RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 IGKV2D-28P01615 120 aa10.18□□□□□ -0.78
CNOT3-201ENST00000221232 GAGE2BQ13066 116 aa10.18□□□□□ -0.78
CNOT3-201ENST00000221232 GAGE2EQ4V326 116 aa10.18□□□□□ -0.78
CNOT3-201ENST00000221232 COPS9Q8WXC6 57 aa10.18□□□□□ -0.78
CNOT3-201ENST00000221232 GAGE2DQ9UEU5 116 aa10.18□□□□□ -0.78
CNOT3-201ENST00000221232 X6R8D5 127 aa10.18□□□□□ -0.78
CNOT3-201ENST00000221232 PAX4O43316 350 aa10.17□□□□□ -0.78
CNOT3-201ENST00000221232 CRPP02741 224 aa10.17□□□□□ -0.78
CNOT3-201ENST00000221232 BAALC-AS2P0C853 105 aa10.17□□□□□ -0.78
CNOT3-201ENST00000221232 ATP5G1P05496 136 aa10.17□□□□□ -0.78
CNOT3-201ENST00000221232 HTN3P15516 51 aa10.17□□□□□ -0.78
CNOT3-201ENST00000221232 CCL18P55774 89 aa10.17□□□□□ -0.78
CNOT3-201ENST00000221232 A0A087WZ39 114 aa10.15□□□□□ -0.78
CNOT3-201ENST00000221232 PRR3P79522 188 aaKnown RBP10.15□□□□□ -0.79
CNOT3-201ENST00000221232 LINC00269Q8N2A0 174 aa10.14□□□□□ -0.79
CNOT3-201ENST00000221232 SMIM11BQ8TCY0 68 aa10.14□□□□□ -0.79
CNOT3-201ENST00000221232 KIR2DL5BQ8NHK3 375 aa10.14□□□□□ -0.79
CNOT3-201ENST00000221232 PRO0255Q9UI72 69 aa10.14□□□□□ -0.79
CNOT3-201ENST00000221232 TRAV13-2A0A0B4J235 113 aa10.13□□□□□ -0.79
CNOT3-201ENST00000221232 SS18Q15532 418 aa10.13□□□□□ -0.79
CNOT3-201ENST00000221232 A0A087WYN8 130 aa10.12□□□□□ -0.79
CNOT3-201ENST00000221232 LINC01600Q96MT4 127 aa10.12□□□□□ -0.79
CNOT3-201ENST00000221232 ANGP03950 147 aaKnown RBP10.11□□□□□ -0.79
CNOT3-201ENST00000221232 SLPIP03973 132 aa10.11□□□□□ -0.79
CNOT3-201ENST00000221232 C9orf116Q5BN46 136 aaPredicted RBP10.11□□□□□ -0.79
CNOT3-201ENST00000221232 LOC107984640A0A0U1RRK4 108 aa10.1□□□□□ -0.79
CNOT3-201ENST00000221232 LINC00526Q96FQ7 95 aa10.1□□□□□ -0.79
CNOT3-201ENST00000221232 CELA1Q9UNI1 258 aa10.1□□□□□ -0.79
CNOT3-201ENST00000221232 IGHV4-28A0A0C4DH34 117 aa10.1□□□□□ -0.79
CNOT3-201ENST00000221232 MRPL23Q16540 153 aaKnown RBP10.1□□□□□ -0.79
CNOT3-201ENST00000221232 IBA57-AS1B1ANH7 110 aa10.09□□□□□ -0.79
CNOT3-201ENST00000221232 RPL28P46779 137 aaKnown RBP10.09□□□□□ -0.79
CNOT3-201ENST00000221232 C9orf129Q5T035 196 aaKnown RBP10.09□□□□□ -0.79
CNOT3-201ENST00000221232 C22orf24Q9Y442 160 aa10.09□□□□□ -0.79
CNOT3-201ENST00000221232 DAD1P61803 113 aa10.08□□□□□ -0.8
CNOT3-201ENST00000221232 TRACP01848 142 aa10.08□□□□□ -0.8
CNOT3-201ENST00000221232 NDUFV3P56181 108 aaKnown RBP10.08□□□□□ -0.8
CNOT3-201ENST00000221232 LINC00612Q8N6U2 182 aa10.08□□□□□ -0.8
CNOT3-201ENST00000221232 DNAL4O96015 105 aa10.08□□□□□ -0.8
CNOT3-201ENST00000221232 LECT2O14960 151 aa10.07□□□□□ -0.8
CNOT3-201ENST00000221232 C9orf66Q5T8R8 295 aa10.07□□□□□ -0.8
CNOT3-201ENST00000221232 GAGE2AQ6NT46 116 aa10.07□□□□□ -0.8
CNOT3-201ENST00000221232 MALP21145 153 aa10.06□□□□□ -0.8
CNOT3-201ENST00000221232 DEFB121Q5J5C9 76 aa10.06□□□□□ -0.8
CNOT3-201ENST00000221232 CHCHD10Q8WYQ3 142 aaPredicted RBP10.06□□□□□ -0.8
CNOT3-201ENST00000221232 HIVEP1P15822 2718 aa10.06□□□□□ -0.8
CNOT3-201ENST00000221232 NSD1Q96L73 2696 aaPredicted RBP10.06□□□□□ -0.8
CNOT3-201ENST00000221232 SMCR5Q8TEV8 140 aa10.05□□□□□ -0.8
CNOT3-201ENST00000221232 A0A1B0GUV1 79 aa10.05□□□□□ -0.8
CNOT3-201ENST00000221232 REG3AQ06141 175 aa10.05□□□□□ -0.8
CNOT3-201ENST00000221232 SMIM9A6NGZ8 99 aa10.04□□□□□ -0.8
CNOT3-201ENST00000221232 TEP1Q99973 2627 aaKnown RBP10.04□□□□□ -0.8
CNOT3-201ENST00000221232 C6orf223Q8N319 242 aa10.04□□□□□ -0.8
CNOT3-201ENST00000221232 C14orf132Q9NPU4 83 aa10.04□□□□□ -0.8
CNOT3-201ENST00000221232 KMT2BQ9UMN6 2715 aaPredicted RBP10.03□□□□□ -0.8
CNOT3-201ENST00000221232 LYRM9A8MSI8 78 aa10.02□□□□□ -0.8
CNOT3-201ENST00000221232 Q8IZM0 81 aa10.02□□□□□ -0.8
CNOT3-201ENST00000221232 NCR3O14931 201 aa10.01□□□□□ -0.81
CNOT3-201ENST00000221232 APOC4P55056 127 aa10.01□□□□□ -0.81
CNOT3-201ENST00000221232 CD164L2Q6UWJ8 174 aa10.01□□□□□ -0.81
CNOT3-201ENST00000221232 KLK12Q9UKR0 248 aa10.01□□□□□ -0.81
CNOT3-201ENST00000221232 FAM240AA0A1B0GVK7 77 aa10□□□□□ -0.81
CNOT3-201ENST00000221232 KIAA0087Q14695 138 aa10□□□□□ -0.81
CNOT3-201ENST00000221232 C10orf25Q5T742 122 aa10□□□□□ -0.81
CNOT3-201ENST00000221232 UNQ6190/PRO20217Q6UXQ8 127 aa9.99□□□□□ -0.81
CNOT3-201ENST00000221232 Q8NAQ8 132 aa9.99□□□□□ -0.81
CNOT3-201ENST00000221232 IGHV4-30-4P0DP06 118 aa9.99□□□□□ -0.81
CNOT3-201ENST00000221232 KLK5Q9Y337 293 aaPredicted RBP9.99□□□□□ -0.81
CNOT3-201ENST00000221232 H0YGX0 51 aa9.98□□□□□ -0.81
CNOT3-201ENST00000221232 Q8NDZ9 215 aa9.98□□□□□ -0.81
CNOT3-201ENST00000221232 RETNQ9HD89 108 aa9.97□□□□□ -0.81
CNOT3-201ENST00000221232 SPART-AS1P0CW21 52 aa9.97□□□□□ -0.81
CNOT3-201ENST00000221232 FAM236AA0A1B0GUQ0 79 aa9.96□□□□□ -0.81
CNOT3-201ENST00000221232 FAM236BA0A1B0GV22 79 aa9.96□□□□□ -0.81
CNOT3-201ENST00000221232 OXLD1Q5BKU9 147 aa9.96□□□□□ -0.81
CNOT3-201ENST00000221232 Q6Q795 121 aa9.96□□□□□ -0.81
CNOT3-201ENST00000221232 PKD1L1Q8TDX9 2849 aa9.96□□□□□ -0.82
CNOT3-201ENST00000221232 NANOS2P60321 138 aaKnown RBP9.96□□□□□ -0.82
CNOT3-201ENST00000221232 C5orf47Q569G3 176 aa9.96□□□□□ -0.82
CNOT3-201ENST00000221232 ACYP1P07311 99 aa9.95□□□□□ -0.82
CNOT3-201ENST00000221232 INAFM2P0DMQ5 153 aa9.95□□□□□ -0.82
CNOT3-201ENST00000221232 SPAG11BQ08648 103 aa9.94□□□□□ -0.82
CNOT3-201ENST00000221232 IGKV3D-7A0A0C4DH55 119 aa9.93□□□□□ -0.82
CNOT3-201ENST00000221232 CYSRT1A8MQ03 144 aa9.93□□□□□ -0.82
CNOT3-201ENST00000221232 MIFP14174 115 aa9.93□□□□□ -0.82
CNOT3-201ENST00000221232 C6orf99Q4VX62 202 aa9.93□□□□□ -0.82
CNOT3-201ENST00000221232 LINC00643Q86TS7 51 aa9.93□□□□□ -0.82
CNOT3-201ENST00000221232 S100A7L2Q5SY68 101 aa9.93□□□□□ -0.82
CNOT3-201ENST00000221232 SDIM1Q6ZPB5 146 aa9.92□□□□□ -0.82
CNOT3-201ENST00000221232 ORMDL1Q9P0S3 153 aa9.92□□□□□ -0.82
CNOT3-201ENST00000221232 XAGE1AQ9HD64 81 aa9.92□□□□□ -0.82
CNOT3-201ENST00000221232 TRBV7-7A0A0K0K1E9 115 aa9.91□□□□□ -0.82
CNOT3-201ENST00000221232 LINC00846Q9NV44 126 aa9.91□□□□□ -0.82
CNOT3-201ENST00000221232 RPL18AQ02543 176 aaKnown RBP9.9□□□□□ -0.82
CNOT3-201ENST00000221232 LELP1Q5T871 98 aa9.9□□□□□ -0.82
CNOT3-201ENST00000221232 ENHOQ6UWT2 76 aa9.9□□□□□ -0.82
CNOT3-201ENST00000221232 TMEM126AQ9H061 195 aa9.9□□□□□ -0.82
CNOT3-201ENST00000221232 FLNBO75369 2602 aaKnown RBP9.9□□□□□ -0.83
CNOT3-201ENST00000221232 CXCL5P42830 114 aa9.89□□□□□ -0.83
CNOT3-201ENST00000221232 HIGD2BQ4VC39 106 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms