPredicted RBP12.45□□□□□ -0.42
CAVIN3-201ENST00000303927 HIST1H2BHQ93079 126 aa12.45□□□□□ -0.42
CAVIN3-201ENST00000303927 HIST1H2BNQ99877 126 aa12.45□□□□□ -0.42
CAVIN3-201ENST00000303927 HIST1H2BMQ99879 126 aa12.45□□□□□ -0.42
CAVIN3-201ENST00000303927 MT1HL1P0DM35 61 aa12.44□□□□□ -0.42
CAVIN3-201ENST00000303927 SFTA2Q6UW10 78 aa12.44□□□□□ -0.42
CAVIN3-201ENST00000303927 PHF5AQ7RTV0 110 aaKnown RBP12.44□□□□□ -0.42
CAVIN3-201ENST00000303927 H0Y8G0 127 aa12.43□□□□□ -0.42
CAVIN3-201ENST00000303927 ODF1Q14990 250 aa12.43□□□□□ -0.42
CAVIN3-201ENST00000303927 TMEM223A0PJW6 202 aa12.42□□□□□ -0.42
CAVIN3-201ENST00000303927 FABP4P15090 132 aa12.42□□□□□ -0.42
CAVIN3-201ENST00000303927 M0QXV9 152 aa12.41□□□□□ -0.42
CAVIN3-201ENST00000303927 S100A1P23297 94 aa12.41□□□□□ -0.42
CAVIN3-201ENST00000303927 XAGE1AQ9HD64 81 aa12.41□□□□□ -0.42
CAVIN3-201ENST00000303927 KRTAP7-1Q8IUC3 87 aa12.39□□□□□ -0.43
CAVIN3-201ENST00000303927 MAP1LC3CQ9BXW4 147 aa12.38□□□□□ -0.43
CAVIN3-201ENST00000303927 PSORS1C2Q9UIG4 136 aa12.38□□□□□ -0.43
CAVIN3-201ENST00000303927 PLNP26678 52 aa12.37□□□□□ -0.43
CAVIN3-201ENST00000303927 COX17Q14061 63 aa12.37□□□□□ -0.43
CAVIN3-201ENST00000303927 ERG28Q9UKR5 140 aa12.37□□□□□ -0.43
CAVIN3-201ENST00000303927 UBE2BP63146 152 aa12.36□□□□□ -0.43
CAVIN3-201ENST00000303927 ZNF625Q96I27 306 aaPredicted RBP12.36□□□□□ -0.43
CAVIN3-201ENST00000303927 TNXBP22105 4242 aa12.36□□□□□ -0.43
CAVIN3-201ENST00000303927 PFN2P35080 140 aa12.35□□□□□ -0.43
CAVIN3-201ENST00000303927 SPINK6Q6UWN8 80 aa12.35□□□□□ -0.43
CAVIN3-201ENST00000303927 DPM2O94777 84 aa12.34□□□□□ -0.43
CAVIN3-201ENST00000303927 LBHQ53QV2 105 aaPredicted RBP12.34□□□□□ -0.43
CAVIN3-201ENST00000303927 C1orf137Q5JT78 98 aa12.34□□□□□ -0.43
CAVIN3-201ENST00000303927 TP73-AS1Q9UF72 201 aa12.34□□□□□ -0.43
CAVIN3-201ENST00000303927 C22orf24Q9Y442 160 aa12.34□□□□□ -0.43
CAVIN3-201ENST00000303927 ATP6V1G1O75348 118 aa12.33□□□□□ -0.44
CAVIN3-201ENST00000303927 IGKCP01834 107 aa12.32□□□□□ -0.44
CAVIN3-201ENST00000303927 COA6Q5JTJ3 125 aaKnown RBP12.32□□□□□ -0.44
CAVIN3-201ENST00000303927 HERVK_113P61574 105 aa12.31□□□□□ -0.44
CAVIN3-201ENST00000303927 SRSF9Q13242 221 aaKnown RBP eCLIP12.31□□□□□ -0.44
CAVIN3-201ENST00000303927 HERV-K104P63124 156 aa12.3□□□□□ -0.44
CAVIN3-201ENST00000303927 MRPL55Q7Z7F7 128 aaKnown RBP12.3□□□□□ -0.44
CAVIN3-201ENST00000303927 KRTAP11-1Q8IUC1 163 aa12.3□□□□□ -0.44
CAVIN3-201ENST00000303927 PMCHL2Q9BQD1 86 aa12.3□□□□□ -0.44
CAVIN3-201ENST00000303927 PLEKHB2Q96CS7 222 aa12.29□□□□□ -0.44
CAVIN3-201ENST00000303927 IGLV5-37A0A075B6J1 123 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms