RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 MAPKAPK5-AS1Q8N8E1 139 aa8.64□□□□□ -1.03
SHPRH-211ENST00000629427 TSHBP01222 138 aa8.63□□□□□ -1.03
SHPRH-211ENST00000629427 RETNQ9HD89 108 aa8.63□□□□□ -1.03
SHPRH-211ENST00000629427 DOPEY1Q5JWR5 2465 aa8.63□□□□□ -1.03
SHPRH-211ENST00000629427 NUPR2A6NF83 97 aa8.63□□□□□ -1.03
SHPRH-211ENST00000629427 RNASE3P12724 160 aaKnown RBP8.63□□□□□ -1.03
SHPRH-211ENST00000629427 NDUFV3P56181 108 aaKnown RBP8.63□□□□□ -1.03
SHPRH-211ENST00000629427 TRBV27A0A0K0K1C4 114 aa8.62□□□□□ -1.03
SHPRH-211ENST00000629427 CIRBP-AS1Q8TBR5 109 aa8.62□□□□□ -1.03
SHPRH-211ENST00000629427 FAM236DA0A1B0GTK5 79 aa8.62□□□□□ -1.03
SHPRH-211ENST00000629427 FAM236CP0DP71 79 aa8.62□□□□□ -1.03
SHPRH-211ENST00000629427 C10orf25Q5T742 122 aa8.62□□□□□ -1.03
SHPRH-211ENST00000629427 ATP5EP2Q5VTU8 51 aa8.62□□□□□ -1.03
SHPRH-211ENST00000629427 SMIM11BQ8TCY0 68 aa8.62□□□□□ -1.03
SHPRH-211ENST00000629427 Q6ZQY7 126 aa8.62□□□□□ -1.03
SHPRH-211ENST00000629427 TRBV30A0A0K0K1B3 111 aa8.62□□□□□ -1.03
SHPRH-211ENST00000629427 COX17Q14061 63 aa8.62□□□□□ -1.03
SHPRH-211ENST00000629427 WDR87Q6ZQQ6 2873 aa8.61□□□□□ -1.03
SHPRH-211ENST00000629427 PYGO1Q9Y3Y4 419 aa8.61□□□□□ -1.03
SHPRH-211ENST00000629427 U3KQK5 164 aa8.61□□□□□ -1.03
SHPRH-211ENST00000629427 PIEZO2Q9H5I5 2752 aa8.61□□□□□ -1.03
SHPRH-211ENST00000629427 MT-ATP8P03928 68 aa8.61□□□□□ -1.03
SHPRH-211ENST00000629427 MBD6Q96DN6 1003 aa8.61□□□□□ -1.03
SHPRH-211ENST00000629427 UQCRQO14949 82 aa8.6□□□□□ -1.03
SHPRH-211ENST00000629427 FAM30AQ9NZY2 134 aa8.6□□□□□ -1.03
SHPRH-211ENST00000629427 SNURFQ9Y675 71 aa8.6□□□□□ -1.03
SHPRH-211ENST00000629427 NRACQ8N912 160 aa8.6□□□□□ -1.03
SHPRH-211ENST00000629427 MRGPRG-AS1Q2M3A8 158 aa8.6□□□□□ -1.03
SHPRH-211ENST00000629427 MUC22E2RYF6 1773 aaPredicted RBP8.6□□□□□ -1.03
SHPRH-211ENST00000629427 ZNF295-AS1Q8N0V1 137 aa8.6□□□□□ -1.03
SHPRH-211ENST00000629427 NDUFC2-KCTD14E9PQ53 114 aa8.59□□□□□ -1.03
SHPRH-211ENST00000629427 PRR9Q5T870 116 aa8.59□□□□□ -1.03
SHPRH-211ENST00000629427 LRRK2Q5S007 2527 aa8.59□□□□□ -1.03
SHPRH-211ENST00000629427 IGLV5-52A0A0A0MRZ9 124 aa8.59□□□□□ -1.03
SHPRH-211ENST00000629427 Q6ZVQ6 151 aa8.59□□□□□ -1.03
SHPRH-211ENST00000629427 Q8N9L7 120 aa8.58□□□□□ -1.04
SHPRH-211ENST00000629427 TP73-AS1Q9UF72 201 aa8.58□□□□□ -1.04
SHPRH-211ENST00000629427 M0QXV9 152 aa8.58□□□□□ -1.04
SHPRH-211ENST00000629427 IGLV1-40P01703 118 aa8.58□□□□□ -1.04
SHPRH-211ENST00000629427 TIMM17BO60830 172 aa8.58□□□□□ -1.04
SHPRH-211ENST00000629427 IGLV2-11P01706 119 aa8.57□□□□□ -1.04
SHPRH-211ENST00000629427 CDSNQ15517 529 aa8.57□□□□□ -1.04
SHPRH-211ENST00000629427 CRIP3Q6Q6R5 217 aa8.57□□□□□ -1.04
SHPRH-211ENST00000629427 CYSRT1A8MQ03 144 aa8.57□□□□□ -1.04
SHPRH-211ENST00000629427 KLLNB2CW77 178 aa8.57□□□□□ -1.04
SHPRH-211ENST00000629427 Q8N6K4 173 aa8.57□□□□□ -1.04
SHPRH-211ENST00000629427 MRPS36P82909 103 aaKnown RBP8.57□□□□□ -1.04
SHPRH-211ENST00000629427 A0A0U1RQV1 116 aa8.56□□□□□ -1.04
SHPRH-211ENST00000629427 BRI3O95415 125 aa8.56□□□□□ -1.04
SHPRH-211ENST00000629427 PRR4Q16378 134 aa8.56□□□□□ -1.04
SHPRH-211ENST00000629427 FAM19A3Q7Z5A8 133 aa8.56□□□□□ -1.04
SHPRH-211ENST00000629427 RPL28P46779 137 aaKnown RBP8.56□□□□□ -1.04
SHPRH-211ENST00000629427 FAM240AA0A1B0GVK7 77 aa8.56□□□□□ -1.04
SHPRH-211ENST00000629427 ZNF73O43830 326 aaPredicted RBP8.56□□□□□ -1.04
SHPRH-211ENST00000629427 A6NED7 52 aa8.55□□□□□ -1.04
SHPRH-211ENST00000629427 MRPL55Q7Z7F7 128 aaKnown RBP8.55□□□□□ -1.04
SHPRH-211ENST00000629427 MRPS12O15235 138 aaKnown RBP8.55□□□□□ -1.04
SHPRH-211ENST00000629427 V9GYY9 64 aa8.55□□□□□ -1.04
SHPRH-211ENST00000629427 ZFYVE26Q68DK2 2539 aa8.55□□□□□ -1.04
SHPRH-211ENST00000629427 Q8IZM0 81 aa8.55□□□□□ -1.04
SHPRH-211ENST00000629427 CDC42SE2Q9NRR3 84 aa8.55□□□□□ -1.04
SHPRH-211ENST00000629427 EDN2P20800 178 aa8.54□□□□□ -1.04
SHPRH-211ENST00000629427 NDUFC1O43677 76 aa8.54□□□□□ -1.04
SHPRH-211ENST00000629427 C2CD3Q4AC94 2353 aa8.54□□□□□ -1.04
SHPRH-211ENST00000629427 REG3GQ6UW15 175 aa8.54□□□□□ -1.04
SHPRH-211ENST00000629427 PRO3102Q9H379 93 aa8.54□□□□□ -1.04
SHPRH-211ENST00000629427 NDUFA7O95182 113 aa8.54□□□□□ -1.04
SHPRH-211ENST00000629427 AVPP01185 164 aa8.53□□□□□ -1.04
SHPRH-211ENST00000629427 C11orf21Q9P2W6 132 aa8.53□□□□□ -1.04
SHPRH-211ENST00000629427 C9orf116Q5BN46 136 aaPredicted RBP8.53□□□□□ -1.04
SHPRH-211ENST00000629427 C6orf223Q8N319 242 aa8.53□□□□□ -1.04
SHPRH-211ENST00000629427 X6R8D5 127 aa8.53□□□□□ -1.04
SHPRH-211ENST00000629427 ESRGQ1W209 222 aa8.53□□□□□ -1.04
SHPRH-211ENST00000629427 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.52□□□□□ -1.05
SHPRH-211ENST00000629427 KRTAP10-9P60411 292 aa8.52□□□□□ -1.05
SHPRH-211ENST00000629427 RETNLBQ9BQ08 111 aa8.52□□□□□ -1.05
SHPRH-211ENST00000629427 UNQ6190/PRO20217Q6UXQ8 127 aa8.52□□□□□ -1.05
SHPRH-211ENST00000629427 POM121L12Q8N7R1 296 aa8.52□□□□□ -1.05
SHPRH-211ENST00000629427 COL27A1Q8IZC6 1860 aaPredicted RBP8.51□□□□□ -1.05
SHPRH-211ENST00000629427 CRIP2P52943 208 aaPredicted RBP8.51□□□□□ -1.05
SHPRH-211ENST00000629427 ATP5EP56381 51 aaPredicted RBP8.51□□□□□ -1.05
SHPRH-211ENST00000629427 LINC01556Q5JQF7 62 aa8.51□□□□□ -1.05
SHPRH-211ENST00000629427 Q6ZTC4 211 aa8.5□□□□□ -1.05
SHPRH-211ENST00000629427 GAS8-AS1O95177 125 aa8.5□□□□□ -1.05
SHPRH-211ENST00000629427 POLR2KP53803 58 aaKnown RBP8.5□□□□□ -1.05
SHPRH-211ENST00000629427 LST1O00453 97 aa8.49□□□□□ -1.05
SHPRH-211ENST00000629427 FSHBP01225 129 aa8.49□□□□□ -1.05
SHPRH-211ENST00000629427 C1orf137Q5JT78 98 aa8.49□□□□□ -1.05
SHPRH-211ENST00000629427 PRYO14603 147 aa8.49□□□□□ -1.05
SHPRH-211ENST00000629427 COX6A2Q02221 97 aa8.49□□□□□ -1.05
SHPRH-211ENST00000629427 SERP2Q8N6R1 65 aa8.48□□□□□ -1.05
SHPRH-211ENST00000629427 CELA1Q9UNI1 258 aa8.48□□□□□ -1.05
SHPRH-211ENST00000629427 PRR3P79522 188 aaKnown RBP8.48□□□□□ -1.05
SHPRH-211ENST00000629427 IGHV6-1A0A0B4J1U7 121 aa8.48□□□□□ -1.05
SHPRH-211ENST00000629427 EP400Q96L91 3159 aa8.47□□□□□ -1.05
SHPRH-211ENST00000629427 ODF3L2Q3SX64 289 aa8.47□□□□□ -1.05
SHPRH-211ENST00000629427 MUC7Q8TAX7 377 aa8.47□□□□□ -1.05
SHPRH-211ENST00000629427 C1orf134Q5TEV5 83 aa8.47□□□□□ -1.05
SHPRH-211ENST00000629427 IGLV1-51P01701 117 aa8.46□□□□□ -1.05
SHPRH-211ENST00000629427 FN1P02751 2386 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms