RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 HIGD1BQ9P298 99 aa4.01□□□□□ -1.77
CHD2-227ENST00000637572 C5orf38Q86SI9 138 aa4□□□□□ -1.77
CHD2-227ENST00000637572 NRACQ8N912 160 aa4□□□□□ -1.77
CHD2-227ENST00000637572 KLK12Q9UKR0 248 aa4□□□□□ -1.77
CHD2-227ENST00000637572 PFN2P35080 140 aa4□□□□□ -1.77
CHD2-227ENST00000637572 LINC00310P59036 64 aa4□□□□□ -1.77
CHD2-227ENST00000637572 ADGRG4Q8IZF6 3080 aa4□□□□□ -1.77
CHD2-227ENST00000637572 NUPR2A6NF83 97 aa4□□□□□ -1.77
CHD2-227ENST00000637572 C9orf118A6NHY6 69 aa4□□□□□ -1.77
CHD2-227ENST00000637572 NUPR1O60356 82 aa4□□□□□ -1.77
CHD2-227ENST00000637572 MIAQ16674 131 aa4□□□□□ -1.77
CHD2-227ENST00000637572 RNASE13Q5GAN3 156 aaKnown RBP4□□□□□ -1.77
CHD2-227ENST00000637572 FAM19A4Q96LR4 140 aa4□□□□□ -1.77
CHD2-227ENST00000637572 Q9HAA7 133 aa4□□□□□ -1.77
CHD2-227ENST00000637572 UBE2D3P61077 147 aa3.99□□□□□ -1.77
CHD2-227ENST00000637572 UBE2D2P62837 147 aa3.99□□□□□ -1.77
CHD2-227ENST00000637572 REG3AQ06141 175 aa3.99□□□□□ -1.77
CHD2-227ENST00000637572 CLPSL2Q6UWE3 100 aa3.99□□□□□ -1.77
CHD2-227ENST00000637572 KPRPQ5T749 579 aaPredicted RBP3.99□□□□□ -1.77
CHD2-227ENST00000637572 CEND1Q8N111 149 aa3.99□□□□□ -1.77
CHD2-227ENST00000637572 ZNF625Q96I27 306 aaPredicted RBP3.99□□□□□ -1.77
CHD2-227ENST00000637572 PKD1L1Q8TDX9 2849 aa3.99□□□□□ -1.77
CHD2-227ENST00000637572 A0A1B0GWB2 263 aa3.99□□□□□ -1.77
CHD2-227ENST00000637572 SPAG11BQ08648 103 aa3.99□□□□□ -1.77
CHD2-227ENST00000637572 PRO1854Q9UHT4 67 aa3.99□□□□□ -1.77
CHD2-227ENST00000637572 DSCAML1Q8TD84 2053 aa3.99□□□□□ -1.77
CHD2-227ENST00000637572 APCP25054 2843 aa3.99□□□□□ -1.77
CHD2-227ENST00000637572 P0DMU3 169 aa3.99□□□□□ -1.77
CHD2-227ENST00000637572 FAM231AP0DMU4 169 aa3.99□□□□□ -1.77
CHD2-227ENST00000637572 FAM231CP0DMU5 169 aa3.99□□□□□ -1.77
CHD2-227ENST00000637572 Q6ZUT4 128 aa3.99□□□□□ -1.77
CHD2-227ENST00000637572 MUC7Q8TAX7 377 aa3.99□□□□□ -1.77
CHD2-227ENST00000637572 IGLV4-3A0A075B6K6 122 aa3.98□□□□□ -1.77
CHD2-227ENST00000637572 H3BQ85 93 aa3.98□□□□□ -1.77
CHD2-227ENST00000637572 TSHBP01222 138 aa3.98□□□□□ -1.77
CHD2-227ENST00000637572 F8WEM9 126 aa3.98□□□□□ -1.77
CHD2-227ENST00000637572 EDA2RQ9HAV5 297 aa3.98□□□□□ -1.77
CHD2-227ENST00000637572 SMG1Q96Q15 3661 aaKnown RBP3.98□□□□□ -1.77
CHD2-227ENST00000637572 NPC2P61916 151 aa3.97□□□□□ -1.77
CHD2-227ENST00000637572 KRTAP1-1Q07627 177 aa3.97□□□□□ -1.77
CHD2-227ENST00000637572 BVES-AS1Q5T3Y7 98 aa3.97□□□□□ -1.77
CHD2-227ENST00000637572 LINC00173Q6ZV60 143 aa3.97□□□□□ -1.77
CHD2-227ENST00000637572 CSDC2Q9Y534 153 aaKnown RBP3.97□□□□□ -1.77
CHD2-227ENST00000637572 IGLV10-54A0A075B6I4 117 aa3.97□□□□□ -1.77
CHD2-227ENST00000637572 A0A0J9YWU9 116 aa3.97□□□□□ -1.77
CHD2-227ENST00000637572 LINC00269Q8N2A0 174 aa3.97□□□□□ -1.77
CHD2-227ENST00000637572 CELSR2Q9HCU4 2923 aa3.97□□□□□ -1.77
CHD2-227ENST00000637572 RBX1P62877 108 aa3.97□□□□□ -1.77
CHD2-227ENST00000637572 UFSP1Q6NVU6 142 aa3.97□□□□□ -1.77
CHD2-227ENST00000637572 WWC2-AS2Q96NR7 200 aa3.97□□□□□ -1.77
CHD2-227ENST00000637572 TET2Q6N021 2002 aaPredicted RBP3.97□□□□□ -1.77
CHD2-227ENST00000637572 A0A0J9YXY3 114 aa3.97□□□□□ -1.77
CHD2-227ENST00000637572 GAGE12HA6NDE8 117 aa3.97□□□□□ -1.77
CHD2-227ENST00000637572 CD164L2Q6UWJ8 174 aa3.97□□□□□ -1.77
CHD2-227ENST00000637572 CHCHD10Q8WYQ3 142 aaPredicted RBP3.97□□□□□ -1.77
CHD2-227ENST00000637572 ZFHX4Q86UP3 3567 aa3.96□□□□□ -1.77
CHD2-227ENST00000637572 LY6G6CO95867 125 aa3.96□□□□□ -1.77
CHD2-227ENST00000637572 A8MTW9 85 aa3.96□□□□□ -1.78
CHD2-227ENST00000637572 H0YGX0 51 aa3.96□□□□□ -1.78
CHD2-227ENST00000637572 K7EP13 123 aa3.96□□□□□ -1.78
CHD2-227ENST00000637572 UBE2D4Q9Y2X8 147 aa3.96□□□□□ -1.78
CHD2-227ENST00000637572 DMBT1Q9UGM3 2413 aaPredicted RBP3.96□□□□□ -1.78
CHD2-227ENST00000637572 A0A1B0GV90 55 aa3.96□□□□□ -1.78
CHD2-227ENST00000637572 H3BNG1 76 aa3.96□□□□□ -1.78
CHD2-227ENST00000637572 FHL2Q14192 279 aa3.96□□□□□ -1.78
CHD2-227ENST00000637572 PCP2Q8IVA1 136 aa3.96□□□□□ -1.78
CHD2-227ENST00000637572 SND1-IT1Q9HBX3 110 aa3.95□□□□□ -1.78
CHD2-227ENST00000637572 IBA57-AS1B1ANH7 110 aa3.95□□□□□ -1.78
CHD2-227ENST00000637572 C11orf72Q8NBR9 251 aa3.95□□□□□ -1.78
CHD2-227ENST00000637572 CFC1BP0CG36 223 aa3.95□□□□□ -1.78
CHD2-227ENST00000637572 CFC1P0CG37 223 aa3.95□□□□□ -1.78
CHD2-227ENST00000637572 INAFM2P0DMQ5 153 aa3.95□□□□□ -1.78
CHD2-227ENST00000637572 ZNF22P17026 224 aaPredicted RBP3.95□□□□□ -1.78
CHD2-227ENST00000637572 TMEM223A0PJW6 202 aa3.95□□□□□ -1.78
CHD2-227ENST00000637572 F8WDY8 70 aa3.95□□□□□ -1.78
CHD2-227ENST00000637572 TSPAN13O95857 204 aa3.95□□□□□ -1.78
CHD2-227ENST00000637572 A0A1B0GUV1 79 aa3.94□□□□□ -1.78
CHD2-227ENST00000637572 TIMM17BO60830 172 aa3.94□□□□□ -1.78
CHD2-227ENST00000637572 NANOS2P60321 138 aaKnown RBP3.94□□□□□ -1.78
CHD2-227ENST00000637572 UBE2BP63146 152 aa3.94□□□□□ -1.78
CHD2-227ENST00000637572 C12orf74Q32Q52 190 aa3.94□□□□□ -1.78
CHD2-227ENST00000637572 C2orf82Q6UX34 121 aa3.94□□□□□ -1.78
CHD2-227ENST00000637572 CDC42SE2Q9NRR3 84 aa3.94□□□□□ -1.78
CHD2-227ENST00000637572 LORP23490 312 aaPredicted RBP3.94□□□□□ -1.78
CHD2-227ENST00000637572 RPL18AQ02543 176 aaKnown RBP3.94□□□□□ -1.78
CHD2-227ENST00000637572 CEMP1Q6PRD7 247 aaPredicted RBP3.94□□□□□ -1.78
CHD2-227ENST00000637572 TMEM126AQ9H061 195 aa3.94□□□□□ -1.78
CHD2-227ENST00000637572 CDKN2A-AS1Q9UH64 79 aa3.94□□□□□ -1.78
CHD2-227ENST00000637572 LAMTOR3Q9UHA4 124 aa3.94□□□□□ -1.78
CHD2-227ENST00000637572 SPENQ96T58 3664 aaKnown RBP3.94□□□□□ -1.78
CHD2-227ENST00000637572 TGP01266 2768 aa3.94□□□□□ -1.78
CHD2-227ENST00000637572 IGIPA6NJ69 53 aa3.94□□□□□ -1.78
CHD2-227ENST00000637572 OPRPNQ99935 248 aaPredicted RBP3.94□□□□□ -1.78
CHD2-227ENST00000637572 KIF25-AS1Q9Y6Z4 181 aa3.94□□□□□ -1.78
CHD2-227ENST00000637572 LINC00959A0A1B0GUT2 108 aa3.93□□□□□ -1.78
CHD2-227ENST00000637572 G3V4G9 280 aa3.93□□□□□ -1.78
CHD2-227ENST00000637572 LINC01561Q8N1V8 128 aa3.93□□□□□ -1.78
CHD2-227ENST00000637572 NACAE9PAV3 2078 aa3.93□□□□□ -1.78
CHD2-227ENST00000637572 POM121L12Q8N7R1 296 aa3.93□□□□□ -1.78
CHD2-227ENST00000637572 SNHG12Q9BXW3 62 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 212 ms