RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 TRIAP1O43715 76 aa12.61□□□□□ -0.39
CDC42EP3-201ENST00000295324 PTPRBP23467 1997 aa12.61□□□□□ -0.39
CDC42EP3-201ENST00000295324 ZNF73O43830 326 aaPredicted RBP12.61□□□□□ -0.39
CDC42EP3-201ENST00000295324 Q6ZQY7 126 aa12.61□□□□□ -0.39
CDC42EP3-201ENST00000295324 A0A1B0GUV1 79 aa12.6□□□□□ -0.39
CDC42EP3-201ENST00000295324 WFDC10BQ8IUB3 73 aa12.6□□□□□ -0.39
CDC42EP3-201ENST00000295324 PRR15LQ9BU68 103 aa12.6□□□□□ -0.39
CDC42EP3-201ENST00000295324 M0QXV9 152 aa12.6□□□□□ -0.39
CDC42EP3-201ENST00000295324 RPL28P46779 137 aaKnown RBP12.6□□□□□ -0.39
CDC42EP3-201ENST00000295324 LINC00694P0DN24 101 aa12.59□□□□□ -0.39
CDC42EP3-201ENST00000295324 CCKP06307 115 aa12.59□□□□□ -0.39
CDC42EP3-201ENST00000295324 ATP5EP56381 51 aaPredicted RBP12.59□□□□□ -0.39
CDC42EP3-201ENST00000295324 F8WDY8 70 aa12.58□□□□□ -0.4
CDC42EP3-201ENST00000295324 C6orf223Q8N319 242 aa12.58□□□□□ -0.4
CDC42EP3-201ENST00000295324 SMIM1B2RUZ4 78 aa12.58□□□□□ -0.4
CDC42EP3-201ENST00000295324 POM121L12Q8N7R1 296 aa12.58□□□□□ -0.4
CDC42EP3-201ENST00000295324 SPINK6Q6UWN8 80 aa12.57□□□□□ -0.4
CDC42EP3-201ENST00000295324 FSHBP01225 129 aa12.56□□□□□ -0.4
CDC42EP3-201ENST00000295324 NDUFC1O43677 76 aa12.55□□□□□ -0.4
CDC42EP3-201ENST00000295324 IGLV9-49A0A0B4J1Y8 123 aa12.55□□□□□ -0.4
CDC42EP3-201ENST00000295324 Q6ZSN1 163 aa12.55□□□□□ -0.4
CDC42EP3-201ENST00000295324 SERP2Q8N6R1 65 aa12.55□□□□□ -0.4
CDC42EP3-201ENST00000295324 SMIM11BQ8TCY0 68 aa12.54□□□□□ -0.4
CDC42EP3-201ENST00000295324 TET2Q6N021 2002 aaPredicted RBP12.54□□□□□ -0.4
CDC42EP3-201ENST00000295324 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.53□□□□□ -0.4
CDC42EP3-201ENST00000295324 C2orf48Q96LS8 159 aa12.53□□□□□ -0.4
CDC42EP3-201ENST00000295324 SNURFQ9Y675 71 aa12.53□□□□□ -0.4
CDC42EP3-201ENST00000295324 HRCT1Q6UXD1 115 aa12.52□□□□□ -0.4
CDC42EP3-201ENST00000295324 AMELXQ99217 191 aa12.52□□□□□ -0.41
CDC42EP3-201ENST00000295324 C3orf84H3BNL1 204 aa12.52□□□□□ -0.41
CDC42EP3-201ENST00000295324 A6NED7 52 aa12.51□□□□□ -0.41
CDC42EP3-201ENST00000295324 FAM19A3Q7Z5A8 133 aa12.51□□□□□ -0.41
CDC42EP3-201ENST00000295324 HECTD1Q9ULT8 2610 aa12.51□□□□□ -0.41
CDC42EP3-201ENST00000295324 C11orf72Q8NBR9 251 aa12.51□□□□□ -0.41
CDC42EP3-201ENST00000295324 CELA1Q9UNI1 258 aa12.51□□□□□ -0.41
CDC42EP3-201ENST00000295324 C9orf116Q5BN46 136 aaPredicted RBP12.51□□□□□ -0.41
CDC42EP3-201ENST00000295324 IMUPQ9GZP8 106 aa12.5□□□□□ -0.41
CDC42EP3-201ENST00000295324 COX6A2Q02221 97 aa12.5□□□□□ -0.41
CDC42EP3-201ENST00000295324 AGRNO00468 2067 aa12.49□□□□□ -0.41
CDC42EP3-201ENST00000295324 MDFIQ99750 246 aa12.48□□□□□ -0.41
CDC42EP3-201ENST00000295324 REG3GQ6UW15 175 aa12.48□□□□□ -0.41
CDC42EP3-201ENST00000295324 LINC01561Q8N1V8 128 aa12.48□□□□□ -0.41
CDC42EP3-201ENST00000295324 LST1O00453 97 aa12.47□□□□□ -0.41
CDC42EP3-201ENST00000295324 WFDC13Q8IUB5 93 aa12.46□□□□□ -0.41
CDC42EP3-201ENST00000295324 URB1-AS1Q96HZ7 61 aa12.46□□□□□ -0.41
CDC42EP3-201ENST00000295324 TRBV10-3A0A0K0K1G6 114 aa12.46□□□□□ -0.41
CDC42EP3-201ENST00000295324 SBSPONQ8IVN8 264 aa12.46□□□□□ -0.42
CDC42EP3-201ENST00000295324 COX7CP15954 63 aa12.46□□□□□ -0.42
CDC42EP3-201ENST00000295324 C10orf25Q5T742 122 aa12.46□□□□□ -0.42
CDC42EP3-201ENST00000295324 CCDC179H3BU77 68 aa12.45□□□□□ -0.42
CDC42EP3-201ENST00000295324 C2orf91Q6ZV80 131 aa12.45□□□□□ -0.42
CDC42EP3-201ENST00000295324 PRR4Q16378 134 aa12.45□□□□□ -0.42
CDC42EP3-201ENST00000295324 LINC01556Q5JQF7 62 aa12.45□□□□□ -0.42
CDC42EP3-201ENST00000295324 Q8N9L7 120 aa12.45□□□□□ -0.42
CDC42EP3-201ENST00000295324 C1orf195Q5TG92 126 aa12.44□□□□□ -0.42
CDC42EP3-201ENST00000295324 KIF25-AS1Q9Y6Z4 181 aa12.44□□□□□ -0.42
CDC42EP3-201ENST00000295324 C1orf137Q5JT78 98 aa12.44□□□□□ -0.42
CDC42EP3-201ENST00000295324 SERP1Q9Y6X1 66 aa12.44□□□□□ -0.42
CDC42EP3-201ENST00000295324 H3BNG1 76 aa12.43□□□□□ -0.42
CDC42EP3-201ENST00000295324 FAM19A4Q96LR4 140 aa12.41□□□□□ -0.42
CDC42EP3-201ENST00000295324 X6R8D5 127 aa12.41□□□□□ -0.42
CDC42EP3-201ENST00000295324 ESRGQ1W209 222 aa12.4□□□□□ -0.42
CDC42EP3-201ENST00000295324 LINC00310P59036 64 aa12.4□□□□□ -0.42
CDC42EP3-201ENST00000295324 XGP55808 180 aa12.39□□□□□ -0.43
CDC42EP3-201ENST00000295324 CIRBP-AS1Q8TBR5 109 aa12.39□□□□□ -0.43
CDC42EP3-201ENST00000295324 PCSK5Q92824 1860 aa12.38□□□□□ -0.43
CDC42EP3-201ENST00000295324 Q6ZRU5 148 aa12.38□□□□□ -0.43
CDC42EP3-201ENST00000295324 FAM30AQ9NZY2 134 aa12.37□□□□□ -0.43
CDC42EP3-201ENST00000295324 Q6JHZ5 121 aa12.36□□□□□ -0.43
CDC42EP3-201ENST00000295324 PRYO14603 147 aa12.36□□□□□ -0.43
CDC42EP3-201ENST00000295324 TSPEAR-AS2P59090 65 aa12.36□□□□□ -0.43
CDC42EP3-201ENST00000295324 PRR3P79522 188 aaKnown RBP12.35□□□□□ -0.43
CDC42EP3-201ENST00000295324 KLK9Q2XQG4 91 aa12.35□□□□□ -0.43
CDC42EP3-201ENST00000295324 SMIM26A0A096LP01 95 aa12.35□□□□□ -0.43
CDC42EP3-201ENST00000295324 COL27A1Q8IZC6 1860 aaPredicted RBP12.34□□□□□ -0.43
CDC42EP3-201ENST00000295324 A0A096LNJ9 63 aa12.34□□□□□ -0.43
CDC42EP3-201ENST00000295324 NTM-AS1Q6ZSK4 140 aa12.34□□□□□ -0.43
CDC42EP3-201ENST00000295324 WWC2-AS2Q96NR7 200 aa12.33□□□□□ -0.44
CDC42EP3-201ENST00000295324 Q8N814 137 aa12.33□□□□□ -0.44
CDC42EP3-201ENST00000295324 A0A096LNT2 108 aa12.31□□□□□ -0.44
CDC42EP3-201ENST00000295324 LINC00315P59091 139 aa12.31□□□□□ -0.44
CDC42EP3-201ENST00000295324 ADAMTSL4-AS1Q5T5F5 129 aa12.31□□□□□ -0.44
CDC42EP3-201ENST00000295324 Q8NAQ8 132 aa12.3□□□□□ -0.44
CDC42EP3-201ENST00000295324 Q6Q795 121 aa12.3□□□□□ -0.44
CDC42EP3-201ENST00000295324 IGHV3OR16-9A0A0B4J2B5 98 aa12.28□□□□□ -0.44
CDC42EP3-201ENST00000295324 Q9BRP9 147 aa12.28□□□□□ -0.44
CDC42EP3-201ENST00000295324 TRAV7A0A075B6U4 112 aa12.27□□□□□ -0.44
CDC42EP3-201ENST00000295324 C22orf24Q9Y442 160 aa12.26□□□□□ -0.45
CDC42EP3-201ENST00000295324 NBDYA0A0U1RRE5 68 aa12.26□□□□□ -0.45
CDC42EP3-201ENST00000295324 PMAIP1Q13794 54 aa12.24□□□□□ -0.45
CDC42EP3-201ENST00000295324 SOSTDC1Q6X4U4 206 aa12.24□□□□□ -0.45
CDC42EP3-201ENST00000295324 MGAM2Q2M2H8 2515 aa12.24□□□□□ -0.45
CDC42EP3-201ENST00000295324 IGLV5-39A0A0G2JS06 123 aa12.23□□□□□ -0.45
CDC42EP3-201ENST00000295324 PRRC2CQ9Y520 2896 aaKnown RBP12.23□□□□□ -0.45
CDC42EP3-201ENST00000295324 MUC4Q99102 2169 aa12.22□□□□□ -0.45
CDC42EP3-201ENST00000295324 PRLHP81277 87 aa12.21□□□□□ -0.45
CDC42EP3-201ENST00000295324 LINC00208Q96KT6 92 aa12.21□□□□□ -0.45
CDC42EP3-201ENST00000295324 A0A087WYN8 130 aa12.2□□□□□ -0.46
CDC42EP3-201ENST00000295324 Q6ZVQ6 151 aa12.2□□□□□ -0.46
CDC42EP3-201ENST00000295324 SPATA3Q8NHX4 192 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms