RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 HERVK_113P63121 156 aa5.4□□□□□ -1.54
TMEM258-201ENST00000257262 SEC11AP67812 179 aa5.4□□□□□ -1.54
TMEM258-201ENST00000257262 KIAA0087Q14695 138 aa5.4□□□□□ -1.54
TMEM258-201ENST00000257262 PMCHL1Q16048 86 aa5.4□□□□□ -1.54
TMEM258-201ENST00000257262 LINC01561Q8N1V8 128 aa5.4□□□□□ -1.54
TMEM258-201ENST00000257262 LOC107984640A0A0U1RRK4 108 aa5.39□□□□□ -1.55
TMEM258-201ENST00000257262 COLCA2A8K830 154 aa5.39□□□□□ -1.55
TMEM258-201ENST00000257262 F8WDY8 70 aa5.39□□□□□ -1.55
TMEM258-201ENST00000257262 HBDP02042 147 aa5.39□□□□□ -1.55
TMEM258-201ENST00000257262 TRGC2P03986 189 aa5.39□□□□□ -1.55
TMEM258-201ENST00000257262 PMVKQ15126 192 aa5.39□□□□□ -1.55
TMEM258-201ENST00000257262 RNF151Q2KHN1 245 aa5.39□□□□□ -1.55
TMEM258-201ENST00000257262 C10orf25Q5T742 122 aa5.39□□□□□ -1.55
TMEM258-201ENST00000257262 UNQ6190/PRO20217Q6UXQ8 127 aa5.39□□□□□ -1.55
TMEM258-201ENST00000257262 STPG4Q8N801 248 aa5.39□□□□□ -1.55
TMEM258-201ENST00000257262 CST9LQ9H4G1 147 aa5.39□□□□□ -1.55
TMEM258-201ENST00000257262 GEMIN7Q9H840 131 aaKnown RBP5.39□□□□□ -1.55
TMEM258-201ENST00000257262 MRPL35Q9NZE8 188 aaKnown RBP5.39□□□□□ -1.55
TMEM258-201ENST00000257262 PLAC8Q9NZF1 115 aa5.39□□□□□ -1.55
TMEM258-201ENST00000257262 CDKN2A-AS1Q9UH64 79 aa5.39□□□□□ -1.55
TMEM258-201ENST00000257262 PKIGQ9Y2B9 76 aa5.39□□□□□ -1.55
TMEM258-201ENST00000257262 FAT1Q14517 4588 aa5.39□□□□□ -1.55
TMEM258-201ENST00000257262 TINCRA0A1B0GVN0 87 aa5.38□□□□□ -1.55
TMEM258-201ENST00000257262 NDUFA1O15239 70 aa5.38□□□□□ -1.55
TMEM258-201ENST00000257262 KRTAP10-4P60372 401 aaPredicted RBP5.38□□□□□ -1.55
TMEM258-201ENST00000257262 GAGE2BQ13066 116 aa5.38□□□□□ -1.55
TMEM258-201ENST00000257262 PDZD11Q5EBL8 140 aa5.38□□□□□ -1.55
TMEM258-201ENST00000257262 C2orf82Q6UX34 121 aa5.38□□□□□ -1.55
TMEM258-201ENST00000257262 TOMM7Q9P0U1 55 aa5.38□□□□□ -1.55
TMEM258-201ENST00000257262 LINC00474Q9P2X8 69 aa5.38□□□□□ -1.55
TMEM258-201ENST00000257262 PLA2G2DQ9UNK4 145 aa5.38□□□□□ -1.55
TMEM258-201ENST00000257262 PRSS2P07478 247 aa5.37□□□□□ -1.55
TMEM258-201ENST00000257262 PTTG1IPP53801 180 aa5.37□□□□□ -1.55
TMEM258-201ENST00000257262 NDUFA6P56556 154 aa5.37□□□□□ -1.55
TMEM258-201ENST00000257262 C6orf226Q5I0X4 101 aa5.37□□□□□ -1.55
TMEM258-201ENST00000257262 CHCHD1Q96BP2 118 aaKnown RBP5.37□□□□□ -1.55
TMEM258-201ENST00000257262 PACRGQ96M98 296 aaPredicted RBP5.37□□□□□ -1.55
TMEM258-201ENST00000257262 C6orf48Q9UBA6 75 aa5.37□□□□□ -1.55
TMEM258-201ENST00000257262 IGLV5-45A0A087WSX0 123 aa5.36□□□□□ -1.55
TMEM258-201ENST00000257262 SCO1O75880 301 aa5.36□□□□□ -1.55
TMEM258-201ENST00000257262 RPL37AP61513 92 aaKnown RBP5.36□□□□□ -1.55
TMEM258-201ENST00000257262 RPL18AQ02543 176 aaKnown RBP5.36□□□□□ -1.55
TMEM258-201ENST00000257262 LCE5AQ5TCM9 118 aa5.36□□□□□ -1.55
TMEM258-201ENST00000257262 BAGE3Q86Y29 109 aa5.36□□□□□ -1.55
TMEM258-201ENST00000257262 Q8IZM0 81 aa5.36□□□□□ -1.55
TMEM258-201ENST00000257262 LINC00469Q8N7U9 141 aa5.36□□□□□ -1.55
TMEM258-201ENST00000257262 UBR4Q5T4S7 5183 aa5.35□□□□□ -1.55
TMEM258-201ENST00000257262 A0A1W2PNN7 141 aa5.35□□□□□ -1.55
TMEM258-201ENST00000257262 SMIM1B2RUZ4 78 aa5.35□□□□□ -1.55
TMEM258-201ENST00000257262 ATP5LO75964 103 aa5.35□□□□□ -1.55
TMEM258-201ENST00000257262 TLX1NBP0CAT3 122 aa5.35□□□□□ -1.55
TMEM258-201ENST00000257262 CKS1BP61024 79 aa5.35□□□□□ -1.55
TMEM258-201ENST00000257262 Q6ZRP5 223 aa5.35□□□□□ -1.55
TMEM258-201ENST00000257262 FAM19A2Q8N3H0 131 aa5.35□□□□□ -1.55
TMEM258-201ENST00000257262 KRTAP4-2Q9BYR5 136 aa5.35□□□□□ -1.55
TMEM258-201ENST00000257262 TRBV30A0A0K0K1B3 111 aa5.34□□□□□ -1.55
TMEM258-201ENST00000257262 HSBP1O75506 76 aa5.34□□□□□ -1.55
TMEM258-201ENST00000257262 SPINK8P0C7L1 97 aa5.34□□□□□ -1.55
TMEM258-201ENST00000257262 IGLC3P0DOY3 106 aa5.34□□□□□ -1.55
TMEM258-201ENST00000257262 C9orf116Q5BN46 136 aaPredicted RBP5.34□□□□□ -1.55
TMEM258-201ENST00000257262 COX7B2Q8TF08 81 aa5.34□□□□□ -1.55
TMEM258-201ENST00000257262 C7orf33Q8WU49 177 aa5.34□□□□□ -1.55
TMEM258-201ENST00000257262 KRTAP9-3Q9BYQ3 159 aa5.34□□□□□ -1.55
TMEM258-201ENST00000257262 KRTAP4-11Q9BYQ6 195 aa5.34□□□□□ -1.55
TMEM258-201ENST00000257262 NUPR1O60356 82 aa5.33□□□□□ -1.56
TMEM258-201ENST00000257262 SERF1AO75920 110 aa5.33□□□□□ -1.56
TMEM258-201ENST00000257262 GAGE2EQ4V326 116 aa5.33□□□□□ -1.56
TMEM258-201ENST00000257262 IFI27L1Q96BM0 104 aa5.33□□□□□ -1.56
TMEM258-201ENST00000257262 GAGE2DQ9UEU5 116 aa5.33□□□□□ -1.56
TMEM258-201ENST00000257262 VPS13BQ7Z7G8 4022 aa5.32□□□□□ -1.56
TMEM258-201ENST00000257262 GAGE10A6NGK3 116 aa5.32□□□□□ -1.56
TMEM258-201ENST00000257262 NDUFC2-KCTD14E9PQ53 114 aa5.32□□□□□ -1.56
TMEM258-201ENST00000257262 F8VRH5 84 aa5.32□□□□□ -1.56
TMEM258-201ENST00000257262 H3BRM9 83 aa5.32□□□□□ -1.56
TMEM258-201ENST00000257262 ZNF22P17026 224 aaPredicted RBP5.32□□□□□ -1.56
TMEM258-201ENST00000257262 HNRNPA3P51991 378 aaKnown RBP5.32□□□□□ -1.56
TMEM258-201ENST00000257262 CHTOPQ9Y3Y2 248 aaKnown RBP5.32□□□□□ -1.56
TMEM258-201ENST00000257262 TRAV12-1A0A0B4J245 112 aa5.31□□□□□ -1.56
TMEM258-201ENST00000257262 FAM168BA1KXE4 195 aa5.31□□□□□ -1.56
TMEM258-201ENST00000257262 C11orf86A6NJI1 115 aa5.31□□□□□ -1.56
TMEM258-201ENST00000257262 CXCL5P42830 114 aa5.31□□□□□ -1.56
TMEM258-201ENST00000257262 TMEM170BQ5T4T1 132 aa5.31□□□□□ -1.56
TMEM258-201ENST00000257262 PHF5AQ7RTV0 110 aaKnown RBP5.31□□□□□ -1.56
TMEM258-201ENST00000257262 IGLV5-39A0A0G2JS06 123 aa5.3□□□□□ -1.56
TMEM258-201ENST00000257262 LEPROTL1O95214 131 aa5.3□□□□□ -1.56
TMEM258-201ENST00000257262 FABP4P15090 132 aa5.3□□□□□ -1.56
TMEM258-201ENST00000257262 C9orf129Q5T035 196 aaKnown RBP5.3□□□□□ -1.56
TMEM258-201ENST00000257262 KRTAP7-1Q8IUC3 87 aa5.3□□□□□ -1.56
TMEM258-201ENST00000257262 H0Y8G0 127 aa5.29□□□□□ -1.56
TMEM258-201ENST00000257262 HIST1H2BKO60814 126 aa5.29□□□□□ -1.56
TMEM258-201ENST00000257262 HIST1H2BJP06899 126 aa5.29□□□□□ -1.56
TMEM258-201ENST00000257262 HIST1H2BOP23527 126 aa5.29□□□□□ -1.56
TMEM258-201ENST00000257262 HIST1H2BBP33778 126 aa5.29□□□□□ -1.56
TMEM258-201ENST00000257262 HIST1H2BDP58876 126 aa5.29□□□□□ -1.56
TMEM258-201ENST00000257262 HIST1H2BCP62807 126 aa5.29□□□□□ -1.56
TMEM258-201ENST00000257262 PRR3P79522 188 aaKnown RBP5.29□□□□□ -1.56
TMEM258-201ENST00000257262 HIST2H2BEQ16778 126 aa5.29□□□□□ -1.56
TMEM258-201ENST00000257262 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.29□□□□□ -1.56
TMEM258-201ENST00000257262 PET117Q6UWS5 81 aa5.29□□□□□ -1.56
TMEM258-201ENST00000257262 FAM19A5Q7Z5A7 132 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms