RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 SDIM1Q6ZPB5 146 aa6.72□□□□□ -1.33
GGA3-222ENST00000621217 RNF152Q8N8N0 203 aa6.72□□□□□ -1.33
GGA3-222ENST00000621217 VSIG2Q96IQ7 327 aa6.72□□□□□ -1.33
GGA3-222ENST00000621217 CUBNO60494 3623 aa6.72□□□□□ -1.33
GGA3-222ENST00000621217 APCP25054 2843 aa6.72□□□□□ -1.33
GGA3-222ENST00000621217 IGLV1-40P01703 118 aa6.72□□□□□ -1.33
GGA3-222ENST00000621217 DAZ2Q13117 558 aaKnown RBP6.72□□□□□ -1.33
GGA3-222ENST00000621217 HRCT1Q6UXD1 115 aa6.72□□□□□ -1.33
GGA3-222ENST00000621217 DAZ4Q86SG3 579 aaKnown RBP6.72□□□□□ -1.33
GGA3-222ENST00000621217 DAND5Q8N907 189 aa6.72□□□□□ -1.33
GGA3-222ENST00000621217 DAZ3Q9NR90 486 aaKnown RBP6.72□□□□□ -1.33
GGA3-222ENST00000621217 TRAV23DV6A0A075B6W5 121 aa6.72□□□□□ -1.33
GGA3-222ENST00000621217 COX7A2LO14548 114 aa6.72□□□□□ -1.33
GGA3-222ENST00000621217 TRIAP1O43715 76 aa6.72□□□□□ -1.33
GGA3-222ENST00000621217 SS18Q15532 418 aa6.72□□□□□ -1.33
GGA3-222ENST00000621217 SND1-IT1Q9HBX3 110 aa6.72□□□□□ -1.33
GGA3-222ENST00000621217 NXPH4O95158 308 aa6.72□□□□□ -1.33
GGA3-222ENST00000621217 IGHV3-30-3P0DP02 117 aa6.72□□□□□ -1.33
GGA3-222ENST00000621217 FAM19A5Q7Z5A7 132 aaPredicted RBP6.72□□□□□ -1.33
GGA3-222ENST00000621217 CNFNQ9BYD5 112 aa6.72□□□□□ -1.33
GGA3-222ENST00000621217 A0A0J9YXY3 114 aa6.71□□□□□ -1.33
GGA3-222ENST00000621217 MIAQ16674 131 aa6.71□□□□□ -1.33
GGA3-222ENST00000621217 COX8CQ7Z4L0 72 aa6.71□□□□□ -1.33
GGA3-222ENST00000621217 LINC00482Q8N8I6 264 aa6.71□□□□□ -1.33
GGA3-222ENST00000621217 IGHV1-58A0A0C4DH39 117 aa6.71□□□□□ -1.34
GGA3-222ENST00000621217 K7EQG2 157 aa6.71□□□□□ -1.34
GGA3-222ENST00000621217 RPL18AQ02543 176 aaKnown RBP6.71□□□□□ -1.34
GGA3-222ENST00000621217 MRPL55Q7Z7F7 128 aaKnown RBP6.71□□□□□ -1.34
GGA3-222ENST00000621217 C4orf3Q8WVX3 66 aa6.71□□□□□ -1.34
GGA3-222ENST00000621217 MAP6D1Q9H9H5 199 aa6.71□□□□□ -1.34
GGA3-222ENST00000621217 NDUFC2-KCTD14E9PQ53 114 aa6.71□□□□□ -1.34
GGA3-222ENST00000621217 LECT2O14960 151 aa6.71□□□□□ -1.34
GGA3-222ENST00000621217 CSDC2Q9Y534 153 aaKnown RBP6.71□□□□□ -1.34
GGA3-222ENST00000621217 FAM240AA0A1B0GVK7 77 aa6.7□□□□□ -1.34
GGA3-222ENST00000621217 DEFB135Q30KP9 77 aa6.7□□□□□ -1.34
GGA3-222ENST00000621217 CLPSL2Q6UWE3 100 aa6.7□□□□□ -1.34
GGA3-222ENST00000621217 LINC00526Q96FQ7 95 aa6.7□□□□□ -1.34
GGA3-222ENST00000621217 DEFB114Q30KQ6 69 aa6.7□□□□□ -1.34
GGA3-222ENST00000621217 C1orf195Q5TG92 126 aa6.7□□□□□ -1.34
GGA3-222ENST00000621217 DCANP1Q8TF63 244 aa6.7□□□□□ -1.34
GGA3-222ENST00000621217 PSMG3-AS1Q96PY0 264 aa6.7□□□□□ -1.34
GGA3-222ENST00000621217 PPDPFQ9H3Y8 114 aa6.7□□□□□ -1.34
GGA3-222ENST00000621217 C14orf132Q9NPU4 83 aa6.7□□□□□ -1.34
GGA3-222ENST00000621217 BAHCC1Q9P281 2608 aa6.7□□□□□ -1.34
GGA3-222ENST00000621217 CDIP1Q9H305 208 aa6.7□□□□□ -1.34
GGA3-222ENST00000621217 HHLA3Q9XRX5 114 aa6.7□□□□□ -1.34
GGA3-222ENST00000621217 MED14OSP0DP75 135 aa6.69□□□□□ -1.34
GGA3-222ENST00000621217 USP17L23D6RBM5 183 aa6.69□□□□□ -1.34
GGA3-222ENST00000621217 IGHV3-30P01768 117 aa6.69□□□□□ -1.34
GGA3-222ENST00000621217 IGHV3-30-5P0DP03 117 aa6.69□□□□□ -1.34
GGA3-222ENST00000621217 A8MZ25 164 aa6.69□□□□□ -1.34
GGA3-222ENST00000621217 Q9HAA7 133 aa6.69□□□□□ -1.34
GGA3-222ENST00000621217 C20orf203Q8NBC4 194 aa6.68□□□□□ -1.34
GGA3-222ENST00000621217 SPENQ96T58 3664 aaKnown RBP6.68□□□□□ -1.34
GGA3-222ENST00000621217 NIPBLQ6KC79 2804 aaeCLIP6.68□□□□□ -1.34
GGA3-222ENST00000621217 CXCL5P42830 114 aa6.68□□□□□ -1.34
GGA3-222ENST00000621217 NFE4Q86UQ8 179 aa6.68□□□□□ -1.34
GGA3-222ENST00000621217 ATP5EP2Q5VTU8 51 aa6.68□□□□□ -1.34
GGA3-222ENST00000621217 TRAV25A0A0B4J276 109 aa6.67□□□□□ -1.34
GGA3-222ENST00000621217 UBE2D1P51668 147 aa6.67□□□□□ -1.34
GGA3-222ENST00000621217 MPLKIPQ8TAP9 179 aa6.67□□□□□ -1.34
GGA3-222ENST00000621217 LST1O00453 97 aa6.67□□□□□ -1.34
GGA3-222ENST00000621217 UBE2D3P61077 147 aa6.67□□□□□ -1.34
GGA3-222ENST00000621217 UBE2D2P62837 147 aa6.67□□□□□ -1.34
GGA3-222ENST00000621217 PRB2P02812 416 aaPredicted RBP6.66□□□□□ -1.34
GGA3-222ENST00000621217 DAD1P61803 113 aa6.66□□□□□ -1.34
GGA3-222ENST00000621217 Q6ZTI0 123 aa6.66□□□□□ -1.34
GGA3-222ENST00000621217 UPK3BQ9BT76 320 aa6.66□□□□□ -1.34
GGA3-222ENST00000621217 KLLNB2CW77 178 aa6.66□□□□□ -1.34
GGA3-222ENST00000621217 SMIM26A0A096LP01 95 aa6.66□□□□□ -1.34
GGA3-222ENST00000621217 M0QY20 66 aa6.66□□□□□ -1.34
GGA3-222ENST00000621217 F8WEM9 126 aa6.65□□□□□ -1.34
GGA3-222ENST00000621217 IGHV4-4A0A075B6R2 117 aa6.65□□□□□ -1.34
GGA3-222ENST00000621217 LOC107984640A0A0U1RRK4 108 aa6.65□□□□□ -1.34
GGA3-222ENST00000621217 TMEM89A2RUT3 159 aa6.65□□□□□ -1.34
GGA3-222ENST00000621217 TMEM256-PLSCR3K7ERE1 68 aa6.65□□□□□ -1.35
GGA3-222ENST00000621217 ZNF22P17026 224 aaPredicted RBP6.65□□□□□ -1.35
GGA3-222ENST00000621217 ZMAT4Q9H898 229 aa6.65□□□□□ -1.35
GGA3-222ENST00000621217 IGLV2-18A0A075B6J9 118 aa6.65□□□□□ -1.35
GGA3-222ENST00000621217 H7C423 109 aa6.65□□□□□ -1.35
GGA3-222ENST00000621217 CRYGDP07320 174 aa6.65□□□□□ -1.35
GGA3-222ENST00000621217 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.65□□□□□ -1.35
GGA3-222ENST00000621217 COX7B2Q8TF08 81 aa6.65□□□□□ -1.35
GGA3-222ENST00000621217 ZNF580Q9UK33 172 aa6.65□□□□□ -1.35
GGA3-222ENST00000621217 TMEM223A0PJW6 202 aa6.64□□□□□ -1.35
GGA3-222ENST00000621217 CMC4P56277 68 aaPredicted RBP6.64□□□□□ -1.35
GGA3-222ENST00000621217 HILS1P60008 231 aa6.64□□□□□ -1.35
GGA3-222ENST00000621217 NDUFC1O43677 76 aa6.64□□□□□ -1.35
GGA3-222ENST00000621217 ATP5EP56381 51 aaPredicted RBP6.64□□□□□ -1.35
GGA3-222ENST00000621217 Q9UF83 564 aa6.64□□□□□ -1.35
GGA3-222ENST00000621217 PDE6GP18545 87 aa6.63□□□□□ -1.35
GGA3-222ENST00000621217 WFDC9Q8NEX5 89 aa6.63□□□□□ -1.35
GGA3-222ENST00000621217 TMEM263Q8WUH6 116 aaKnown RBP6.63□□□□□ -1.35
GGA3-222ENST00000621217 POLR2KP53803 58 aaKnown RBP6.63□□□□□ -1.35
GGA3-222ENST00000621217 OXLD1Q5BKU9 147 aa6.63□□□□□ -1.35
GGA3-222ENST00000621217 LINC00467Q9BRT7 94 aa6.63□□□□□ -1.35
GGA3-222ENST00000621217 KLK5Q9Y337 293 aaPredicted RBP6.63□□□□□ -1.35
GGA3-222ENST00000621217 H3BQ85 93 aa6.62□□□□□ -1.35
GGA3-222ENST00000621217 ENHOQ6UWT2 76 aa6.62□□□□□ -1.35
GGA3-222ENST00000621217 C5orf38Q86SI9 138 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms