RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 NREPQ16612 68 aa9.85□□□□□ -0.83
NFKB1-201ENST00000226574 UBE2BP63146 152 aa9.85□□□□□ -0.83
NFKB1-201ENST00000226574 Q6ZQY7 126 aa9.85□□□□□ -0.83
NFKB1-201ENST00000226574 FLNCQ14315 2725 aa9.85□□□□□ -0.83
NFKB1-201ENST00000226574 A8MTW9 85 aa9.85□□□□□ -0.83
NFKB1-201ENST00000226574 UBE2DNLQ8IWF7 75 aa9.84□□□□□ -0.83
NFKB1-201ENST00000226574 DIRC1Q969H9 104 aa9.84□□□□□ -0.83
NFKB1-201ENST00000226574 FAM110AQ9BQ89 295 aa9.84□□□□□ -0.83
NFKB1-201ENST00000226574 EIF4EBP3O60516 100 aaPredicted RBP9.83□□□□□ -0.84
NFKB1-201ENST00000226574 J3QKU1 62 aa9.83□□□□□ -0.84
NFKB1-201ENST00000226574 SMR3AQ99954 134 aa9.82□□□□□ -0.84
NFKB1-201ENST00000226574 FHL3Q13643 280 aa9.82□□□□□ -0.84
NFKB1-201ENST00000226574 SNURFQ9Y675 71 aa9.82□□□□□ -0.84
NFKB1-201ENST00000226574 C9orf66Q5T8R8 295 aa9.82□□□□□ -0.84
NFKB1-201ENST00000226574 LINC00337Q8N6G1 96 aa9.82□□□□□ -0.84
NFKB1-201ENST00000226574 ETDCA0A1B0GVM5 59 aa9.81□□□□□ -0.84
NFKB1-201ENST00000226574 TEP1Q99973 2627 aaKnown RBP9.81□□□□□ -0.84
NFKB1-201ENST00000226574 UNQ6190/PRO20217Q6UXQ8 127 aa9.8□□□□□ -0.84
NFKB1-201ENST00000226574 LRRC75A-AS1Q8N1F1 130 aa9.8□□□□□ -0.84
NFKB1-201ENST00000226574 NTM-AS1Q6ZSK4 140 aa9.8□□□□□ -0.84
NFKB1-201ENST00000226574 FAM19A4Q96LR4 140 aa9.79□□□□□ -0.84
NFKB1-201ENST00000226574 SOSTDC1Q6X4U4 206 aa9.79□□□□□ -0.84
NFKB1-201ENST00000226574 LOC107984640A0A0U1RRK4 108 aa9.78□□□□□ -0.84
NFKB1-201ENST00000226574 C3orf84H3BNL1 204 aa9.78□□□□□ -0.84
NFKB1-201ENST00000226574 COX7CP15954 63 aa9.78□□□□□ -0.84
NFKB1-201ENST00000226574 COX7BP24311 80 aa9.78□□□□□ -0.84
NFKB1-201ENST00000226574 A0A096LNI7 61 aa9.78□□□□□ -0.84
NFKB1-201ENST00000226574 DMDP11532 3685 aa9.78□□□□□ -0.84
NFKB1-201ENST00000226574 IGKV2-28A0A075B6P5 120 aa9.77□□□□□ -0.84
NFKB1-201ENST00000226574 IGKV2D-28P01615 120 aa9.77□□□□□ -0.84
NFKB1-201ENST00000226574 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.77□□□□□ -0.85
NFKB1-201ENST00000226574 FUSP35637 526 aaKnown RBP eCLIP9.77□□□□□ -0.85
NFKB1-201ENST00000226574 LINC00846Q9NV44 126 aa9.77□□□□□ -0.85
NFKB1-201ENST00000226574 FAM218AQ96MZ4 157 aa9.76□□□□□ -0.85
NFKB1-201ENST00000226574 SERP2Q8N6R1 65 aa9.76□□□□□ -0.85
NFKB1-201ENST00000226574 TEX15Q9BXT5 2789 aa9.76□□□□□ -0.85
NFKB1-201ENST00000226574 ZNF575Q86XF7 245 aa9.76□□□□□ -0.85
NFKB1-201ENST00000226574 IMUPQ9GZP8 106 aa9.76□□□□□ -0.85
NFKB1-201ENST00000226574 UBR5O95071 2799 aaPredicted RBP9.75□□□□□ -0.85
NFKB1-201ENST00000226574 IGKV2-24A0A0C4DH68 120 aa9.75□□□□□ -0.85
NFKB1-201ENST00000226574 INAFM1C9JVW0 142 aa9.75□□□□□ -0.85
NFKB1-201ENST00000226574 C11orf72Q8NBR9 251 aa9.75□□□□□ -0.85
NFKB1-201ENST00000226574 LAMA5O15230 3695 aa9.75□□□□□ -0.85
NFKB1-201ENST00000226574 FAM240AA0A1B0GVK7 77 aa9.75□□□□□ -0.85
NFKB1-201ENST00000226574 RPL28P46779 137 aaKnown RBP9.75□□□□□ -0.85
NFKB1-201ENST00000226574 Q6Q795 121 aa9.75□□□□□ -0.85
NFKB1-201ENST00000226574 CD164L2Q6UWJ8 174 aa9.75□□□□□ -0.85
NFKB1-201ENST00000226574 FAM19A1Q7Z5A9 133 aa9.75□□□□□ -0.85
NFKB1-201ENST00000226574 MPLKIPQ8TAP9 179 aa9.75□□□□□ -0.85
NFKB1-201ENST00000226574 UNC79Q9P2D8 2635 aa9.74□□□□□ -0.85
NFKB1-201ENST00000226574 CYSRT1A8MQ03 144 aa9.74□□□□□ -0.85
NFKB1-201ENST00000226574 C6orf223Q8N319 242 aa9.74□□□□□ -0.85
NFKB1-201ENST00000226574 HILS1P60008 231 aa9.74□□□□□ -0.85
NFKB1-201ENST00000226574 CCKP06307 115 aa9.73□□□□□ -0.85
NFKB1-201ENST00000226574 BEAN1Q3B7T3 259 aa9.73□□□□□ -0.85
NFKB1-201ENST00000226574 M0QXV9 152 aa9.73□□□□□ -0.85
NFKB1-201ENST00000226574 ZNF843Q8N446 348 aa9.73□□□□□ -0.85
NFKB1-201ENST00000226574 ZFHX4Q86UP3 3567 aa9.73□□□□□ -0.85
NFKB1-201ENST00000226574 A0A087WZ39 114 aa9.73□□□□□ -0.85
NFKB1-201ENST00000226574 NBEAL1Q6ZS30 2694 aa9.72□□□□□ -0.85
NFKB1-201ENST00000226574 FHL2Q14192 279 aa9.72□□□□□ -0.85
NFKB1-201ENST00000226574 BPY2O14599 106 aa9.72□□□□□ -0.85
NFKB1-201ENST00000226574 HELZ2Q9BYK8 2649 aaKnown RBP9.72□□□□□ -0.85
NFKB1-201ENST00000226574 NOTCH1P46531 2555 aa9.72□□□□□ -0.85
NFKB1-201ENST00000226574 PRR4Q16378 134 aa9.71□□□□□ -0.86
NFKB1-201ENST00000226574 HIGD2AQ9BW72 106 aa9.7□□□□□ -0.86
NFKB1-201ENST00000226574 PPDPFQ9H3Y8 114 aa9.7□□□□□ -0.86
NFKB1-201ENST00000226574 BRI3O95415 125 aa9.7□□□□□ -0.86
NFKB1-201ENST00000226574 SHISA2Q6UWI4 295 aa9.7□□□□□ -0.86
NFKB1-201ENST00000226574 BRK1Q8WUW1 75 aa9.69□□□□□ -0.86
NFKB1-201ENST00000226574 IGLV5-39A0A0G2JS06 123 aa9.68□□□□□ -0.86
NFKB1-201ENST00000226574 FAM236DA0A1B0GTK5 79 aa9.68□□□□□ -0.86
NFKB1-201ENST00000226574 FAM236CP0DP71 79 aa9.68□□□□□ -0.86
NFKB1-201ENST00000226574 Q8N814 137 aa9.68□□□□□ -0.86
NFKB1-201ENST00000226574 ZANQ9Y493 2812 aa9.68□□□□□ -0.86
NFKB1-201ENST00000226574 Q8IZM0 81 aa9.68□□□□□ -0.86
NFKB1-201ENST00000226574 LITAFQ99732 161 aa9.68□□□□□ -0.86
NFKB1-201ENST00000226574 RPL37AP8A6NKH3 93 aa9.68□□□□□ -0.86
NFKB1-201ENST00000226574 LYRM9A8MSI8 78 aa9.68□□□□□ -0.86
NFKB1-201ENST00000226574 CSDC2Q9Y534 153 aaKnown RBP9.68□□□□□ -0.86
NFKB1-201ENST00000226574 SBSPONQ8IVN8 264 aa9.67□□□□□ -0.86
NFKB1-201ENST00000226574 Q8N3U1 123 aa9.67□□□□□ -0.86
NFKB1-201ENST00000226574 TRBV10-3A0A0K0K1G6 114 aa9.67□□□□□ -0.86
NFKB1-201ENST00000226574 IGHV3OR16-9A0A0B4J2B5 98 aa9.67□□□□□ -0.86
NFKB1-201ENST00000226574 A0A0U1RQV1 116 aa9.67□□□□□ -0.86
NFKB1-201ENST00000226574 IGLV1-51P01701 117 aa9.67□□□□□ -0.86
NFKB1-201ENST00000226574 OXLD1Q5BKU9 147 aa9.67□□□□□ -0.86
NFKB1-201ENST00000226574 HRCT1Q6UXD1 115 aa9.67□□□□□ -0.86
NFKB1-201ENST00000226574 TMEM258P61165 79 aa9.66□□□□□ -0.86
NFKB1-201ENST00000226574 TNRC18O15417 2968 aaPredicted RBP9.66□□□□□ -0.86
NFKB1-201ENST00000226574 C5orf47Q569G3 176 aa9.66□□□□□ -0.86
NFKB1-201ENST00000226574 CELA1Q9UNI1 258 aa9.65□□□□□ -0.86
NFKB1-201ENST00000226574 PKIGQ9Y2B9 76 aa9.65□□□□□ -0.86
NFKB1-201ENST00000226574 CDK2AP2O75956 126 aa9.65□□□□□ -0.87
NFKB1-201ENST00000226574 RELNP78509 3460 aa9.64□□□□□ -0.87
NFKB1-201ENST00000226574 LRCOL1A6NCL2 159 aa9.64□□□□□ -0.87
NFKB1-201ENST00000226574 SMIM9A6NGZ8 99 aa9.64□□□□□ -0.87
NFKB1-201ENST00000226574 NDUFS5O43920 106 aa9.64□□□□□ -0.87
NFKB1-201ENST00000226574 Q6JHZ5 121 aa9.64□□□□□ -0.87
NFKB1-201ENST00000226574 KPRPQ5T749 579 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms