RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 CDKN2A-AS1Q9UH64 79 aa11.88□□□□□ -0.51
TRAPPC6A-201ENST00000006275 PMCHL1Q16048 86 aa11.87□□□□□ -0.51
TRAPPC6A-201ENST00000006275 C10orf25Q5T742 122 aa11.87□□□□□ -0.51
TRAPPC6A-201ENST00000006275 PACRGQ96M98 296 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC6A-201ENST00000006275 TOMM7Q9P0U1 55 aa11.87□□□□□ -0.51
TRAPPC6A-201ENST00000006275 TINCRA0A1B0GVN0 87 aa11.86□□□□□ -0.51
TRAPPC6A-201ENST00000006275 PRSS2P07478 247 aa11.86□□□□□ -0.51
TRAPPC6A-201ENST00000006275 LINC00469Q8N7U9 141 aa11.86□□□□□ -0.51
TRAPPC6A-201ENST00000006275 ODF1Q14990 250 aa11.85□□□□□ -0.51
TRAPPC6A-201ENST00000006275 C6orf48Q9UBA6 75 aa11.85□□□□□ -0.51
TRAPPC6A-201ENST00000006275 TRGC2P03986 189 aa11.84□□□□□ -0.51
TRAPPC6A-201ENST00000006275 NDUFA6P56556 154 aa11.84□□□□□ -0.51
TRAPPC6A-201ENST00000006275 C6orf226Q5I0X4 101 aa11.84□□□□□ -0.51
TRAPPC6A-201ENST00000006275 C2orf82Q6UX34 121 aa11.84□□□□□ -0.51
TRAPPC6A-201ENST00000006275 C7orf33Q8WU49 177 aa11.84□□□□□ -0.51
TRAPPC6A-201ENST00000006275 PDZD11Q5EBL8 140 aa11.83□□□□□ -0.52
TRAPPC6A-201ENST00000006275 Q8IZM0 81 aa11.83□□□□□ -0.52
TRAPPC6A-201ENST00000006275 CHCHD1Q96BP2 118 aaKnown RBP11.83□□□□□ -0.52
TRAPPC6A-201ENST00000006275 LINC01600Q96MT4 127 aa11.83□□□□□ -0.52
TRAPPC6A-201ENST00000006275 TRBV30A0A0K0K1B3 111 aa11.82□□□□□ -0.52
TRAPPC6A-201ENST00000006275 ATP5LO75964 103 aa11.82□□□□□ -0.52
TRAPPC6A-201ENST00000006275 IGLV5-45A0A087WSX0 123 aa11.81□□□□□ -0.52
TRAPPC6A-201ENST00000006275 TLX1NBP0CAT3 122 aa11.81□□□□□ -0.52
TRAPPC6A-201ENST00000006275 CKS1BP61024 79 aa11.81□□□□□ -0.52
TRAPPC6A-201ENST00000006275 BAGE3Q86Y29 109 aa11.8□□□□□ -0.52
TRAPPC6A-201ENST00000006275 COLCA2A8K830 154 aa11.79□□□□□ -0.52
TRAPPC6A-201ENST00000006275 SMIM1B2RUZ4 78 aa11.79□□□□□ -0.52
TRAPPC6A-201ENST00000006275 Q6ZRP5 223 aa11.79□□□□□ -0.52
TRAPPC6A-201ENST00000006275 A0A1W2PNN7 141 aa11.78□□□□□ -0.52
TRAPPC6A-201ENST00000006275 H3BRM9 83 aa11.78□□□□□ -0.52
TRAPPC6A-201ENST00000006275 IGLC3P0DOY3 106 aa11.78□□□□□ -0.52
TRAPPC6A-201ENST00000006275 GAGE2EQ4V326 116 aa11.78□□□□□ -0.52
TRAPPC6A-201ENST00000006275 C9orf116Q5BN46 136 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC6A-201ENST00000006275 GAGE2DQ9UEU5 116 aa11.78□□□□□ -0.52
TRAPPC6A-201ENST00000006275 HSBP1O75506 76 aa11.77□□□□□ -0.53
TRAPPC6A-201ENST00000006275 SPINK8P0C7L1 97 aa11.77□□□□□ -0.53
TRAPPC6A-201ENST00000006275 CXCL5P42830 114 aa11.76□□□□□ -0.53
TRAPPC6A-201ENST00000006275 COX7B2Q8TF08 81 aa11.76□□□□□ -0.53
TRAPPC6A-201ENST00000006275 NDUFC2-KCTD14E9PQ53 114 aa11.75□□□□□ -0.53
TRAPPC6A-201ENST00000006275 F8VRH5 84 aa11.75□□□□□ -0.53
TRAPPC6A-201ENST00000006275 FAM19A2Q8N3H0 131 aa11.74□□□□□ -0.53
TRAPPC6A-201ENST00000006275 IFI27L1Q96BM0 104 aa11.74□□□□□ -0.53
TRAPPC6A-201ENST00000006275 SCO1O75880 301 aa11.73□□□□□ -0.53
TRAPPC6A-201ENST00000006275 ZNF22P17026 224 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC6A-201ENST00000006275 PRR3P79522 188 aaKnown RBP11.73□□□□□ -0.53
TRAPPC6A-201ENST00000006275 CHTOPQ9Y3Y2 248 aaKnown RBP11.72□□□□□ -0.53
TRAPPC6A-201ENST00000006275 FAM168BA1KXE4 195 aa11.71□□□□□ -0.53
TRAPPC6A-201ENST00000006275 TRAV12-1A0A0B4J245 112 aa11.7□□□□□ -0.54
TRAPPC6A-201ENST00000006275 C11orf86A6NJI1 115 aa11.7□□□□□ -0.54
TRAPPC6A-201ENST00000006275 SERF1AO75920 110 aa11.7□□□□□ -0.54
TRAPPC6A-201ENST00000006275 KRTAP10-8P60410 259 aa11.7□□□□□ -0.54
TRAPPC6A-201ENST00000006275 TMEM170BQ5T4T1 132 aa11.7□□□□□ -0.54
TRAPPC6A-201ENST00000006275 PHF5AQ7RTV0 110 aaKnown RBP11.7□□□□□ -0.54
TRAPPC6A-201ENST00000006275 FAM19A5Q7Z5A7 132 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC6A-201ENST00000006275 LINC00310P59036 64 aa11.69□□□□□ -0.54
TRAPPC6A-201ENST00000006275 REG3GQ6UW15 175 aa11.69□□□□□ -0.54
TRAPPC6A-201ENST00000006275 IGLV5-39A0A0G2JS06 123 aa11.68□□□□□ -0.54
TRAPPC6A-201ENST00000006275 C9orf129Q5T035 196 aaKnown RBP11.68□□□□□ -0.54
TRAPPC6A-201ENST00000006275 LEPROTL1O95214 131 aa11.67□□□□□ -0.54
TRAPPC6A-201ENST00000006275 NUPR1O60356 82 aa11.65□□□□□ -0.54
TRAPPC6A-201ENST00000006275 SPINK6Q6UWN8 80 aa11.65□□□□□ -0.54
TRAPPC6A-201ENST00000006275 XAGE1AQ9HD64 81 aa11.65□□□□□ -0.54
TRAPPC6A-201ENST00000006275 H0Y8G0 127 aa11.64□□□□□ -0.55
TRAPPC6A-201ENST00000006275 M0QXV9 152 aa11.64□□□□□ -0.55
TRAPPC6A-201ENST00000006275 KRTAP7-1Q8IUC3 87 aa11.64□□□□□ -0.55
TRAPPC6A-201ENST00000006275 PSORS1C2Q9UIG4 136 aa11.63□□□□□ -0.55
TRAPPC6A-201ENST00000006275 HSPB8Q9UJY1 196 aa11.63□□□□□ -0.55
TRAPPC6A-201ENST00000006275 FABP4P15090 132 aa11.62□□□□□ -0.55
TRAPPC6A-201ENST00000006275 TMEM223A0PJW6 202 aa11.61□□□□□ -0.55
TRAPPC6A-201ENST00000006275 HIST1H2BKO60814 126 aa11.6□□□□□ -0.55
TRAPPC6A-201ENST00000006275 HIST1H2BJP06899 126 aa11.6□□□□□ -0.55
TRAPPC6A-201ENST00000006275 HIST1H2BOP23527 126 aa11.6□□□□□ -0.55
TRAPPC6A-201ENST00000006275 HIST1H2BBP33778 126 aa11.6□□□□□ -0.55
TRAPPC6A-201ENST00000006275 HIST1H2BDP58876 126 aa11.6□□□□□ -0.55
TRAPPC6A-201ENST00000006275 HIST1H2BCP62807 126 aa11.6□□□□□ -0.55
TRAPPC6A-201ENST00000006275 UBE2BP63146 152 aa11.6□□□□□ -0.55
TRAPPC6A-201ENST00000006275 HIST2H2BEQ16778 126 aa11.6□□□□□ -0.55
TRAPPC6A-201ENST00000006275 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC6A-201ENST00000006275 HIST1H2BHQ93079 126 aa11.6□□□□□ -0.55
TRAPPC6A-201ENST00000006275 HIST1H2BNQ99877 126 aa11.6□□□□□ -0.55
TRAPPC6A-201ENST00000006275 HIST1H2BMQ99879 126 aa11.6□□□□□ -0.55
TRAPPC6A-201ENST00000006275 PFN2P35080 140 aa11.59□□□□□ -0.55
TRAPPC6A-201ENST00000006275 C1orf137Q5JT78 98 aa11.59□□□□□ -0.55
TRAPPC6A-201ENST00000006275 SFTA2Q6UW10 78 aa11.59□□□□□ -0.55
TRAPPC6A-201ENST00000006275 ZNF625Q96I27 306 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC6A-201ENST00000006275 C22orf24Q9Y442 160 aa11.58□□□□□ -0.56
TRAPPC6A-201ENST00000006275 KRTAP11-1Q8IUC1 163 aa11.57□□□□□ -0.56
TRAPPC6A-201ENST00000006275 KRTAP9-2Q9BYQ4 174 aa11.57□□□□□ -0.56
TRAPPC6A-201ENST00000006275 ERG28Q9UKR5 140 aa11.57□□□□□ -0.56
TRAPPC6A-201ENST00000006275 SRSF9Q13242 221 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRAPPC6A-201ENST00000006275 LBHQ53QV2 105 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC6A-201ENST00000006275 COX17Q14061 63 aa11.54□□□□□ -0.56
TRAPPC6A-201ENST00000006275 MAP1LC3CQ9BXW4 147 aa11.54□□□□□ -0.56
TRAPPC6A-201ENST00000006275 TP73-AS1Q9UF72 201 aa11.54□□□□□ -0.56
TRAPPC6A-201ENST00000006275 PLNP26678 52 aa11.53□□□□□ -0.56
TRAPPC6A-201ENST00000006275 PMCHL2Q9BQD1 86 aa11.53□□□□□ -0.56
TRAPPC6A-201ENST00000006275 LPAP08519 4548 aa11.53□□□□□ -0.56
TRAPPC6A-201ENST00000006275 DPM2O94777 84 aa11.52□□□□□ -0.57
TRAPPC6A-201ENST00000006275 IGLV7-43P04211 117 aa11.52□□□□□ -0.57
TRAPPC6A-201ENST00000006275 MRPL55Q7Z7F7 128 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms