RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 CELA1Q9UNI1 258 aa11.86□□□□□ -0.51
SH3RF1-201ENST00000284637 AMELXQ99217 191 aa11.85□□□□□ -0.51
SH3RF1-201ENST00000284637 PRO3102Q9H379 93 aa11.85□□□□□ -0.51
SH3RF1-201ENST00000284637 PTPRSQ13332 1948 aa11.85□□□□□ -0.51
SH3RF1-201ENST00000284637 FAM30AQ9NZY2 134 aa11.85□□□□□ -0.51
SH3RF1-201ENST00000284637 DHRS4-AS1Q9P1J3 65 aa11.85□□□□□ -0.51
SH3RF1-201ENST00000284637 MRGPRG-AS1Q2M3A8 158 aa11.84□□□□□ -0.51
SH3RF1-201ENST00000284637 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.84□□□□□ -0.51
SH3RF1-201ENST00000284637 Q8N814 137 aa11.84□□□□□ -0.51
SH3RF1-201ENST00000284637 IGLV4-60A0A075B6I1 120 aa11.84□□□□□ -0.51
SH3RF1-201ENST00000284637 KIR2DL5BQ8NHK3 375 aa11.84□□□□□ -0.51
SH3RF1-201ENST00000284637 TRBV10-3A0A0K0K1G6 114 aa11.82□□□□□ -0.52
SH3RF1-201ENST00000284637 SPINK6Q6UWN8 80 aa11.82□□□□□ -0.52
SH3RF1-201ENST00000284637 TMEM254Q8TBM7 123 aa11.81□□□□□ -0.52
SH3RF1-201ENST00000284637 ANKRD11Q6UB99 2663 aaPredicted RBP11.81□□□□□ -0.52
SH3RF1-201ENST00000284637 ESRGQ1W209 222 aa11.8□□□□□ -0.52
SH3RF1-201ENST00000284637 Q6ZSN1 163 aa11.8□□□□□ -0.52
SH3RF1-201ENST00000284637 ZNF462Q96JM2 2506 aa11.79□□□□□ -0.52
SH3RF1-201ENST00000284637 LRP4O75096 1905 aa11.79□□□□□ -0.52
SH3RF1-201ENST00000284637 PSPHP1O15172 72 aa11.78□□□□□ -0.52
SH3RF1-201ENST00000284637 TRAV10A0A0B4J240 114 aa11.77□□□□□ -0.53
SH3RF1-201ENST00000284637 A0A1W2PPR1 153 aa11.76□□□□□ -0.53
SH3RF1-201ENST00000284637 MUC7Q8TAX7 377 aa11.76□□□□□ -0.53
SH3RF1-201ENST00000284637 NHLRC4P0CG21 123 aaPredicted RBP11.76□□□□□ -0.53
SH3RF1-201ENST00000284637 BCE1O60756 84 aa11.75□□□□□ -0.53
SH3RF1-201ENST00000284637 ZNF843Q8N446 348 aa11.75□□□□□ -0.53
SH3RF1-201ENST00000284637 LY6G6DO95868 133 aa11.75□□□□□ -0.53
SH3RF1-201ENST00000284637 PRR15LQ9BU68 103 aa11.75□□□□□ -0.53
SH3RF1-201ENST00000284637 Q8N9L7 120 aa11.74□□□□□ -0.53
SH3RF1-201ENST00000284637 EXPH5Q8NEV8 1989 aa11.74□□□□□ -0.53
SH3RF1-201ENST00000284637 Q6ZVQ6 151 aa11.74□□□□□ -0.53
SH3RF1-201ENST00000284637 CPAMD8Q8IZJ3 1885 aa11.74□□□□□ -0.53
SH3RF1-201ENST00000284637 IGLV9-49A0A0B4J1Y8 123 aa11.72□□□□□ -0.53
SH3RF1-201ENST00000284637 LINC01547P58512 204 aaPredicted RBP11.72□□□□□ -0.53
SH3RF1-201ENST00000284637 NANOS2P60321 138 aaKnown RBP11.72□□□□□ -0.53
SH3RF1-201ENST00000284637 FHL2Q14192 279 aa11.72□□□□□ -0.53
SH3RF1-201ENST00000284637 FHL3Q13643 280 aa11.71□□□□□ -0.53
SH3RF1-201ENST00000284637 EGFEM1PQ0D2K5 195 aa11.71□□□□□ -0.53
SH3RF1-201ENST00000284637 C1orf137Q5JT78 98 aa11.71□□□□□ -0.53
SH3RF1-201ENST00000284637 IGHV4-30-4P0DP06 118 aa11.71□□□□□ -0.54
SH3RF1-201ENST00000284637 IL17DQ8TAD2 202 aa11.71□□□□□ -0.54
SH3RF1-201ENST00000284637 M0R2N4 97 aa11.7□□□□□ -0.54
SH3RF1-201ENST00000284637 A8MTW9 85 aa11.7□□□□□ -0.54
SH3RF1-201ENST00000284637 OXLD1Q5BKU9 147 aa11.7□□□□□ -0.54
SH3RF1-201ENST00000284637 LINC00208Q96KT6 92 aa11.7□□□□□ -0.54
SH3RF1-201ENST00000284637 MTORP42345 2549 aa11.69□□□□□ -0.54
SH3RF1-201ENST00000284637 C6orf223Q8N319 242 aa11.69□□□□□ -0.54
SH3RF1-201ENST00000284637 KIF25-AS1Q9Y6Z4 181 aa11.69□□□□□ -0.54
SH3RF1-201ENST00000284637 BEAN1Q3B7T3 259 aa11.69□□□□□ -0.54
SH3RF1-201ENST00000284637 RAI1Q7Z5J4 1906 aaPredicted RBP11.69□□□□□ -0.54
SH3RF1-201ENST00000284637 CXCL6P80162 114 aa11.69□□□□□ -0.54
SH3RF1-201ENST00000284637 LINC00337Q8N6G1 96 aa11.69□□□□□ -0.54
SH3RF1-201ENST00000284637 TET2Q6N021 2002 aaPredicted RBP11.68□□□□□ -0.54
SH3RF1-201ENST00000284637 IGLV1-51P01701 117 aa11.68□□□□□ -0.54
SH3RF1-201ENST00000284637 KRTAP10-9P60411 292 aa11.68□□□□□ -0.54
SH3RF1-201ENST00000284637 GOLGB1Q14789 3259 aaKnown RBP11.68□□□□□ -0.54
SH3RF1-201ENST00000284637 LRRK2Q5S007 2527 aa11.68□□□□□ -0.54
SH3RF1-201ENST00000284637 COL5A1P20908 1838 aaPredicted RBP11.68□□□□□ -0.54
SH3RF1-201ENST00000284637 PLAC8L1A1L4L8 177 aa11.67□□□□□ -0.54
SH3RF1-201ENST00000284637 SPTBN4Q9H254 2564 aa11.66□□□□□ -0.54
SH3RF1-201ENST00000284637 PLA2G2AP14555 144 aa11.66□□□□□ -0.54
SH3RF1-201ENST00000284637 MUC4Q99102 2169 aa11.66□□□□□ -0.54
SH3RF1-201ENST00000284637 LINC00575Q6W349 94 aa11.66□□□□□ -0.54
SH3RF1-201ENST00000284637 Q8N2B8 174 aa11.65□□□□□ -0.54
SH3RF1-201ENST00000284637 CHD8Q9HCK8 2581 aa11.65□□□□□ -0.54
SH3RF1-201ENST00000284637 BRI3O95415 125 aa11.65□□□□□ -0.55
SH3RF1-201ENST00000284637 SMR3AQ99954 134 aa11.64□□□□□ -0.55
SH3RF1-201ENST00000284637 K7ERS5 55 aa11.63□□□□□ -0.55
SH3RF1-201ENST00000284637 FAM19A4Q96LR4 140 aa11.63□□□□□ -0.55
SH3RF1-201ENST00000284637 IGLV5-39A0A0G2JS06 123 aa11.62□□□□□ -0.55
SH3RF1-201ENST00000284637 ZNF706Q9Y5V0 76 aaPredicted RBP11.62□□□□□ -0.55
SH3RF1-201ENST00000284637 ADAMTS20P59510 1910 aa11.62□□□□□ -0.55
SH3RF1-201ENST00000284637 C7orf33Q8WU49 177 aa11.62□□□□□ -0.55
SH3RF1-201ENST00000284637 C10orf25Q5T742 122 aa11.61□□□□□ -0.55
SH3RF1-201ENST00000284637 LINC00315P59091 139 aa11.6□□□□□ -0.55
SH3RF1-201ENST00000284637 A0A1B0GUV1 79 aa11.59□□□□□ -0.55
SH3RF1-201ENST00000284637 DEFB116Q30KQ4 102 aa11.59□□□□□ -0.55
SH3RF1-201ENST00000284637 Q6ZTC4 211 aa11.59□□□□□ -0.55
SH3RF1-201ENST00000284637 FAM218AQ96MZ4 157 aa11.59□□□□□ -0.55
SH3RF1-201ENST00000284637 REG3GQ6UW15 175 aa11.58□□□□□ -0.56
SH3RF1-201ENST00000284637 LIMD2Q9BT23 127 aa11.58□□□□□ -0.56
SH3RF1-201ENST00000284637 A0A087WSZ3 146 aa11.57□□□□□ -0.56
SH3RF1-201ENST00000284637 POLQO75417 2590 aa11.56□□□□□ -0.56
SH3RF1-201ENST00000284637 SMCR5Q8TEV8 140 aa11.56□□□□□ -0.56
SH3RF1-201ENST00000284637 PCOTHQ58A44 107 aa11.55□□□□□ -0.56
SH3RF1-201ENST00000284637 C11orf72Q8NBR9 251 aa11.54□□□□□ -0.56
SH3RF1-201ENST00000284637 IGHV6-1A0A0B4J1U7 121 aa11.53□□□□□ -0.56
SH3RF1-201ENST00000284637 hDV103S1A0JD37 113 aa11.53□□□□□ -0.56
SH3RF1-201ENST00000284637 LINC00474Q9P2X8 69 aa11.52□□□□□ -0.56
SH3RF1-201ENST00000284637 Q6ZRU5 148 aa11.52□□□□□ -0.57
SH3RF1-201ENST00000284637 Q9UF83 564 aa11.52□□□□□ -0.57
SH3RF1-201ENST00000284637 IGHV3OR16-9A0A0B4J2B5 98 aa11.51□□□□□ -0.57
SH3RF1-201ENST00000284637 Q9BRP9 147 aa11.51□□□□□ -0.57
SH3RF1-201ENST00000284637 IGLV5-45A0A087WSX0 123 aa11.51□□□□□ -0.57
SH3RF1-201ENST00000284637 LYPD5Q6UWN5 251 aa11.51□□□□□ -0.57
SH3RF1-201ENST00000284637 LINC00336Q6ZUF6 198 aa11.5□□□□□ -0.57
SH3RF1-201ENST00000284637 PRRC2CQ9Y520 2896 aaKnown RBP11.49□□□□□ -0.57
SH3RF1-201ENST00000284637 PTPRBP23467 1997 aa11.49□□□□□ -0.57
SH3RF1-201ENST00000284637 F8WDY8 70 aa11.49□□□□□ -0.57
SH3RF1-201ENST00000284637 SPATA3Q8NHX4 192 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms