RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 UBE2L6O14933 153 aa5.75□□□□□ -1.49
GPC3-204ENST00000631057 TRIAP1O43715 76 aa5.75□□□□□ -1.49
GPC3-204ENST00000631057 LINC00694P0DN24 101 aa5.75□□□□□ -1.49
GPC3-204ENST00000631057 COX6A2Q02221 97 aa5.75□□□□□ -1.49
GPC3-204ENST00000631057 GAGE4Q13068 117 aa5.75□□□□□ -1.49
GPC3-204ENST00000631057 GAGE5Q13069 117 aa5.75□□□□□ -1.49
GPC3-204ENST00000631057 LINC01620Q4KN68 170 aa5.75□□□□□ -1.49
GPC3-204ENST00000631057 NTM-AS1Q6ZSK4 140 aa5.75□□□□□ -1.49
GPC3-204ENST00000631057 LINC01600Q96MT4 127 aa5.75□□□□□ -1.49
GPC3-204ENST00000631057 OVOL2Q9BRP0 275 aa5.75□□□□□ -1.49
GPC3-204ENST00000631057 MTORP42345 2549 aa5.74□□□□□ -1.49
GPC3-204ENST00000631057 TRGV2A0A075B6R0 118 aa5.74□□□□□ -1.49
GPC3-204ENST00000631057 TRBV6-4A0A1B0GX49 114 aa5.74□□□□□ -1.49
GPC3-204ENST00000631057 SMIM1B2RUZ4 78 aa5.74□□□□□ -1.49
GPC3-204ENST00000631057 H7C423 109 aa5.74□□□□□ -1.49
GPC3-204ENST00000631057 NDUFA7O95182 113 aa5.74□□□□□ -1.49
GPC3-204ENST00000631057 RPL35AP18077 110 aaKnown RBP5.74□□□□□ -1.49
GPC3-204ENST00000631057 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.74□□□□□ -1.49
GPC3-204ENST00000631057 Q9H8V8 135 aa5.74□□□□□ -1.49
GPC3-204ENST00000631057 CDC42SE2Q9NRR3 84 aa5.74□□□□□ -1.49
GPC3-204ENST00000631057 C19orf73Q9NVV2 129 aa5.74□□□□□ -1.49
GPC3-204ENST00000631057 SETXQ7Z333 2677 aaKnown RBP5.73□□□□□ -1.49
GPC3-204ENST00000631057 TRAV13-1A0A0B4J241 112 aa5.73□□□□□ -1.49
GPC3-204ENST00000631057 TRBV10-2A0A0K0K1G8 114 aa5.73□□□□□ -1.49
GPC3-204ENST00000631057 PLAC8L1A1L4L8 177 aa5.73□□□□□ -1.49
GPC3-204ENST00000631057 TMEM262E9PQX1 116 aa5.73□□□□□ -1.49
GPC3-204ENST00000631057 GAGE7O76087 117 aa5.73□□□□□ -1.49
GPC3-204ENST00000631057 GAGE12FP0CL80 117 aa5.73□□□□□ -1.49
GPC3-204ENST00000631057 GAGE12GP0CL81 117 aa5.73□□□□□ -1.49
GPC3-204ENST00000631057 GAGE12IP0CL82 117 aa5.73□□□□□ -1.49
GPC3-204ENST00000631057 RPL13AP40429 203 aaKnown RBP5.73□□□□□ -1.49
GPC3-204ENST00000631057 NPC2P61916 151 aa5.73□□□□□ -1.49
GPC3-204ENST00000631057 HERV-K104P63124 156 aa5.73□□□□□ -1.49
GPC3-204ENST00000631057 ANK3Q12955 4377 aaKnown RBP5.73□□□□□ -1.49
GPC3-204ENST00000631057 ZNF469Q96JG9 3925 aaPredicted RBP5.73□□□□□ -1.49
GPC3-204ENST00000631057 TRGV4A0A0C4DH28 118 aa5.72□□□□□ -1.49
GPC3-204ENST00000631057 HILS1P60008 231 aa5.72□□□□□ -1.49
GPC3-204ENST00000631057 CSNK1G2-AS1Q8NCQ2 148 aa5.72□□□□□ -1.49
GPC3-204ENST00000631057 WFDC10AQ9H1F0 79 aa5.72□□□□□ -1.49
GPC3-204ENST00000631057 NBPF19A0A087WUL8 3843 aa5.72□□□□□ -1.49
GPC3-204ENST00000631057 CYSRT1A8MQ03 144 aa5.72□□□□□ -1.49
GPC3-204ENST00000631057 F5H768 121 aa5.72□□□□□ -1.49
GPC3-204ENST00000631057 H3BT86 120 aa5.72□□□□□ -1.49
GPC3-204ENST00000631057 PRIMA1Q86XR5 153 aa5.72□□□□□ -1.49
GPC3-204ENST00000631057 LINC00308Q8TCZ7 52 aa5.72□□□□□ -1.49
GPC3-204ENST00000631057 ZNF625Q96I27 306 aaPredicted RBP5.72□□□□□ -1.49
GPC3-204ENST00000631057 PPDPFQ9H3Y8 114 aa5.72□□□□□ -1.49
GPC3-204ENST00000631057 PDZD2O15018 2839 aa5.71□□□□□ -1.5
GPC3-204ENST00000631057 MEIG1Q5JSS6 88 aa5.71□□□□□ -1.5
GPC3-204ENST00000631057 DAND5Q8N907 189 aa5.71□□□□□ -1.5
GPC3-204ENST00000631057 PLA2G2DQ9UNK4 145 aa5.71□□□□□ -1.5
GPC3-204ENST00000631057 FLNBO75369 2602 aaKnown RBP5.7□□□□□ -1.5
GPC3-204ENST00000631057 LST1O00453 97 aa5.7□□□□□ -1.5
GPC3-204ENST00000631057 XP32Q5T750 250 aa5.7□□□□□ -1.5
GPC3-204ENST00000631057 C2orf82Q6UX34 121 aa5.7□□□□□ -1.5
GPC3-204ENST00000631057 NTN5Q8WTR8 489 aaPredicted RBP5.7□□□□□ -1.5
GPC3-204ENST00000631057 UNC79Q9P2D8 2635 aa5.7□□□□□ -1.5
GPC3-204ENST00000631057 HECTD1Q9ULT8 2610 aa5.69□□□□□ -1.5
GPC3-204ENST00000631057 TRBV6-8A0A0A6YYG3 113 aa5.69□□□□□ -1.5
GPC3-204ENST00000631057 LOC100131303A0A0U1RQF7 123 aa5.69□□□□□ -1.5
GPC3-204ENST00000631057 USP17L23D6RBM5 183 aa5.69□□□□□ -1.5
GPC3-204ENST00000631057 FHL2Q14192 279 aa5.69□□□□□ -1.5
GPC3-204ENST00000631057 CLEC2BQ92478 149 aa5.69□□□□□ -1.5
GPC3-204ENST00000631057 UBE2WQ96B02 151 aa5.69□□□□□ -1.5
GPC3-204ENST00000631057 KRTAP4-8Q9BYQ9 185 aa5.69□□□□□ -1.5
GPC3-204ENST00000631057 HIVEP2P31629 2446 aa5.69□□□□□ -1.5
GPC3-204ENST00000631057 ITPR2Q14571 2701 aa5.69□□□□□ -1.5
GPC3-204ENST00000631057 A0A1B0GV72 72 aa5.68□□□□□ -1.5
GPC3-204ENST00000631057 XGP55808 180 aa5.68□□□□□ -1.5
GPC3-204ENST00000631057 GAGE6Q13070 117 aa5.68□□□□□ -1.5
GPC3-204ENST00000631057 KIR2DL5BQ8NHK3 375 aa5.68□□□□□ -1.5
GPC3-204ENST00000631057 COX7B2Q8TF08 81 aa5.68□□□□□ -1.5
GPC3-204ENST00000631057 A0A0U1RRA0 63 aa5.67□□□□□ -1.5
GPC3-204ENST00000631057 MT-ATP8P03928 68 aa5.67□□□□□ -1.5
GPC3-204ENST00000631057 SERTAD4-AS1Q5TG53 156 aa5.67□□□□□ -1.5
GPC3-204ENST00000631057 SOSTDC1Q6X4U4 206 aa5.67□□□□□ -1.5
GPC3-204ENST00000631057 LINC00612Q8N6U2 182 aa5.67□□□□□ -1.5
GPC3-204ENST00000631057 CHCHD5Q9BSY4 110 aa5.67□□□□□ -1.5
GPC3-204ENST00000631057 TRAV8-4A0A0B4J246 113 aa5.67□□□□□ -1.5
GPC3-204ENST00000631057 COX7A2LO14548 114 aa5.67□□□□□ -1.5
GPC3-204ENST00000631057 FAM222AQ5U5X8 452 aa5.67□□□□□ -1.5
GPC3-204ENST00000631057 LINC00482Q8N8I6 264 aa5.67□□□□□ -1.5
GPC3-204ENST00000631057 FN1P02751 2386 aaKnown RBP5.66□□□□□ -1.5
GPC3-204ENST00000631057 TEX49A0A1B0GTD5 131 aa5.66□□□□□ -1.5
GPC3-204ENST00000631057 SMIM9A6NGZ8 99 aa5.66□□□□□ -1.5
GPC3-204ENST00000631057 CRLF1O75462 422 aa5.66□□□□□ -1.5
GPC3-204ENST00000631057 LY6G6DO95868 133 aa5.66□□□□□ -1.5
GPC3-204ENST00000631057 IGLV4-60A0A075B6I1 120 aa5.65□□□□□ -1.5
GPC3-204ENST00000631057 A0A087WZ39 114 aa5.65□□□□□ -1.5
GPC3-204ENST00000631057 TRAV13-2A0A0B4J235 113 aa5.65□□□□□ -1.5
GPC3-204ENST00000631057 IGHV3OR16-9A0A0B4J2B5 98 aa5.65□□□□□ -1.5
GPC3-204ENST00000631057 IGKV3OR2-268A0A0C4DH90 116 aa5.65□□□□□ -1.5
GPC3-204ENST00000631057 DEFB130BP0DP73 79 aa5.65□□□□□ -1.5
GPC3-204ENST00000631057 DEFB130AP0DP74 79 aa5.65□□□□□ -1.5
GPC3-204ENST00000631057 CKS1BP61024 79 aa5.65□□□□□ -1.5
GPC3-204ENST00000631057 DEFB121Q5J5C9 76 aa5.65□□□□□ -1.5
GPC3-204ENST00000631057 FAM240AA0A1B0GVK7 77 aa5.64□□□□□ -1.51
GPC3-204ENST00000631057 TRACP01848 142 aa5.64□□□□□ -1.51
GPC3-204ENST00000631057 CRPP02741 224 aa5.64□□□□□ -1.51
GPC3-204ENST00000631057 KRTAP10-3P60369 221 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms