RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 CCDC179H3BU77 68 aa5.78□□□□□ -1.48
CDC27-201ENST00000066544 DNAL4O96015 105 aa5.78□□□□□ -1.48
CDC27-201ENST00000066544 KRTAP10-3P60369 221 aa5.78□□□□□ -1.48
CDC27-201ENST00000066544 SMIM11BQ8TCY0 68 aa5.78□□□□□ -1.48
CDC27-201ENST00000066544 OVOL2Q9BRP0 275 aa5.78□□□□□ -1.48
CDC27-201ENST00000066544 NSD1Q96L73 2696 aaPredicted RBP5.78□□□□□ -1.48
CDC27-201ENST00000066544 FAM222AQ5U5X8 452 aa5.78□□□□□ -1.48
CDC27-201ENST00000066544 A0A087WYN8 130 aa5.78□□□□□ -1.48
CDC27-201ENST00000066544 TRAV13-2A0A0B4J235 113 aa5.77□□□□□ -1.49
CDC27-201ENST00000066544 LECT2O14960 151 aa5.77□□□□□ -1.49
CDC27-201ENST00000066544 LINC00526Q96FQ7 95 aa5.77□□□□□ -1.49
CDC27-201ENST00000066544 HILS1P60008 231 aa5.77□□□□□ -1.49
CDC27-201ENST00000066544 C9orf129Q5T035 196 aaKnown RBP5.77□□□□□ -1.49
CDC27-201ENST00000066544 FAM19A3Q7Z5A8 133 aa5.77□□□□□ -1.49
CDC27-201ENST00000066544 LINC00269Q8N2A0 174 aa5.76□□□□□ -1.49
CDC27-201ENST00000066544 A0A087WZ39 114 aa5.76□□□□□ -1.49
CDC27-201ENST00000066544 C9orf116Q5BN46 136 aaPredicted RBP5.76□□□□□ -1.49
CDC27-201ENST00000066544 ANGP03950 147 aaKnown RBP5.76□□□□□ -1.49
CDC27-201ENST00000066544 C16orf95Q9H693 158 aa5.76□□□□□ -1.49
CDC27-201ENST00000066544 HIVEP1P15822 2718 aa5.75□□□□□ -1.49
CDC27-201ENST00000066544 SS18Q15532 418 aa5.75□□□□□ -1.49
CDC27-201ENST00000066544 C14orf132Q9NPU4 83 aa5.75□□□□□ -1.49
CDC27-201ENST00000066544 TRACP01848 142 aa5.75□□□□□ -1.49
CDC27-201ENST00000066544 SMCR5Q8TEV8 140 aa5.75□□□□□ -1.49
CDC27-201ENST00000066544 MALP21145 153 aa5.75□□□□□ -1.49
CDC27-201ENST00000066544 PRO0255Q9UI72 69 aa5.75□□□□□ -1.49
CDC27-201ENST00000066544 X6R8D5 127 aa5.75□□□□□ -1.49
CDC27-201ENST00000066544 NOTCH1P46531 2555 aa5.74□□□□□ -1.49
CDC27-201ENST00000066544 FAM236AA0A1B0GUQ0 79 aa5.74□□□□□ -1.49
CDC27-201ENST00000066544 FAM236BA0A1B0GV22 79 aa5.74□□□□□ -1.49
CDC27-201ENST00000066544 RPL28P46779 137 aaKnown RBP5.74□□□□□ -1.49
CDC27-201ENST00000066544 C22orf24Q9Y442 160 aa5.74□□□□□ -1.49
CDC27-201ENST00000066544 F8P00451 2351 aa5.74□□□□□ -1.49
CDC27-201ENST00000066544 LINC01600Q96MT4 127 aa5.74□□□□□ -1.49
CDC27-201ENST00000066544 ANK3Q12955 4377 aaKnown RBP5.74□□□□□ -1.49
CDC27-201ENST00000066544 IBA57-AS1B1ANH7 110 aa5.74□□□□□ -1.49
CDC27-201ENST00000066544 NCR3O14931 201 aa5.73□□□□□ -1.49
CDC27-201ENST00000066544 STAB1Q9NY15 2570 aa5.73□□□□□ -1.49
CDC27-201ENST00000066544 PKD1L1Q8TDX9 2849 aa5.73□□□□□ -1.49
CDC27-201ENST00000066544 INAFM1C9JVW0 142 aa5.73□□□□□ -1.49
CDC27-201ENST00000066544 J3QKU1 62 aa5.73□□□□□ -1.49
CDC27-201ENST00000066544 FAM110AQ9BQ89 295 aa5.73□□□□□ -1.49
CDC27-201ENST00000066544 DEFB121Q5J5C9 76 aa5.72□□□□□ -1.49
CDC27-201ENST00000066544 CFAP161Q6P656 301 aa5.72□□□□□ -1.49
CDC27-201ENST00000066544 LY6G6DO95868 133 aa5.72□□□□□ -1.49
CDC27-201ENST00000066544 DAD1P61803 113 aa5.72□□□□□ -1.49
CDC27-201ENST00000066544 FAM240AA0A1B0GVK7 77 aa5.72□□□□□ -1.49
CDC27-201ENST00000066544 KIR2DL5BQ8NHK3 375 aa5.72□□□□□ -1.49
CDC27-201ENST00000066544 IGKV3D-7A0A0C4DH55 119 aa5.72□□□□□ -1.49
CDC27-201ENST00000066544 CHCHD10Q8WYQ3 142 aaPredicted RBP5.72□□□□□ -1.49
CDC27-201ENST00000066544 TRRAPQ9Y4A5 3859 aa5.72□□□□□ -1.49
CDC27-201ENST00000066544 CELA1Q9UNI1 258 aa5.72□□□□□ -1.49
CDC27-201ENST00000066544 MAST4O15021 2626 aa5.71□□□□□ -1.49
CDC27-201ENST00000066544 IGHV4-28A0A0C4DH34 117 aa5.71□□□□□ -1.5
CDC27-201ENST00000066544 C6orf223Q8N319 242 aa5.71□□□□□ -1.5
CDC27-201ENST00000066544 INAFM2P0DMQ5 153 aa5.7□□□□□ -1.5
CDC27-201ENST00000066544 REG3AQ06141 175 aa5.7□□□□□ -1.5
CDC27-201ENST00000066544 Q6Q795 121 aa5.7□□□□□ -1.5
CDC27-201ENST00000066544 SDIM1Q6ZPB5 146 aa5.7□□□□□ -1.5
CDC27-201ENST00000066544 KLK12Q9UKR0 248 aa5.7□□□□□ -1.5
CDC27-201ENST00000066544 H0YGX0 51 aa5.69□□□□□ -1.5
CDC27-201ENST00000066544 LINC00643Q86TS7 51 aa5.69□□□□□ -1.5
CDC27-201ENST00000066544 UNQ6190/PRO20217Q6UXQ8 127 aa5.69□□□□□ -1.5
CDC27-201ENST00000066544 ACYP1P07311 99 aa5.69□□□□□ -1.5
CDC27-201ENST00000066544 C10orf25Q5T742 122 aa5.69□□□□□ -1.5
CDC27-201ENST00000066544 Q8IZM0 81 aa5.69□□□□□ -1.5
CDC27-201ENST00000066544 MRPL23Q16540 153 aaKnown RBP5.68□□□□□ -1.5
CDC27-201ENST00000066544 A0A1B0GUV1 79 aa5.68□□□□□ -1.5
CDC27-201ENST00000066544 TRBV7-7A0A0K0K1E9 115 aa5.68□□□□□ -1.5
CDC27-201ENST00000066544 CD164L2Q6UWJ8 174 aa5.68□□□□□ -1.5
CDC27-201ENST00000066544 Q8NDZ9 215 aa5.68□□□□□ -1.5
CDC27-201ENST00000066544 TENM3Q9P273 2699 aa5.67□□□□□ -1.5
CDC27-201ENST00000066544 C6orf99Q4VX62 202 aa5.67□□□□□ -1.5
CDC27-201ENST00000066544 S100A7L2Q5SY68 101 aa5.67□□□□□ -1.5
CDC27-201ENST00000066544 LINC00612Q8N6U2 182 aa5.67□□□□□ -1.5
CDC27-201ENST00000066544 LINC00846Q9NV44 126 aa5.67□□□□□ -1.5
CDC27-201ENST00000066544 A0A087WVE0 104 aa5.67□□□□□ -1.5
CDC27-201ENST00000066544 KIAA0087Q14695 138 aa5.67□□□□□ -1.5
CDC27-201ENST00000066544 C9orf66Q5T8R8 295 aa5.67□□□□□ -1.5
CDC27-201ENST00000066544 SPAG11BQ08648 103 aa5.67□□□□□ -1.5
CDC27-201ENST00000066544 XAGE1AQ9HD64 81 aa5.67□□□□□ -1.5
CDC27-201ENST00000066544 ORMDL1Q9P0S3 153 aa5.67□□□□□ -1.5
CDC27-201ENST00000066544 RPL18AQ02543 176 aaKnown RBP5.66□□□□□ -1.5
CDC27-201ENST00000066544 SMIM9A6NGZ8 99 aa5.66□□□□□ -1.5
CDC27-201ENST00000066544 LYRM9A8MSI8 78 aa5.66□□□□□ -1.5
CDC27-201ENST00000066544 CXCL5P42830 114 aa5.66□□□□□ -1.5
CDC27-201ENST00000066544 NANOS2P60321 138 aaKnown RBP5.66□□□□□ -1.5
CDC27-201ENST00000066544 SMIM20Q8N5G0 67 aa5.66□□□□□ -1.5
CDC27-201ENST00000066544 RETNQ9HD89 108 aa5.65□□□□□ -1.5
CDC27-201ENST00000066544 NBEAL1Q6ZS30 2694 aa5.65□□□□□ -1.5
CDC27-201ENST00000066544 APOC4P55056 127 aa5.65□□□□□ -1.51
CDC27-201ENST00000066544 HIST1H4AP62805 103 aaKnown RBP5.65□□□□□ -1.51
CDC27-201ENST00000066544 WFDC9Q8NEX5 89 aa5.65□□□□□ -1.51
CDC27-201ENST00000066544 CYSRT1A8MQ03 144 aa5.64□□□□□ -1.51
CDC27-201ENST00000066544 SPART-AS1P0CW21 52 aa5.64□□□□□ -1.51
CDC27-201ENST00000066544 HIGD2BQ4VC39 106 aa5.64□□□□□ -1.51
CDC27-201ENST00000066544 TMEM126AQ9H061 195 aa5.64□□□□□ -1.51
CDC27-201ENST00000066544 C9orf153Q5TBE3 101 aa5.64□□□□□ -1.51
CDC27-201ENST00000066544 KLK5Q9Y337 293 aaPredicted RBP5.64□□□□□ -1.51
CDC27-201ENST00000066544 IGHV4-30-4P0DP06 118 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 286.1 ms