RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 TMEM241Q24JQ0 296 aa11.51□□□□□ -0.57
SMN1-211ENST00000625245 GAGE2EQ4V326 116 aa11.51□□□□□ -0.57
SMN1-211ENST00000625245 UNQ6190/PRO20217Q6UXQ8 127 aa11.51□□□□□ -0.57
SMN1-211ENST00000625245 FAM19A5Q7Z5A7 132 aaPredicted RBP11.51□□□□□ -0.57
SMN1-211ENST00000625245 AKAP14Q86UN6 197 aa11.51□□□□□ -0.57
SMN1-211ENST00000625245 GAGE2DQ9UEU5 116 aa11.51□□□□□ -0.57
SMN1-211ENST00000625245 IGHV3OR16-9A0A0B4J2B5 98 aa11.5□□□□□ -0.57
SMN1-211ENST00000625245 KRTAP11-1Q8IUC1 163 aa11.5□□□□□ -0.57
SMN1-211ENST00000625245 TRBV24-1A0A075B6N3 115 aa11.49□□□□□ -0.57
SMN1-211ENST00000625245 IFITM10A6NMD0 228 aa11.49□□□□□ -0.57
SMN1-211ENST00000625245 H0Y9J4 135 aa11.49□□□□□ -0.57
SMN1-211ENST00000625245 TCAPO15273 167 aa11.49□□□□□ -0.57
SMN1-211ENST00000625245 TNFRSF6BO95407 300 aa11.49□□□□□ -0.57
SMN1-211ENST00000625245 RPL23P62829 140 aaKnown RBP11.49□□□□□ -0.57
SMN1-211ENST00000625245 HBBP68871 147 aa11.49□□□□□ -0.57
SMN1-211ENST00000625245 ADIRFQ15847 76 aa11.49□□□□□ -0.57
SMN1-211ENST00000625245 FAM74A3Q4VXF1 159 aa11.49□□□□□ -0.57
SMN1-211ENST00000625245 FAM104AQ969W3 186 aa11.49□□□□□ -0.57
SMN1-211ENST00000625245 SPANXA1Q9NS26 97 aa11.49□□□□□ -0.57
SMN1-211ENST00000625245 C6orf48Q9UBA6 75 aa11.49□□□□□ -0.57
SMN1-211ENST00000625245 RPL32P62910 135 aaKnown RBP11.48□□□□□ -0.57
SMN1-211ENST00000625245 SMIM2Q9BVW6 85 aa11.48□□□□□ -0.57
SMN1-211ENST00000625245 TLX1NBP0CAT3 122 aa11.47□□□□□ -0.57
SMN1-211ENST00000625245 SMIM27A0A1W2PRY6 76 aa11.46□□□□□ -0.57
SMN1-211ENST00000625245 D6R8Y8 96 aa11.46□□□□□ -0.57
SMN1-211ENST00000625245 UBE2BP63146 152 aa11.46□□□□□ -0.57
SMN1-211ENST00000625245 MRPS36P82909 103 aaKnown RBP11.46□□□□□ -0.57
SMN1-211ENST00000625245 hCG_2014768A0A024R1R8 64 aa11.45□□□□□ -0.58
SMN1-211ENST00000625245 TGIF2-C20orf24A0A0A6YYL0 155 aa11.45□□□□□ -0.58
SMN1-211ENST00000625245 A0A1B0GW15 77 aa11.45□□□□□ -0.58
SMN1-211ENST00000625245 SMDT1Q9H4I9 107 aa11.45□□□□□ -0.58
SMN1-211ENST00000625245 IGLV1-50A0A075B6I6 118 aa11.44□□□□□ -0.58
SMN1-211ENST00000625245 M0QXV9 152 aa11.44□□□□□ -0.58
SMN1-211ENST00000625245 NPYP01303 97 aa11.44□□□□□ -0.58
SMN1-211ENST00000625245 MRPL54Q6P161 138 aaKnown RBP11.44□□□□□ -0.58
SMN1-211ENST00000625245 NAT8Q9UHE5 227 aa11.44□□□□□ -0.58
SMN1-211ENST00000625245 F8W036 122 aa11.42□□□□□ -0.58
SMN1-211ENST00000625245 UBE2D1P51668 147 aa11.42□□□□□ -0.58
SMN1-211ENST00000625245 KRTAP7-1Q8IUC3 87 aa11.42□□□□□ -0.58
SMN1-211ENST00000625245 S100A8P05109 93 aa11.41□□□□□ -0.58
SMN1-211ENST00000625245 KRTAP1-4P0C5Y4 121 aa11.41□□□□□ -0.58
SMN1-211ENST00000625245 RAB5AP20339 215 aa11.41□□□□□ -0.58
SMN1-211ENST00000625245 IFI27P40305 119 aaPredicted RBP11.41□□□□□ -0.58
SMN1-211ENST00000625245 KIAA0087Q14695 138 aa11.41□□□□□ -0.58
SMN1-211ENST00000625245 C9JQL5 133 aa11.4□□□□□ -0.58
SMN1-211ENST00000625245 PRR4Q16378 134 aa11.4□□□□□ -0.58
SMN1-211ENST00000625245 C2orf82Q6UX34 121 aa11.4□□□□□ -0.58
SMN1-211ENST00000625245 PACRGQ96M98 296 aaPredicted RBP11.4□□□□□ -0.58
SMN1-211ENST00000625245 TRBV30A0A0K0K1B3 111 aa11.39□□□□□ -0.59
SMN1-211ENST00000625245 LINC00242Q5T6M2 205 aa11.39□□□□□ -0.59
SMN1-211ENST00000625245 PPBPP02775 128 aa11.38□□□□□ -0.59
SMN1-211ENST00000625245 IGLV4-3A0A075B6K6 122 aa11.37□□□□□ -0.59
SMN1-211ENST00000625245 NDUFC2-KCTD14E9PQ53 114 aa11.37□□□□□ -0.59
SMN1-211ENST00000625245 C9orf129Q5T035 196 aaKnown RBP11.37□□□□□ -0.59
SMN1-211ENST00000625245 TMEM136Q6ZRR5 245 aa11.37□□□□□ -0.59
SMN1-211ENST00000625245 ORMDL3Q8N138 153 aa11.37□□□□□ -0.59
SMN1-211ENST00000625245 A0A1B0GXF2 115 aa11.36□□□□□ -0.59
SMN1-211ENST00000625245 RPL13AP40429 203 aaKnown RBP11.36□□□□□ -0.59
SMN1-211ENST00000625245 SRSF3P84103 164 aaKnown RBP11.36□□□□□ -0.59
SMN1-211ENST00000625245 TMEM141Q96I45 108 aa11.36□□□□□ -0.59
SMN1-211ENST00000625245 PRELID3AQ96N28 172 aa11.36□□□□□ -0.59
SMN1-211ENST00000625245 PYGO1Q9Y3Y4 419 aa11.36□□□□□ -0.59
SMN1-211ENST00000625245 PEA15Q15121 130 aa11.35□□□□□ -0.59
SMN1-211ENST00000625245 LOC389332A0A1B0GUA5 103 aa11.34□□□□□ -0.59
SMN1-211ENST00000625245 TEX43Q6ZNM6 134 aa11.34□□□□□ -0.59
SMN1-211ENST00000625245 PRSS2P07478 247 aa11.33□□□□□ -0.6
SMN1-211ENST00000625245 ZC2HC1BQ5TFG8 222 aa11.33□□□□□ -0.6
SMN1-211ENST00000625245 LINC00469Q8N7U9 141 aa11.33□□□□□ -0.6
SMN1-211ENST00000625245 C2orf88Q9BSF0 95 aa11.33□□□□□ -0.6
SMN1-211ENST00000625245 TOMM7Q9P0U1 55 aa11.33□□□□□ -0.6
SMN1-211ENST00000625245 ZNF861PO60384 105 aa11.31□□□□□ -0.6
SMN1-211ENST00000625245 CKS1BP61024 79 aa11.31□□□□□ -0.6
SMN1-211ENST00000625245 LINC01561Q8N1V8 128 aa11.31□□□□□ -0.6
SMN1-211ENST00000625245 CARHSP1Q9Y2V2 147 aaKnown RBP11.31□□□□□ -0.6
SMN1-211ENST00000625245 C6orf226Q5I0X4 101 aa11.3□□□□□ -0.6
SMN1-211ENST00000625245 Q6ZN92 141 aa11.3□□□□□ -0.6
SMN1-211ENST00000625245 C22orf24Q9Y442 160 aa11.3□□□□□ -0.6
SMN1-211ENST00000625245 TSPAN13O95857 204 aa11.29□□□□□ -0.6
SMN1-211ENST00000625245 ATP5L2Q7Z4Y8 100 aa11.29□□□□□ -0.6
SMN1-211ENST00000625245 VCX2Q9H322 139 aa11.29□□□□□ -0.6
SMN1-211ENST00000625245 MAP1LC3AQ9H492 121 aa11.29□□□□□ -0.6
SMN1-211ENST00000625245 XAGE1AQ9HD64 81 aa11.29□□□□□ -0.6
SMN1-211ENST00000625245 CYSLTR1Q9Y271 337 aa11.29□□□□□ -0.6
SMN1-211ENST00000625245 C2orf66Q6UXQ4 117 aa11.28□□□□□ -0.6
SMN1-211ENST00000625245 PRSS47A8MTI9 375 aa11.27□□□□□ -0.61
SMN1-211ENST00000625245 NUPR1O60356 82 aa11.27□□□□□ -0.61
SMN1-211ENST00000625245 LBHQ53QV2 105 aaPredicted RBP11.27□□□□□ -0.61
SMN1-211ENST00000625245 LINC00173Q6ZV60 143 aa11.27□□□□□ -0.61
SMN1-211ENST00000625245 ALKBH7Q9BT30 221 aaPredicted RBP11.27□□□□□ -0.61
SMN1-211ENST00000625245 CTDSP1Q9GZU7 261 aa11.27□□□□□ -0.61
SMN1-211ENST00000625245 Q8N8P6 123 aa11.26□□□□□ -0.61
SMN1-211ENST00000625245 AMELXQ99217 191 aa11.26□□□□□ -0.61
SMN1-211ENST00000625245 LAMTOR2Q9Y2Q5 125 aa11.25□□□□□ -0.61
SMN1-211ENST00000625245 Q8IZM0 81 aa11.24□□□□□ -0.61
SMN1-211ENST00000625245 ORMDL2Q53FV1 153 aa11.23□□□□□ -0.61
SMN1-211ENST00000625245 MUC2Q02817 5179 aa11.22□□□□□ -0.61
SMN1-211ENST00000625245 A0A0U1RQV1 116 aa11.21□□□□□ -0.61
SMN1-211ENST00000625245 IGIPA6NJ69 53 aa11.21□□□□□ -0.61
SMN1-211ENST00000625245 RPL28P46779 137 aaKnown RBP11.21□□□□□ -0.61
SMN1-211ENST00000625245 MRPL55Q7Z7F7 128 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 192.6 ms