RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 RPS10P5Q9NQ39 176 aa6.3□□□□□ -1.4
VPS50-201ENST00000251739 TRBV24-1A0A075B6N3 115 aa6.29□□□□□ -1.4
VPS50-201ENST00000251739 TRAV13-1A0A0B4J241 112 aa6.29□□□□□ -1.4
VPS50-201ENST00000251739 NDUFA6P56556 154 aa6.29□□□□□ -1.4
VPS50-201ENST00000251739 SPAG11BQ08648 103 aa6.29□□□□□ -1.4
VPS50-201ENST00000251739 SMAGPQ0VAQ4 97 aa6.29□□□□□ -1.4
VPS50-201ENST00000251739 RIGQ13278 110 aa6.29□□□□□ -1.4
VPS50-201ENST00000251739 MRPL51Q4U2R6 128 aaKnown RBP6.29□□□□□ -1.4
VPS50-201ENST00000251739 FAM104BQ5XKR9 115 aa6.29□□□□□ -1.4
VPS50-201ENST00000251739 C5orf38Q86SI9 138 aa6.29□□□□□ -1.4
VPS50-201ENST00000251739 PACRGQ96M98 296 aaPredicted RBP6.29□□□□□ -1.4
VPS50-201ENST00000251739 KIR2DL4Q99706 377 aa6.29□□□□□ -1.4
VPS50-201ENST00000251739 SPANXA1Q9NS26 97 aa6.29□□□□□ -1.4
VPS50-201ENST00000251739 TGIF2-C20orf24A0A0A6YYL0 155 aa6.28□□□□□ -1.4
VPS50-201ENST00000251739 IGHV3OR16-9A0A0B4J2B5 98 aa6.28□□□□□ -1.4
VPS50-201ENST00000251739 TMEM18Q96B42 140 aa6.28□□□□□ -1.4
VPS50-201ENST00000251739 C20orf78Q9BR46 151 aa6.28□□□□□ -1.4
VPS50-201ENST00000251739 EIF5A2Q9GZV4 153 aaKnown RBP6.28□□□□□ -1.4
VPS50-201ENST00000251739 MRPL35Q9NZE8 188 aaKnown RBP6.28□□□□□ -1.4
VPS50-201ENST00000251739 F8WDY8 70 aa6.27□□□□□ -1.41
VPS50-201ENST00000251739 MT-ND6P03923 174 aa6.27□□□□□ -1.41
VPS50-201ENST00000251739 RPL23P62829 140 aaKnown RBP6.27□□□□□ -1.41
VPS50-201ENST00000251739 RPL39P62891 51 aaKnown RBP6.27□□□□□ -1.41
VPS50-201ENST00000251739 RPL18AQ02543 176 aaKnown RBP6.27□□□□□ -1.41
VPS50-201ENST00000251739 UBE2V1Q13404 147 aa6.27□□□□□ -1.41
VPS50-201ENST00000251739 PHF5AQ7RTV0 110 aaKnown RBP6.27□□□□□ -1.41
VPS50-201ENST00000251739 KRTAP11-1Q8IUC1 163 aa6.27□□□□□ -1.41
VPS50-201ENST00000251739 HIST3H2BBQ8N257 126 aa6.27□□□□□ -1.41
VPS50-201ENST00000251739 SNHG12Q9BXW3 62 aa6.27□□□□□ -1.41
VPS50-201ENST00000251739 NAT8BQ9UHF3 227 aa6.27□□□□□ -1.41
VPS50-201ENST00000251739 SMIM27A0A1W2PRY6 76 aa6.26□□□□□ -1.41
VPS50-201ENST00000251739 NPSP0C0P6 89 aa6.26□□□□□ -1.41
VPS50-201ENST00000251739 TLX1NBP0CAT3 122 aa6.26□□□□□ -1.41
VPS50-201ENST00000251739 MRPS36P82909 103 aaKnown RBP6.26□□□□□ -1.41
VPS50-201ENST00000251739 OPRPNQ99935 248 aaPredicted RBP6.26□□□□□ -1.41
VPS50-201ENST00000251739 ALKBH7Q9BT30 221 aaPredicted RBP6.26□□□□□ -1.41
VPS50-201ENST00000251739 SMIM2Q9BVW6 85 aa6.26□□□□□ -1.41
VPS50-201ENST00000251739 PRO1933Q9H354 126 aa6.26□□□□□ -1.41
VPS50-201ENST00000251739 A0A1B0GW15 77 aa6.25□□□□□ -1.41
VPS50-201ENST00000251739 C9JQL5 133 aa6.25□□□□□ -1.41
VPS50-201ENST00000251739 IGLV7-43P04211 117 aa6.25□□□□□ -1.41
VPS50-201ENST00000251739 C1orf137Q5JT78 98 aa6.25□□□□□ -1.41
VPS50-201ENST00000251739 C10orf25Q5T742 122 aa6.25□□□□□ -1.41
VPS50-201ENST00000251739 KRTAP7-1Q8IUC3 87 aa6.25□□□□□ -1.41
VPS50-201ENST00000251739 MIEN1Q9BRT3 115 aa6.25□□□□□ -1.41
VPS50-201ENST00000251739 KRTAP4-2Q9BYR5 136 aa6.25□□□□□ -1.41
VPS50-201ENST00000251739 A0A1B0GXF2 115 aa6.24□□□□□ -1.41
VPS50-201ENST00000251739 FAM168BA1KXE4 195 aa6.24□□□□□ -1.41
VPS50-201ENST00000251739 TNFRSF6BO95407 300 aa6.24□□□□□ -1.41
VPS50-201ENST00000251739 CKS2P33552 79 aa6.24□□□□□ -1.41
VPS50-201ENST00000251739 IMMP2LQ96T52 175 aa6.24□□□□□ -1.41
VPS50-201ENST00000251739 C6orf48Q9UBA6 75 aa6.24□□□□□ -1.41
VPS50-201ENST00000251739 NAT8Q9UHE5 227 aa6.24□□□□□ -1.41
VPS50-201ENST00000251739 MUC2Q02817 5179 aa6.23□□□□□ -1.41
VPS50-201ENST00000251739 D6R8Y8 96 aa6.23□□□□□ -1.41
VPS50-201ENST00000251739 H0Y9J4 135 aa6.23□□□□□ -1.41
VPS50-201ENST00000251739 NDUFA1O15239 70 aa6.23□□□□□ -1.41
VPS50-201ENST00000251739 SCGB1D1O95968 90 aa6.23□□□□□ -1.41
VPS50-201ENST00000251739 NPYP01303 97 aa6.23□□□□□ -1.41
VPS50-201ENST00000251739 KRTAP1-4P0C5Y4 121 aa6.23□□□□□ -1.41
VPS50-201ENST00000251739 FABP4P15090 132 aa6.23□□□□□ -1.41
VPS50-201ENST00000251739 ADCYAP1P18509 176 aa6.23□□□□□ -1.41
VPS50-201ENST00000251739 KIAA0087Q14695 138 aa6.23□□□□□ -1.41
VPS50-201ENST00000251739 ADIRFQ15847 76 aa6.23□□□□□ -1.41
VPS50-201ENST00000251739 COA6Q5JTJ3 125 aaKnown RBP6.23□□□□□ -1.41
VPS50-201ENST00000251739 UNQ6190/PRO20217Q6UXQ8 127 aa6.23□□□□□ -1.41
VPS50-201ENST00000251739 PRR26Q8N8Z3 221 aa6.23□□□□□ -1.41
VPS50-201ENST00000251739 DIRC1Q969H9 104 aa6.23□□□□□ -1.41
VPS50-201ENST00000251739 A0A087WZ39 114 aa6.22□□□□□ -1.41
VPS50-201ENST00000251739 IFITM10A6NMD0 228 aa6.22□□□□□ -1.41
VPS50-201ENST00000251739 HBBP68871 147 aa6.22□□□□□ -1.41
VPS50-201ENST00000251739 PNRC1Q12796 327 aaPredicted RBP6.21□□□□□ -1.42
VPS50-201ENST00000251739 HIST1H2BLQ99880 126 aa6.21□□□□□ -1.42
VPS50-201ENST00000251739 PYGO1Q9Y3Y4 419 aa6.21□□□□□ -1.42
VPS50-201ENST00000251739 IGLV1-50A0A075B6I6 118 aa6.2□□□□□ -1.42
VPS50-201ENST00000251739 IGLV4-3A0A075B6K6 122 aa6.2□□□□□ -1.42
VPS50-201ENST00000251739 OCIAD2Q56VL3 154 aa6.2□□□□□ -1.42
VPS50-201ENST00000251739 LINC00242Q5T6M2 205 aa6.2□□□□□ -1.42
VPS50-201ENST00000251739 MRPL54Q6P161 138 aaKnown RBP6.2□□□□□ -1.42
VPS50-201ENST00000251739 FAM19A5Q7Z5A7 132 aaPredicted RBP6.2□□□□□ -1.42
VPS50-201ENST00000251739 CTDSP1Q9GZU7 261 aa6.2□□□□□ -1.42
VPS50-201ENST00000251739 TRBV30A0A0K0K1B3 111 aa6.19□□□□□ -1.42
VPS50-201ENST00000251739 HIST1H2BKO60814 126 aa6.19□□□□□ -1.42
VPS50-201ENST00000251739 HIST1H2BJP06899 126 aa6.19□□□□□ -1.42
VPS50-201ENST00000251739 HIST1H2BOP23527 126 aa6.19□□□□□ -1.42
VPS50-201ENST00000251739 HIST1H2BBP33778 126 aa6.19□□□□□ -1.42
VPS50-201ENST00000251739 HIST1H2BDP58876 126 aa6.19□□□□□ -1.42
VPS50-201ENST00000251739 HIST1H2BCP62807 126 aa6.19□□□□□ -1.42
VPS50-201ENST00000251739 HIST2H2BEQ16778 126 aa6.19□□□□□ -1.42
VPS50-201ENST00000251739 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.19□□□□□ -1.42
VPS50-201ENST00000251739 C9orf129Q5T035 196 aaKnown RBP6.19□□□□□ -1.42
VPS50-201ENST00000251739 HIST1H2BHQ93079 126 aa6.19□□□□□ -1.42
VPS50-201ENST00000251739 HIST1H2BNQ99877 126 aa6.19□□□□□ -1.42
VPS50-201ENST00000251739 HIST1H2BMQ99879 126 aa6.19□□□□□ -1.42
VPS50-201ENST00000251739 NDUFC2-KCTD14E9PQ53 114 aa6.18□□□□□ -1.42
VPS50-201ENST00000251739 J3QR89 54 aa6.18□□□□□ -1.42
VPS50-201ENST00000251739 M0QXV9 152 aa6.18□□□□□ -1.42
VPS50-201ENST00000251739 IFI27P40305 119 aaPredicted RBP6.18□□□□□ -1.42
VPS50-201ENST00000251739 GAGE2EQ4V326 116 aa6.18□□□□□ -1.42
VPS50-201ENST00000251739 C2orf82Q6UX34 121 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms