RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 LCE6AA0A183 80 aa7.52□□□□□ -1.21
TNFAIP3-201ENST00000237289 USP17L23D6RBM5 183 aa7.51□□□□□ -1.21
TNFAIP3-201ENST00000237289 LINC01545Q5VT33 79 aa7.51□□□□□ -1.21
TNFAIP3-201ENST00000237289 ZNF815PA8K554 130 aa7.51□□□□□ -1.21
TNFAIP3-201ENST00000237289 CXCL5P42830 114 aa7.51□□□□□ -1.21
TNFAIP3-201ENST00000237289 SPATA12Q7Z6I5 190 aa7.51□□□□□ -1.21
TNFAIP3-201ENST00000237289 NDUFA12Q9UI09 145 aa7.51□□□□□ -1.21
TNFAIP3-201ENST00000237289 TGP01266 2768 aa7.5□□□□□ -1.21
TNFAIP3-201ENST00000237289 ETDBQ3ZM63 59 aa7.5□□□□□ -1.21
TNFAIP3-201ENST00000237289 ZNF22P17026 224 aaPredicted RBP7.5□□□□□ -1.21
TNFAIP3-201ENST00000237289 ANAPC13Q9BS18 74 aa7.5□□□□□ -1.21
TNFAIP3-201ENST00000237289 PRR34Q9NV39 138 aa7.5□□□□□ -1.21
TNFAIP3-201ENST00000237289 TP73-AS1Q9UF72 201 aa7.5□□□□□ -1.21
TNFAIP3-201ENST00000237289 PFN2P35080 140 aa7.49□□□□□ -1.21
TNFAIP3-201ENST00000237289 LYRM7Q5U5X0 104 aa7.49□□□□□ -1.21
TNFAIP3-201ENST00000237289 J3QQQ9 107 aa7.49□□□□□ -1.21
TNFAIP3-201ENST00000237289 SYCNQ0VAF6 134 aa7.49□□□□□ -1.21
TNFAIP3-201ENST00000237289 COPS9Q8WXC6 57 aa7.49□□□□□ -1.21
TNFAIP3-201ENST00000237289 A0A087WZ39 114 aa7.49□□□□□ -1.21
TNFAIP3-201ENST00000237289 COX6A2Q02221 97 aa7.49□□□□□ -1.21
TNFAIP3-201ENST00000237289 LINC00526Q96FQ7 95 aa7.48□□□□□ -1.21
TNFAIP3-201ENST00000237289 LEPROTO15243 131 aa7.48□□□□□ -1.21
TNFAIP3-201ENST00000237289 CARD19Q96LW7 228 aa7.48□□□□□ -1.21
TNFAIP3-201ENST00000237289 MEGF8Q7Z7M0 2845 aa7.48□□□□□ -1.21
TNFAIP3-201ENST00000237289 RPL18AQ02543 176 aaKnown RBP7.48□□□□□ -1.21
TNFAIP3-201ENST00000237289 HSD52Q0P140 79 aa7.47□□□□□ -1.21
TNFAIP3-201ENST00000237289 IGLV5-52A0A0A0MRZ9 124 aa7.46□□□□□ -1.21
TNFAIP3-201ENST00000237289 SNCGO76070 127 aa7.46□□□□□ -1.21
TNFAIP3-201ENST00000237289 IGLV4-69A0A075B6H9 119 aa7.46□□□□□ -1.22
TNFAIP3-201ENST00000237289 IGHV3OR16-9A0A0B4J2B5 98 aa7.46□□□□□ -1.22
TNFAIP3-201ENST00000237289 HERV-K104P63124 156 aa7.46□□□□□ -1.22
TNFAIP3-201ENST00000237289 GAGE2BQ13066 116 aa7.46□□□□□ -1.22
TNFAIP3-201ENST00000237289 BVES-AS1Q5T3Y7 98 aa7.46□□□□□ -1.22
TNFAIP3-201ENST00000237289 TMEM223A0PJW6 202 aa7.45□□□□□ -1.22
TNFAIP3-201ENST00000237289 FOXI1Q12951 378 aa7.45□□□□□ -1.22
TNFAIP3-201ENST00000237289 GAGE2EQ4V326 116 aa7.45□□□□□ -1.22
TNFAIP3-201ENST00000237289 GAGE2DQ9UEU5 116 aa7.45□□□□□ -1.22
TNFAIP3-201ENST00000237289 TMEM238LA0A1B0GVL6 79 aa7.45□□□□□ -1.22
TNFAIP3-201ENST00000237289 A6NJY4 79 aa7.45□□□□□ -1.22
TNFAIP3-201ENST00000237289 LINC00336Q6ZUF6 198 aa7.45□□□□□ -1.22
TNFAIP3-201ENST00000237289 LINC01561Q8N1V8 128 aa7.44□□□□□ -1.22
TNFAIP3-201ENST00000237289 E9PLD3 99 aa7.44□□□□□ -1.22
TNFAIP3-201ENST00000237289 Q8IZM0 81 aa7.44□□□□□ -1.22
TNFAIP3-201ENST00000237289 IGKV2-24A0A0C4DH68 120 aa7.43□□□□□ -1.22
TNFAIP3-201ENST00000237289 K7ERJ3 54 aa7.43□□□□□ -1.22
TNFAIP3-201ENST00000237289 SMIM1B2RUZ4 78 aa7.43□□□□□ -1.22
TNFAIP3-201ENST00000237289 C2orf82Q6UX34 121 aa7.43□□□□□ -1.22
TNFAIP3-201ENST00000237289 H3BMG7 143 aa7.42□□□□□ -1.22
TNFAIP3-201ENST00000237289 C2orf48Q96LS8 159 aa7.42□□□□□ -1.22
TNFAIP3-201ENST00000237289 KRTAP1-5Q9BYS1 174 aa7.42□□□□□ -1.22
TNFAIP3-201ENST00000237289 A0A087WTM6 91 aa7.41□□□□□ -1.22
TNFAIP3-201ENST00000237289 C9orf118A6NHY6 69 aa7.41□□□□□ -1.22
TNFAIP3-201ENST00000237289 F8WDY8 70 aa7.41□□□□□ -1.22
TNFAIP3-201ENST00000237289 NPC2P61916 151 aa7.41□□□□□ -1.22
TNFAIP3-201ENST00000237289 UNQ6190/PRO20217Q6UXQ8 127 aa7.41□□□□□ -1.22
TNFAIP3-201ENST00000237289 OR13C6PQ8NH95 151 aa7.41□□□□□ -1.22
TNFAIP3-201ENST00000237289 ANKRD39Q53RE8 183 aa7.41□□□□□ -1.22
TNFAIP3-201ENST00000237289 NKAPP1Q8N9T2 125 aa7.4□□□□□ -1.22
TNFAIP3-201ENST00000237289 SS18L2Q9UHA2 77 aa7.4□□□□□ -1.22
TNFAIP3-201ENST00000237289 LOC107984640A0A0U1RRK4 108 aa7.4□□□□□ -1.23
TNFAIP3-201ENST00000237289 TAX1BP3O14907 124 aa7.4□□□□□ -1.23
TNFAIP3-201ENST00000237289 TSPAN13O95857 204 aa7.4□□□□□ -1.23
TNFAIP3-201ENST00000237289 ERG28Q9UKR5 140 aa7.39□□□□□ -1.23
TNFAIP3-201ENST00000237289 K7EP34 96 aa7.39□□□□□ -1.23
TNFAIP3-201ENST00000237289 Q6ZR54 194 aa7.39□□□□□ -1.23
TNFAIP3-201ENST00000237289 IGLV5-45A0A087WSX0 123 aa7.38□□□□□ -1.23
TNFAIP3-201ENST00000237289 TRBV30A0A0K0K1B3 111 aa7.38□□□□□ -1.23
TNFAIP3-201ENST00000237289 TTTY13Q9BZ97 58 aa7.38□□□□□ -1.23
TNFAIP3-201ENST00000237289 PGPEP1Q9NXJ5 209 aa7.38□□□□□ -1.23
TNFAIP3-201ENST00000237289 TNP2Q05952 138 aa7.38□□□□□ -1.23
TNFAIP3-201ENST00000237289 NTN5Q8WTR8 489 aaPredicted RBP7.38□□□□□ -1.23
TNFAIP3-201ENST00000237289 GVQW2A0A096LPI5 108 aaPredicted RBP7.38□□□□□ -1.23
TNFAIP3-201ENST00000237289 B5MCH6 92 aa7.38□□□□□ -1.23
TNFAIP3-201ENST00000237289 PCP2Q8IVA1 136 aa7.38□□□□□ -1.23
TNFAIP3-201ENST00000237289 A0A1W2PPM0 123 aa7.37□□□□□ -1.23
TNFAIP3-201ENST00000237289 Q6ZRU5 148 aa7.37□□□□□ -1.23
TNFAIP3-201ENST00000237289 FAM19A3Q7Z5A8 133 aa7.37□□□□□ -1.23
TNFAIP3-201ENST00000237289 RTL8CO15255 209 aa7.37□□□□□ -1.23
TNFAIP3-201ENST00000237289 S100A7L2Q5SY68 101 aa7.37□□□□□ -1.23
TNFAIP3-201ENST00000237289 LINC00474Q9P2X8 69 aa7.37□□□□□ -1.23
TNFAIP3-201ENST00000237289 C16orf90A8MZG2 172 aa7.37□□□□□ -1.23
TNFAIP3-201ENST00000237289 COX8AP10176 69 aa7.37□□□□□ -1.23
TNFAIP3-201ENST00000237289 Q8N814 137 aa7.37□□□□□ -1.23
TNFAIP3-201ENST00000237289 BOD1L2Q8IYS8 172 aa7.36□□□□□ -1.23
TNFAIP3-201ENST00000237289 UBE2BP63146 152 aa7.36□□□□□ -1.23
TNFAIP3-201ENST00000237289 COX6CP09669 75 aa7.36□□□□□ -1.23
TNFAIP3-201ENST00000237289 MIR7-3HGQ8N6C7 128 aa7.36□□□□□ -1.23
TNFAIP3-201ENST00000237289 TRBV20-1A0A075B6N2 111 aa7.35□□□□□ -1.23
TNFAIP3-201ENST00000237289 WFDC2Q14508 124 aa7.35□□□□□ -1.23
TNFAIP3-201ENST00000237289 XAGE1AQ9HD64 81 aa7.35□□□□□ -1.23
TNFAIP3-201ENST00000237289 IGLV5-39A0A0G2JS06 123 aa7.35□□□□□ -1.23
TNFAIP3-201ENST00000237289 C15orf56Q8N910 161 aa7.35□□□□□ -1.23
TNFAIP3-201ENST00000237289 C9orf116Q5BN46 136 aaPredicted RBP7.34□□□□□ -1.23
TNFAIP3-201ENST00000237289 SCGB1A1P11684 91 aa7.34□□□□□ -1.23
TNFAIP3-201ENST00000237289 DAND5Q8N907 189 aa7.34□□□□□ -1.23
TNFAIP3-201ENST00000237289 FAM104AQ969W3 186 aa7.34□□□□□ -1.23
TNFAIP3-201ENST00000237289 CMYA5Q8N3K9 4069 aa7.34□□□□□ -1.23
TNFAIP3-201ENST00000237289 A0A0J9YXY3 114 aa7.34□□□□□ -1.24
TNFAIP3-201ENST00000237289 COX17Q14061 63 aa7.34□□□□□ -1.24
TNFAIP3-201ENST00000237289 SMIM20Q8N5G0 67 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms