RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 MRAP2Q96G30 205 aa3.37□□□□□ -1.87
PDE4D-229ENST00000638939 TMEM101Q96IK0 257 aa3.37□□□□□ -1.87
PDE4D-229ENST00000638939 K7EN84 100 aa3.36□□□□□ -1.87
PDE4D-229ENST00000638939 APOMO95445 188 aa3.36□□□□□ -1.87
PDE4D-229ENST00000638939 TSHBP01222 138 aa3.36□□□□□ -1.87
PDE4D-229ENST00000638939 ESDP10768 282 aa3.36□□□□□ -1.87
PDE4D-229ENST00000638939 SS18Q15532 418 aa3.36□□□□□ -1.87
PDE4D-229ENST00000638939 PSORS1C2Q9UIG4 136 aa3.36□□□□□ -1.87
PDE4D-229ENST00000638939 IGLV4-69A0A075B6H9 119 aa3.35□□□□□ -1.87
PDE4D-229ENST00000638939 TRBV27A0A0K0K1C4 114 aa3.35□□□□□ -1.87
PDE4D-229ENST00000638939 C7orf77A4D0Y5 90 aa3.35□□□□□ -1.87
PDE4D-229ENST00000638939 SMIM1B2RUZ4 78 aa3.35□□□□□ -1.87
PDE4D-229ENST00000638939 MT-ND6P03923 174 aa3.35□□□□□ -1.87
PDE4D-229ENST00000638939 IGKV2-30P06310 120 aa3.35□□□□□ -1.87
PDE4D-229ENST00000638939 NUP35Q8NFH5 326 aa3.35□□□□□ -1.87
PDE4D-229ENST00000638939 LINC00526Q96FQ7 95 aa3.35□□□□□ -1.87
PDE4D-229ENST00000638939 C2orf48Q96LS8 159 aa3.35□□□□□ -1.87
PDE4D-229ENST00000638939 RNASE7Q9H1E1 156 aaKnown RBP3.35□□□□□ -1.87
PDE4D-229ENST00000638939 CDC42SE2Q9NRR3 84 aa3.35□□□□□ -1.87
PDE4D-229ENST00000638939 MED9Q9NWA0 146 aa3.35□□□□□ -1.87
PDE4D-229ENST00000638939 CSDC2Q9Y534 153 aaKnown RBP3.35□□□□□ -1.87
PDE4D-229ENST00000638939 A0A1W2PNN7 141 aa3.34□□□□□ -1.87
PDE4D-229ENST00000638939 C1orf196B1AJZ1 125 aa3.34□□□□□ -1.87
PDE4D-229ENST00000638939 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.34□□□□□ -1.87
PDE4D-229ENST00000638939 COX7A2LO14548 114 aa3.34□□□□□ -1.87
PDE4D-229ENST00000638939 PMCHP20382 165 aa3.34□□□□□ -1.87
PDE4D-229ENST00000638939 SMAGPQ0VAQ4 97 aa3.34□□□□□ -1.87
PDE4D-229ENST00000638939 C9orf116Q5BN46 136 aaPredicted RBP3.34□□□□□ -1.87
PDE4D-229ENST00000638939 FAM231DQ6ZW35 169 aa3.34□□□□□ -1.87
PDE4D-229ENST00000638939 TSKUQ8WUA8 353 aa3.34□□□□□ -1.87
PDE4D-229ENST00000638939 DIRC1Q969H9 104 aa3.34□□□□□ -1.87
PDE4D-229ENST00000638939 CAMK2N2Q96S95 79 aa3.34□□□□□ -1.87
PDE4D-229ENST00000638939 ST20Q9HBF5 79 aa3.34□□□□□ -1.87
PDE4D-229ENST00000638939 TMEM242Q9NWH2 141 aa3.34□□□□□ -1.87
PDE4D-229ENST00000638939 IGLV1-50A0A075B6I6 118 aa3.33□□□□□ -1.88
PDE4D-229ENST00000638939 A8MWL6 223 aa3.33□□□□□ -1.88
PDE4D-229ENST00000638939 H0Y9J4 135 aa3.33□□□□□ -1.88
PDE4D-229ENST00000638939 TMEM250H0YL14 139 aa3.33□□□□□ -1.88
PDE4D-229ENST00000638939 POLR2KP53803 58 aaKnown RBP3.33□□□□□ -1.88
PDE4D-229ENST00000638939 FOXA3P55318 350 aaPredicted RBP3.33□□□□□ -1.88
PDE4D-229ENST00000638939 RPL18AQ02543 176 aaKnown RBP3.33□□□□□ -1.88
PDE4D-229ENST00000638939 SPAG11BQ08648 103 aa3.33□□□□□ -1.88
PDE4D-229ENST00000638939 C1orf137Q5JT78 98 aa3.33□□□□□ -1.88
PDE4D-229ENST00000638939 ERASQ7Z444 233 aa3.33□□□□□ -1.88
PDE4D-229ENST00000638939 OR10D4PQ8NGN7 298 aa3.33□□□□□ -1.88
PDE4D-229ENST00000638939 BORCS7Q96B45 105 aa3.33□□□□□ -1.88
PDE4D-229ENST00000638939 TMEM191AQ9H0A3 160 aa3.33□□□□□ -1.88
PDE4D-229ENST00000638939 UBE2D4Q9Y2X8 147 aa3.33□□□□□ -1.88
PDE4D-229ENST00000638939 A0A0U1RQV1 116 aa3.32□□□□□ -1.88
PDE4D-229ENST00000638939 A0A1B0GUT8 65 aa3.32□□□□□ -1.88
PDE4D-229ENST00000638939 GATCO43716 136 aaKnown RBP3.32□□□□□ -1.88
PDE4D-229ENST00000638939 IGLV7-43P04211 117 aa3.32□□□□□ -1.88
PDE4D-229ENST00000638939 KRTAP1-4P0C5Y4 121 aa3.32□□□□□ -1.88
PDE4D-229ENST00000638939 TLX1NBP0CAT3 122 aa3.32□□□□□ -1.88
PDE4D-229ENST00000638939 RIGQ13278 110 aa3.32□□□□□ -1.88
PDE4D-229ENST00000638939 Q6ZUT4 128 aa3.32□□□□□ -1.88
PDE4D-229ENST00000638939 PHF5AQ7RTV0 110 aaKnown RBP3.32□□□□□ -1.88
PDE4D-229ENST00000638939 TIMM21Q9BVV7 248 aa3.32□□□□□ -1.88
PDE4D-229ENST00000638939 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
PDE4D-229ENST00000638939 KRTAP9-4Q9BYQ2 154 aa3.32□□□□□ -1.88
PDE4D-229ENST00000638939 MRPL35Q9NZE8 188 aaKnown RBP3.32□□□□□ -1.88
PDE4D-229ENST00000638939 FAT4Q6V0I7 4981 aa3.31□□□□□ -1.88
PDE4D-229ENST00000638939 HIGD1CA8MV81 97 aa3.31□□□□□ -1.88
PDE4D-229ENST00000638939 PPP1R2P9O14990 202 aa3.31□□□□□ -1.88
PDE4D-229ENST00000638939 PPP1R17O96001 155 aa3.31□□□□□ -1.88
PDE4D-229ENST00000638939 RAB4AP20338 218 aa3.31□□□□□ -1.88
PDE4D-229ENST00000638939 FCER1GP30273 86 aa3.31□□□□□ -1.88
PDE4D-229ENST00000638939 RPL13AP40429 203 aaKnown RBP3.31□□□□□ -1.88
PDE4D-229ENST00000638939 SLC51BQ86UW2 128 aa3.31□□□□□ -1.88
PDE4D-229ENST00000638939 IMMP2LQ96T52 175 aa3.31□□□□□ -1.88
PDE4D-229ENST00000638939 KIR2DL4Q99706 377 aa3.31□□□□□ -1.88
PDE4D-229ENST00000638939 TRAV13-1A0A0B4J241 112 aa3.3□□□□□ -1.88
PDE4D-229ENST00000638939 NDUFA1O15239 70 aa3.3□□□□□ -1.88
PDE4D-229ENST00000638939 TCAPO15273 167 aa3.3□□□□□ -1.88
PDE4D-229ENST00000638939 RPL32P62910 135 aaKnown RBP3.3□□□□□ -1.88
PDE4D-229ENST00000638939 RNASE13Q5GAN3 156 aaKnown RBP3.3□□□□□ -1.88
PDE4D-229ENST00000638939 C5orf38Q86SI9 138 aa3.3□□□□□ -1.88
PDE4D-229ENST00000638939 AMN1Q8IY45 258 aa3.3□□□□□ -1.88
PDE4D-229ENST00000638939 SMDT1Q9H4I9 107 aa3.3□□□□□ -1.88
PDE4D-229ENST00000638939 IGHV3OR16-9A0A0B4J2B5 98 aa3.29□□□□□ -1.88
PDE4D-229ENST00000638939 FAM168BA1KXE4 195 aa3.29□□□□□ -1.88
PDE4D-229ENST00000638939 M0QXV9 152 aa3.29□□□□□ -1.88
PDE4D-229ENST00000638939 UBE2D1P51668 147 aa3.29□□□□□ -1.88
PDE4D-229ENST00000638939 MRPS36P82909 103 aaKnown RBP3.29□□□□□ -1.88
PDE4D-229ENST00000638939 LINC01551Q86U37 167 aa3.29□□□□□ -1.88
PDE4D-229ENST00000638939 KRTAP11-1Q8IUC1 163 aa3.29□□□□□ -1.88
PDE4D-229ENST00000638939 TCTE3Q8IZS6 198 aa3.29□□□□□ -1.88
PDE4D-229ENST00000638939 ORAOV1Q8WV07 137 aa3.29□□□□□ -1.88
PDE4D-229ENST00000638939 OPRPNQ99935 248 aaPredicted RBP3.29□□□□□ -1.88
PDE4D-229ENST00000638939 C20orf78Q9BR46 151 aa3.29□□□□□ -1.88
PDE4D-229ENST00000638939 OSTCQ9NRP0 149 aa3.29□□□□□ -1.88
PDE4D-229ENST00000638939 SPANXA1Q9NS26 97 aa3.29□□□□□ -1.88
PDE4D-229ENST00000638939 CARHSP1Q9Y2V2 147 aaKnown RBP3.29□□□□□ -1.88
PDE4D-229ENST00000638939 TRBV24-1A0A075B6N3 115 aa3.28□□□□□ -1.88
PDE4D-229ENST00000638939 LINC00862A6NCI5 91 aa3.28□□□□□ -1.88
PDE4D-229ENST00000638939 SMKR1H3BMG3 65 aa3.28□□□□□ -1.88
PDE4D-229ENST00000638939 TMEM241Q24JQ0 296 aa3.28□□□□□ -1.88
PDE4D-229ENST00000638939 LCE3BQ5TA77 95 aa3.28□□□□□ -1.88
PDE4D-229ENST00000638939 FAM19A5Q7Z5A7 132 aaPredicted RBP3.28□□□□□ -1.88
PDE4D-229ENST00000638939 KRTAP7-1Q8IUC3 87 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms