RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 WFDC13Q8IUB5 93 aa13.73□□□□□ -0.21
SPAST-203ENST00000615843 A0A087WYN8 130 aa13.72□□□□□ -0.21
SPAST-203ENST00000615843 M0R378 163 aa13.72□□□□□ -0.21
SPAST-203ENST00000615843 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.72□□□□□ -0.21
SPAST-203ENST00000615843 Q8IZM0 81 aa13.72□□□□□ -0.21
SPAST-203ENST00000615843 C19orf84I3L1E1 186 aa13.72□□□□□ -0.21
SPAST-203ENST00000615843 ZNF73O43830 326 aaPredicted RBP13.71□□□□□ -0.21
SPAST-203ENST00000615843 IGLV1-40P01703 118 aa13.71□□□□□ -0.21
SPAST-203ENST00000615843 SYCNQ0VAF6 134 aa13.71□□□□□ -0.21
SPAST-203ENST00000615843 IGKV2-28A0A075B6P5 120 aa13.71□□□□□ -0.21
SPAST-203ENST00000615843 LOC107984640A0A0U1RRK4 108 aa13.71□□□□□ -0.21
SPAST-203ENST00000615843 IGKV2D-28P01615 120 aa13.71□□□□□ -0.21
SPAST-203ENST00000615843 CHCHD7Q9BUK0 85 aa13.7□□□□□ -0.22
SPAST-203ENST00000615843 Q8N814 137 aa13.7□□□□□ -0.22
SPAST-203ENST00000615843 AMELXQ99217 191 aa13.7□□□□□ -0.22
SPAST-203ENST00000615843 FAM30AQ9NZY2 134 aa13.7□□□□□ -0.22
SPAST-203ENST00000615843 CACNA1AO00555 2505 aa13.7□□□□□ -0.22
SPAST-203ENST00000615843 SOSTDC1Q6X4U4 206 aa13.69□□□□□ -0.22
SPAST-203ENST00000615843 CSDC2Q9Y534 153 aaKnown RBP13.69□□□□□ -0.22
SPAST-203ENST00000615843 COX6A2Q02221 97 aa13.69□□□□□ -0.22
SPAST-203ENST00000615843 DHRS4-AS1Q9P1J3 65 aa13.68□□□□□ -0.22
SPAST-203ENST00000615843 HIVEP2P31629 2446 aa13.68□□□□□ -0.22
SPAST-203ENST00000615843 MRGPRG-AS1Q2M3A8 158 aa13.67□□□□□ -0.22
SPAST-203ENST00000615843 A0A0J9YWU9 116 aa13.67□□□□□ -0.22
SPAST-203ENST00000615843 MUC6Q6W4X9 2439 aa13.67□□□□□ -0.22
SPAST-203ENST00000615843 TRBV7-7A0A0K0K1E9 115 aa13.67□□□□□ -0.22
SPAST-203ENST00000615843 IGHV4-31P0DP07 118 aa13.67□□□□□ -0.22
SPAST-203ENST00000615843 NOTCH2Q04721 2471 aa13.67□□□□□ -0.22
SPAST-203ENST00000615843 C10orf142B7Z368 130 aa13.67□□□□□ -0.22
SPAST-203ENST00000615843 CELA1Q9UNI1 258 aa13.67□□□□□ -0.22
SPAST-203ENST00000615843 C11orf45Q8TAV5 145 aa13.66□□□□□ -0.22
SPAST-203ENST00000615843 PPDPFQ9H3Y8 114 aa13.66□□□□□ -0.22
SPAST-203ENST00000615843 MUC7Q8TAX7 377 aa13.65□□□□□ -0.22
SPAST-203ENST00000615843 SONP18583 2426 aaKnown RBP13.65□□□□□ -0.22
SPAST-203ENST00000615843 ZNF702PQ9H963 129 aa13.65□□□□□ -0.22
SPAST-203ENST00000615843 DSCAMO60469 2012 aa13.64□□□□□ -0.23
SPAST-203ENST00000615843 CASC2Q6XLA1 102 aa13.64□□□□□ -0.23
SPAST-203ENST00000615843 LRCOL1A6NCL2 159 aa13.63□□□□□ -0.23
SPAST-203ENST00000615843 EDN2P20800 178 aa13.63□□□□□ -0.23
SPAST-203ENST00000615843 CUL9Q8IWT3 2517 aa13.63□□□□□ -0.23
SPAST-203ENST00000615843 C14orf177Q52M58 125 aa13.63□□□□□ -0.23
SPAST-203ENST00000615843 SMCPP49901 116 aaPredicted RBP13.63□□□□□ -0.23
SPAST-203ENST00000615843 LINC00482Q8N8I6 264 aa13.63□□□□□ -0.23
SPAST-203ENST00000615843 C4orf48Q5BLP8 95 aa13.63□□□□□ -0.23
SPAST-203ENST00000615843 Q8N3U1 123 aa13.62□□□□□ -0.23
SPAST-203ENST00000615843 SRCAPQ6ZRS2 3230 aa13.62□□□□□ -0.23
SPAST-203ENST00000615843 C18orf65Q6ZTR6 163 aa13.62□□□□□ -0.23
SPAST-203ENST00000615843 PRORYQ9H606 182 aa13.61□□□□□ -0.23
SPAST-203ENST00000615843 PRR15LQ9BU68 103 aa13.61□□□□□ -0.23
SPAST-203ENST00000615843 WFDC10AQ9H1F0 79 aa13.61□□□□□ -0.23
SPAST-203ENST00000615843 LINC00846Q9NV44 126 aa13.61□□□□□ -0.23
SPAST-203ENST00000615843 PRYO14603 147 aa13.61□□□□□ -0.23
SPAST-203ENST00000615843 A0A087WZ39 114 aa13.6□□□□□ -0.23
SPAST-203ENST00000615843 CYSRT1A8MQ03 144 aa13.6□□□□□ -0.23
SPAST-203ENST00000615843 PRO0461Q9UI25 63 aa13.6□□□□□ -0.23
SPAST-203ENST00000615843 LELP1Q5T871 98 aa13.6□□□□□ -0.23
SPAST-203ENST00000615843 DEFB131BA0A096LNP1 70 aa13.59□□□□□ -0.23
SPAST-203ENST00000615843 SHISA2Q6UWI4 295 aa13.59□□□□□ -0.23
SPAST-203ENST00000615843 LINC01546A6NGU7 62 aa13.59□□□□□ -0.23
SPAST-203ENST00000615843 PRR3P79522 188 aaKnown RBP13.59□□□□□ -0.23
SPAST-203ENST00000615843 UNQ6190/PRO20217Q6UXQ8 127 aa13.57□□□□□ -0.24
SPAST-203ENST00000615843 Q8N9L7 120 aa13.57□□□□□ -0.24
SPAST-203ENST00000615843 PMAIP1Q13794 54 aa13.57□□□□□ -0.24
SPAST-203ENST00000615843 ZNF843Q8N446 348 aa13.57□□□□□ -0.24
SPAST-203ENST00000615843 C9orf116Q5BN46 136 aaPredicted RBP13.56□□□□□ -0.24
SPAST-203ENST00000615843 CPAMD8Q8IZJ3 1885 aa13.56□□□□□ -0.24
SPAST-203ENST00000615843 TRBV10-3A0A0K0K1G6 114 aa13.56□□□□□ -0.24
SPAST-203ENST00000615843 MYO18BQ8IUG5 2567 aa13.55□□□□□ -0.24
SPAST-203ENST00000615843 PTPRSQ13332 1948 aa13.55□□□□□ -0.24
SPAST-203ENST00000615843 RPL37AP8A6NKH3 93 aa13.55□□□□□ -0.24
SPAST-203ENST00000615843 IGLV4-60A0A075B6I1 120 aa13.55□□□□□ -0.24
SPAST-203ENST00000615843 AGRNO00468 2067 aa13.54□□□□□ -0.24
SPAST-203ENST00000615843 HILS1P60008 231 aa13.53□□□□□ -0.24
SPAST-203ENST00000615843 ODF3L2Q3SX64 289 aa13.52□□□□□ -0.24
SPAST-203ENST00000615843 MYO9AB2RTY4 2548 aa13.52□□□□□ -0.25
SPAST-203ENST00000615843 OTOGLQ3ZCN5 2332 aa13.52□□□□□ -0.25
SPAST-203ENST00000615843 KIR2DL5BQ8NHK3 375 aa13.52□□□□□ -0.25
SPAST-203ENST00000615843 LINC00208Q96KT6 92 aa13.51□□□□□ -0.25
SPAST-203ENST00000615843 Q6ZSN1 163 aa13.51□□□□□ -0.25
SPAST-203ENST00000615843 TMEM254Q8TBM7 123 aa13.51□□□□□ -0.25
SPAST-203ENST00000615843 Q6ZVQ6 151 aa13.5□□□□□ -0.25
SPAST-203ENST00000615843 KIF25-AS1Q9Y6Z4 181 aa13.5□□□□□ -0.25
SPAST-203ENST00000615843 LINC00337Q8N6G1 96 aa13.5□□□□□ -0.25
SPAST-203ENST00000615843 CRYGAP11844 174 aa13.5□□□□□ -0.25
SPAST-203ENST00000615843 NANOS2P60321 138 aaKnown RBP13.49□□□□□ -0.25
SPAST-203ENST00000615843 NAV2Q8IVL1 2488 aa13.49□□□□□ -0.25
SPAST-203ENST00000615843 C1orf137Q5JT78 98 aa13.49□□□□□ -0.25
SPAST-203ENST00000615843 KPRPQ5T749 579 aaPredicted RBP13.49□□□□□ -0.25
SPAST-203ENST00000615843 TRBV7-6A0A0J9YX20 115 aa13.48□□□□□ -0.25
SPAST-203ENST00000615843 LRP4O75096 1905 aa13.48□□□□□ -0.25
SPAST-203ENST00000615843 K7ERS5 55 aa13.48□□□□□ -0.25
SPAST-203ENST00000615843 HIVEP3Q5T1R4 2406 aa13.48□□□□□ -0.25
SPAST-203ENST00000615843 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.48□□□□□ -0.25
SPAST-203ENST00000615843 PSPHP1O15172 72 aa13.47□□□□□ -0.25
SPAST-203ENST00000615843 LINC01547P58512 204 aaPredicted RBP13.47□□□□□ -0.25
SPAST-203ENST00000615843 EGFEM1PQ0D2K5 195 aa13.47□□□□□ -0.25
SPAST-203ENST00000615843 BEAN1Q3B7T3 259 aa13.47□□□□□ -0.25
SPAST-203ENST00000615843 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.47□□□□□ -0.25
SPAST-203ENST00000615843 CEP192Q8TEP8 1941 aa13.46□□□□□ -0.25
SPAST-203ENST00000615843 PRO0628Q9UI54 55 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms