RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 MUC6Q6W4X9 2439 aa12.06□□□□□ -0.48
TSPAN3-201ENST00000267970 LINC01556Q5JQF7 62 aa12.05□□□□□ -0.48
TSPAN3-201ENST00000267970 TECTAO75443 2155 aa12.05□□□□□ -0.48
TSPAN3-201ENST00000267970 RAI1Q7Z5J4 1906 aaPredicted RBP12.05□□□□□ -0.48
TSPAN3-201ENST00000267970 HIVEP3Q5T1R4 2406 aa12.05□□□□□ -0.48
TSPAN3-201ENST00000267970 A0A087WSZ3 146 aa12.05□□□□□ -0.48
TSPAN3-201ENST00000267970 IGLV1-40P01703 118 aa12.04□□□□□ -0.48
TSPAN3-201ENST00000267970 SHISA2Q6UWI4 295 aa12.04□□□□□ -0.48
TSPAN3-201ENST00000267970 Q9BRP9 147 aa12.04□□□□□ -0.48
TSPAN3-201ENST00000267970 PRLHP81277 87 aa12.03□□□□□ -0.48
TSPAN3-201ENST00000267970 ODF3L2Q3SX64 289 aa12.02□□□□□ -0.49
TSPAN3-201ENST00000267970 Q6ZTC4 211 aa12.01□□□□□ -0.49
TSPAN3-201ENST00000267970 CEP192Q8TEP8 1941 aa12.01□□□□□ -0.49
TSPAN3-201ENST00000267970 HCG22E2RYF7 251 aa12.01□□□□□ -0.49
TSPAN3-201ENST00000267970 LINC00846Q9NV44 126 aa12.01□□□□□ -0.49
TSPAN3-201ENST00000267970 TMEM254Q8TBM7 123 aa12□□□□□ -0.49
TSPAN3-201ENST00000267970 KRTAP10-9P60411 292 aa12□□□□□ -0.49
TSPAN3-201ENST00000267970 FSTL3O95633 263 aa11.99□□□□□ -0.49
TSPAN3-201ENST00000267970 RPL28P46779 137 aaKnown RBP11.99□□□□□ -0.49
TSPAN3-201ENST00000267970 IGLV8-61A0A075B6I0 122 aa11.99□□□□□ -0.49
TSPAN3-201ENST00000267970 NOTCH2Q04721 2471 aa11.98□□□□□ -0.49
TSPAN3-201ENST00000267970 FHL2Q14192 279 aa11.97□□□□□ -0.49
TSPAN3-201ENST00000267970 A0A096LNJ9 63 aa11.97□□□□□ -0.49
TSPAN3-201ENST00000267970 IGLV5-52A0A0A0MRZ9 124 aa11.97□□□□□ -0.49
TSPAN3-201ENST00000267970 AGRNO00468 2067 aa11.96□□□□□ -0.49
TSPAN3-201ENST00000267970 SPAG11AQ6PDA7 123 aa11.96□□□□□ -0.49
TSPAN3-201ENST00000267970 IGKV2D-30A0A075B6S6 120 aa11.96□□□□□ -0.5
TSPAN3-201ENST00000267970 IGKV2-30P06310 120 aa11.96□□□□□ -0.5
TSPAN3-201ENST00000267970 TET2Q6N021 2002 aaPredicted RBP11.96□□□□□ -0.5
TSPAN3-201ENST00000267970 SMIM29Q86T20 159 aa11.95□□□□□ -0.5
TSPAN3-201ENST00000267970 CNFNQ9BYD5 112 aa11.94□□□□□ -0.5
TSPAN3-201ENST00000267970 C2CD3Q4AC94 2353 aa11.93□□□□□ -0.5
TSPAN3-201ENST00000267970 C1orf64Q8NEQ6 169 aa11.93□□□□□ -0.5
TSPAN3-201ENST00000267970 C7orf65Q6ZTY9 151 aa11.92□□□□□ -0.5
TSPAN3-201ENST00000267970 EGFEM1PQ0D2K5 195 aa11.92□□□□□ -0.5
TSPAN3-201ENST00000267970 SPINT4Q6UDR6 99 aa11.92□□□□□ -0.5
TSPAN3-201ENST00000267970 NUPR2A6NF83 97 aa11.92□□□□□ -0.5
TSPAN3-201ENST00000267970 PRO0628Q9UI54 55 aa11.91□□□□□ -0.5
TSPAN3-201ENST00000267970 LINC00474Q9P2X8 69 aa11.91□□□□□ -0.5
TSPAN3-201ENST00000267970 ANKHD1Q8IWZ3 2542 aaKnown RBP11.9□□□□□ -0.5
TSPAN3-201ENST00000267970 Q6ZRU5 148 aa11.9□□□□□ -0.5
TSPAN3-201ENST00000267970 NAV3Q8IVL0 2385 aa11.9□□□□□ -0.5
TSPAN3-201ENST00000267970 A0A1B0GU69 56 aa11.9□□□□□ -0.5
TSPAN3-201ENST00000267970 LINC00337Q8N6G1 96 aa11.9□□□□□ -0.5
TSPAN3-201ENST00000267970 CDIP1Q9H305 208 aa11.9□□□□□ -0.51
TSPAN3-201ENST00000267970 AMELXQ99217 191 aa11.88□□□□□ -0.51
TSPAN3-201ENST00000267970 FSHBP01225 129 aa11.88□□□□□ -0.51
TSPAN3-201ENST00000267970 LRP4O75096 1905 aa11.87□□□□□ -0.51
TSPAN3-201ENST00000267970 MUC7Q8TAX7 377 aa11.85□□□□□ -0.51
TSPAN3-201ENST00000267970 KIAA0087Q14695 138 aa11.85□□□□□ -0.51
TSPAN3-201ENST00000267970 COL4A4P53420 1690 aaPredicted RBP11.84□□□□□ -0.51
TSPAN3-201ENST00000267970 C2orf48Q96LS8 159 aa11.83□□□□□ -0.52
TSPAN3-201ENST00000267970 LYPD5Q6UWN5 251 aa11.83□□□□□ -0.52
TSPAN3-201ENST00000267970 ABCA2Q9BZC7 2435 aa11.83□□□□□ -0.52
TSPAN3-201ENST00000267970 PTPRSQ13332 1948 aa11.82□□□□□ -0.52
TSPAN3-201ENST00000267970 Q8N2B8 174 aa11.82□□□□□ -0.52
TSPAN3-201ENST00000267970 LTBP2Q14767 1821 aa11.82□□□□□ -0.52
TSPAN3-201ENST00000267970 SMCR5Q8TEV8 140 aa11.81□□□□□ -0.52
TSPAN3-201ENST00000267970 ACACBO00763 2458 aa11.81□□□□□ -0.52
TSPAN3-201ENST00000267970 IGLV1-51P01701 117 aa11.8□□□□□ -0.52
TSPAN3-201ENST00000267970 A0A1W2PPR1 153 aa11.8□□□□□ -0.52
TSPAN3-201ENST00000267970 hDV103S1A0JD37 113 aa11.8□□□□□ -0.52
TSPAN3-201ENST00000267970 COL5A1P20908 1838 aaPredicted RBP11.8□□□□□ -0.52
TSPAN3-201ENST00000267970 C22orf24Q9Y442 160 aa11.8□□□□□ -0.52
TSPAN3-201ENST00000267970 DOPEY1Q5JWR5 2465 aa11.79□□□□□ -0.52
TSPAN3-201ENST00000267970 LIMD2Q9BT23 127 aa11.79□□□□□ -0.52
TSPAN3-201ENST00000267970 CPAMD8Q8IZJ3 1885 aa11.79□□□□□ -0.52
TSPAN3-201ENST00000267970 ATP11AUNQ6ZP68 121 aa11.78□□□□□ -0.52
TSPAN3-201ENST00000267970 SPACA4Q8TDM5 124 aa11.78□□□□□ -0.52
TSPAN3-201ENST00000267970 SPATA3Q8NHX4 192 aa11.77□□□□□ -0.52
TSPAN3-201ENST00000267970 FAM218AQ96MZ4 157 aa11.77□□□□□ -0.52
TSPAN3-201ENST00000267970 PIEZO2Q9H5I5 2752 aa11.76□□□□□ -0.53
TSPAN3-201ENST00000267970 RPL37AP61513 92 aaKnown RBP11.76□□□□□ -0.53
TSPAN3-201ENST00000267970 SMCPP49901 116 aaPredicted RBP11.75□□□□□ -0.53
TSPAN3-201ENST00000267970 CHTF8P0CG12 524 aa11.74□□□□□ -0.53
TSPAN3-201ENST00000267970 VPREB1P12018 145 aa11.74□□□□□ -0.53
TSPAN3-201ENST00000267970 MOBPQ13875 183 aa11.73□□□□□ -0.53
TSPAN3-201ENST00000267970 SSBP3-AS1Q7Z2R9 100 aa11.73□□□□□ -0.53
TSPAN3-201ENST00000267970 CACNA1AO00555 2505 aa11.72□□□□□ -0.53
TSPAN3-201ENST00000267970 C1orf134Q5TEV5 83 aa11.71□□□□□ -0.54
TSPAN3-201ENST00000267970 CXCL6P80162 114 aa11.7□□□□□ -0.54
TSPAN3-201ENST00000267970 C6orf48Q9UBA6 75 aa11.7□□□□□ -0.54
TSPAN3-201ENST00000267970 WDR87Q6ZQQ6 2873 aa11.7□□□□□ -0.54
TSPAN3-201ENST00000267970 MDFIQ99750 246 aa11.69□□□□□ -0.54
TSPAN3-201ENST00000267970 ADAMTS20P59510 1910 aa11.69□□□□□ -0.54
TSPAN3-201ENST00000267970 C8orf87E5RJ46 101 aa11.68□□□□□ -0.54
TSPAN3-201ENST00000267970 CCDC168Q8NDH2 2452 aa11.68□□□□□ -0.54
TSPAN3-201ENST00000267970 ACYP2P14621 99 aa11.67□□□□□ -0.54
TSPAN3-201ENST00000267970 TM2D3Q9BRN9 247 aa11.67□□□□□ -0.54
TSPAN3-201ENST00000267970 TTC28Q96AY4 2481 aa11.67□□□□□ -0.54
TSPAN3-201ENST00000267970 MYO18BQ8IUG5 2567 aa11.67□□□□□ -0.54
TSPAN3-201ENST00000267970 A0A1B0GUV1 79 aa11.66□□□□□ -0.54
TSPAN3-201ENST00000267970 LINC00167Q96N53 147 aa11.66□□□□□ -0.54
TSPAN3-201ENST00000267970 ST20-AS1Q8NBB2 130 aa11.66□□□□□ -0.54
TSPAN3-201ENST00000267970 PHF5AQ7RTV0 110 aaKnown RBP11.65□□□□□ -0.54
TSPAN3-201ENST00000267970 MUC22E2RYF6 1773 aaPredicted RBP11.64□□□□□ -0.55
TSPAN3-201ENST00000267970 KIF25-AS1Q9Y6Z4 181 aa11.63□□□□□ -0.55
TSPAN3-201ENST00000267970 PTPRBP23467 1997 aa11.61□□□□□ -0.55
TSPAN3-201ENST00000267970 C11orf72Q8NBR9 251 aa11.61□□□□□ -0.55
TSPAN3-201ENST00000267970 A8MUN3 132 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms