RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 CHAC1Q9BUX1 264 aa13.93□□□□□ -0.18
SCARB2-219ENST00000639738 TRAV9-2A0A087WT02 112 aa13.92□□□□□ -0.18
SCARB2-219ENST00000639738 TRAV8-4A0A0B4J246 113 aa13.92□□□□□ -0.18
SCARB2-219ENST00000639738 NBDYA0A0U1RRE5 68 aa13.92□□□□□ -0.18
SCARB2-219ENST00000639738 ATOH7Q8N100 152 aa13.92□□□□□ -0.18
SCARB2-219ENST00000639738 CHCHD10Q8WYQ3 142 aaPredicted RBP13.92□□□□□ -0.18
SCARB2-219ENST00000639738 IGLV10-54A0A075B6I4 117 aa13.91□□□□□ -0.18
SCARB2-219ENST00000639738 CDKN2A-AS1Q9UH64 79 aa13.91□□□□□ -0.18
SCARB2-219ENST00000639738 CRPP02741 224 aa13.9□□□□□ -0.18
SCARB2-219ENST00000639738 HERVK_113P63121 156 aa13.9□□□□□ -0.18
SCARB2-219ENST00000639738 SEC11AP67812 179 aa13.9□□□□□ -0.18
SCARB2-219ENST00000639738 FOXI1Q12951 378 aa13.9□□□□□ -0.19
SCARB2-219ENST00000639738 CD164L2Q6UWJ8 174 aa13.9□□□□□ -0.19
SCARB2-219ENST00000639738 Q6ZR54 194 aa13.9□□□□□ -0.19
SCARB2-219ENST00000639738 DNAH10Q8IVF4 4471 aa13.89□□□□□ -0.19
SCARB2-219ENST00000639738 TRAV8-3A0A0A6YYJ7 113 aa13.89□□□□□ -0.19
SCARB2-219ENST00000639738 LY6G6CO95867 125 aa13.89□□□□□ -0.19
SCARB2-219ENST00000639738 XCL1P47992 114 aa13.89□□□□□ -0.19
SCARB2-219ENST00000639738 MAJINQ3KP22 176 aa13.89□□□□□ -0.19
SCARB2-219ENST00000639738 GEMIN7Q9H840 131 aaKnown RBP13.88□□□□□ -0.19
SCARB2-219ENST00000639738 DNAH2Q9P225 4427 aa13.87□□□□□ -0.19
SCARB2-219ENST00000639738 hDV102S1A0JD36 115 aa13.86□□□□□ -0.19
SCARB2-219ENST00000639738 TMEM223A0PJW6 202 aa13.86□□□□□ -0.19
SCARB2-219ENST00000639738 GAGE12HA6NDE8 117 aa13.86□□□□□ -0.19
SCARB2-219ENST00000639738 SMIM6P0DI80 62 aa13.86□□□□□ -0.19
SCARB2-219ENST00000639738 TTC32Q5I0X7 151 aa13.86□□□□□ -0.19
SCARB2-219ENST00000639738 STPG4Q8N801 248 aa13.86□□□□□ -0.19
SCARB2-219ENST00000639738 Q9HAA7 133 aa13.86□□□□□ -0.19
SCARB2-219ENST00000639738 A0A087WZ39 114 aa13.85□□□□□ -0.19
SCARB2-219ENST00000639738 LINC00469Q8N7U9 141 aa13.85□□□□□ -0.19
SCARB2-219ENST00000639738 HYDINQ4G0P3 5121 aa13.85□□□□□ -0.19
SCARB2-219ENST00000639738 TMEM170BQ5T4T1 132 aa13.85□□□□□ -0.19
SCARB2-219ENST00000639738 ANKRD39Q53RE8 183 aa13.84□□□□□ -0.19
SCARB2-219ENST00000639738 C5orf38Q86SI9 138 aa13.84□□□□□ -0.19
SCARB2-219ENST00000639738 MAPKAPK5-AS1Q8N8E1 139 aa13.84□□□□□ -0.19
SCARB2-219ENST00000639738 C1orf43Q9BWL3 253 aa13.84□□□□□ -0.19
SCARB2-219ENST00000639738 LINC01561Q8N1V8 128 aa13.83□□□□□ -0.2
SCARB2-219ENST00000639738 IGKV2D-24A0A075B6R9 120 aa13.82□□□□□ -0.2
SCARB2-219ENST00000639738 IGLV5-39A0A0G2JS06 123 aa13.82□□□□□ -0.2
SCARB2-219ENST00000639738 SMIM1B2RUZ4 78 aa13.82□□□□□ -0.2
SCARB2-219ENST00000639738 Q6ZRN7 208 aaPredicted RBP13.82□□□□□ -0.2
SCARB2-219ENST00000639738 EPPK1P58107 5090 aaKnown RBP13.81□□□□□ -0.2
SCARB2-219ENST00000639738 M0R2N4 97 aa13.81□□□□□ -0.2
SCARB2-219ENST00000639738 SPINK8P0C7L1 97 aa13.8□□□□□ -0.2
SCARB2-219ENST00000639738 IGKV2D-26A0A0A0MRZ7 120 aa13.8□□□□□ -0.2
SCARB2-219ENST00000639738 COX7A2LO14548 114 aa13.8□□□□□ -0.2
SCARB2-219ENST00000639738 LINC00518Q8N0U6 118 aa13.8□□□□□ -0.2
SCARB2-219ENST00000639738 E9PLD3 99 aa13.79□□□□□ -0.2
SCARB2-219ENST00000639738 H3BRM9 83 aa13.79□□□□□ -0.2
SCARB2-219ENST00000639738 RMI2Q96E14 147 aa13.79□□□□□ -0.2
SCARB2-219ENST00000639738 IGHV1-58A0A0C4DH39 117 aa13.77□□□□□ -0.21
SCARB2-219ENST00000639738 IGHV3-64A0A075B6Q5 118 aa13.76□□□□□ -0.21
SCARB2-219ENST00000639738 TSPEAR-AS2P59090 65 aa13.76□□□□□ -0.21
SCARB2-219ENST00000639738 C12orf57Q99622 126 aa13.76□□□□□ -0.21
SCARB2-219ENST00000639738 VAMP8Q9BV40 100 aa13.76□□□□□ -0.21
SCARB2-219ENST00000639738 COX11Q9Y6N1 276 aa13.76□□□□□ -0.21
SCARB2-219ENST00000639738 C15orf56Q8N910 161 aa13.75□□□□□ -0.21
SCARB2-219ENST00000639738 TM2D2Q9BX73 214 aa13.75□□□□□ -0.21
SCARB2-219ENST00000639738 PAM16Q9Y3D7 125 aa13.75□□□□□ -0.21
SCARB2-219ENST00000639738 LEPROTO15243 131 aa13.74□□□□□ -0.21
SCARB2-219ENST00000639738 KIAA0087Q14695 138 aa13.74□□□□□ -0.21
SCARB2-219ENST00000639738 DNAH17Q9UFH2 4485 aa13.74□□□□□ -0.21
SCARB2-219ENST00000639738 HERVK_113P61574 105 aa13.74□□□□□ -0.21
SCARB2-219ENST00000639738 SPATA45Q537H7 98 aa13.74□□□□□ -0.21
SCARB2-219ENST00000639738 C6orf223Q8N319 242 aa13.73□□□□□ -0.21
SCARB2-219ENST00000639738 HSBP1L1C9JCN9 74 aa13.72□□□□□ -0.21
SCARB2-219ENST00000639738 FRAS1Q86XX4 4008 aa13.72□□□□□ -0.21
SCARB2-219ENST00000639738 J3QQQ9 107 aa13.7□□□□□ -0.22
SCARB2-219ENST00000639738 MALP21145 153 aa13.7□□□□□ -0.22
SCARB2-219ENST00000639738 WFDC2Q14508 124 aa13.7□□□□□ -0.22
SCARB2-219ENST00000639738 PLEKHB2Q96CS7 222 aa13.7□□□□□ -0.22
SCARB2-219ENST00000639738 TTTY13Q9BZ97 58 aa13.7□□□□□ -0.22
SCARB2-219ENST00000639738 PCP2Q8IVA1 136 aa13.69□□□□□ -0.22
SCARB2-219ENST00000639738 ORAOV1Q8WV07 137 aa13.69□□□□□ -0.22
SCARB2-219ENST00000639738 LRCOL1A6NCL2 159 aa13.69□□□□□ -0.22
SCARB2-219ENST00000639738 S100A12P80511 92 aa13.69□□□□□ -0.22
SCARB2-219ENST00000639738 Q8IZM0 81 aa13.69□□□□□ -0.22
SCARB2-219ENST00000639738 COX7B2Q8TF08 81 aa13.69□□□□□ -0.22
SCARB2-219ENST00000639738 BIRC6Q9NR09 4857 aa13.68□□□□□ -0.22
SCARB2-219ENST00000639738 GVQW2A0A096LPI5 108 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-219ENST00000639738 USP17L23D6RBM5 183 aa13.68□□□□□ -0.22
SCARB2-219ENST00000639738 APOMO95445 188 aa13.68□□□□□ -0.22
SCARB2-219ENST00000639738 C1orf134Q5TEV5 83 aa13.68□□□□□ -0.22
SCARB2-219ENST00000639738 NMUP48645 174 aa13.67□□□□□ -0.22
SCARB2-219ENST00000639738 ZNF625Q96I27 306 aaPredicted RBP13.67□□□□□ -0.22
SCARB2-219ENST00000639738 COX8AP10176 69 aa13.66□□□□□ -0.22
SCARB2-219ENST00000639738 LINC00526Q96FQ7 95 aa13.66□□□□□ -0.22
SCARB2-219ENST00000639738 NTN5Q8WTR8 489 aaPredicted RBP13.65□□□□□ -0.22
SCARB2-219ENST00000639738 C14orf144Q96I85 54 aa13.65□□□□□ -0.22
SCARB2-219ENST00000639738 TOMM7Q9P0U1 55 aa13.65□□□□□ -0.22
SCARB2-219ENST00000639738 TP73-AS1Q9UF72 201 aa13.65□□□□□ -0.22
SCARB2-219ENST00000639738 LECT2O14960 151 aa13.64□□□□□ -0.23
SCARB2-219ENST00000639738 SPAG11BQ08648 103 aa13.64□□□□□ -0.23
SCARB2-219ENST00000639738 HIGD2BQ4VC39 106 aa13.64□□□□□ -0.23
SCARB2-219ENST00000639738 CFAP161Q6P656 301 aa13.64□□□□□ -0.23
SCARB2-219ENST00000639738 BOD1L2Q8IYS8 172 aa13.64□□□□□ -0.23
SCARB2-219ENST00000639738 RTL8CO15255 209 aa13.64□□□□□ -0.23
SCARB2-219ENST00000639738 PSCAO43653 123 aa13.64□□□□□ -0.23
SCARB2-219ENST00000639738 NDUFA1O15239 70 aa13.63□□□□□ -0.23
SCARB2-219ENST00000639738 LGALS3P17931 250 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms