RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 A0A1W2PPR1 153 aa10.58□□□□□ -0.72
VPS36-207ENST00000611132 FHL3Q13643 280 aa10.58□□□□□ -0.72
VPS36-207ENST00000611132 DEFB113Q30KQ7 82 aa10.58□□□□□ -0.72
VPS36-207ENST00000611132 LAMA2P24043 3122 aaKnown RBP10.58□□□□□ -0.72
VPS36-207ENST00000611132 COX7BP24311 80 aa10.57□□□□□ -0.72
VPS36-207ENST00000611132 Q6ZSN1 163 aa10.57□□□□□ -0.72
VPS36-207ENST00000611132 ZNF702PQ9H963 129 aa10.57□□□□□ -0.72
VPS36-207ENST00000611132 HIGD2BQ4VC39 106 aa10.56□□□□□ -0.72
VPS36-207ENST00000611132 CHCHD10Q8WYQ3 142 aaPredicted RBP10.56□□□□□ -0.72
VPS36-207ENST00000611132 KLK12Q9UKR0 248 aa10.56□□□□□ -0.72
VPS36-207ENST00000611132 LOC100131303A0A0U1RQF7 123 aa10.56□□□□□ -0.72
VPS36-207ENST00000611132 CSDC2Q9Y534 153 aaKnown RBP10.56□□□□□ -0.72
VPS36-207ENST00000611132 HIVEP2P31629 2446 aa10.56□□□□□ -0.72
VPS36-207ENST00000611132 FAM19A5Q7Z5A7 132 aaPredicted RBP10.56□□□□□ -0.72
VPS36-207ENST00000611132 A0A087WYN8 130 aa10.56□□□□□ -0.72
VPS36-207ENST00000611132 CCKP06307 115 aa10.55□□□□□ -0.72
VPS36-207ENST00000611132 REG3AQ06141 175 aa10.55□□□□□ -0.72
VPS36-207ENST00000611132 PPDPFQ9H3Y8 114 aa10.55□□□□□ -0.72
VPS36-207ENST00000611132 IGHV4-28A0A0C4DH34 117 aa10.55□□□□□ -0.72
VPS36-207ENST00000611132 C18orf65Q6ZTR6 163 aa10.55□□□□□ -0.72
VPS36-207ENST00000611132 MKI67P46013 3256 aaKnown RBP10.55□□□□□ -0.72
VPS36-207ENST00000611132 WFDC9Q8NEX5 89 aa10.55□□□□□ -0.72
VPS36-207ENST00000611132 LINC00959A0A1B0GUT2 108 aa10.54□□□□□ -0.72
VPS36-207ENST00000611132 AVPP01185 164 aa10.54□□□□□ -0.72
VPS36-207ENST00000611132 BRCA2P51587 3418 aa10.54□□□□□ -0.72
VPS36-207ENST00000611132 LOC107984640A0A0U1RRK4 108 aa10.54□□□□□ -0.72
VPS36-207ENST00000611132 SPART-AS1P0CW21 52 aa10.54□□□□□ -0.72
VPS36-207ENST00000611132 SCXQ7RTU7 201 aa10.54□□□□□ -0.72
VPS36-207ENST00000611132 BRK1Q8WUW1 75 aa10.54□□□□□ -0.72
VPS36-207ENST00000611132 FN1P02751 2386 aaKnown RBP10.54□□□□□ -0.72
VPS36-207ENST00000611132 ABCA2Q9BZC7 2435 aa10.53□□□□□ -0.72
VPS36-207ENST00000611132 IGKV2D-24A0A075B6R9 120 aa10.53□□□□□ -0.72
VPS36-207ENST00000611132 BEAN1Q3B7T3 259 aa10.53□□□□□ -0.72
VPS36-207ENST00000611132 DEFB4AO15263 64 aa10.52□□□□□ -0.72
VPS36-207ENST00000611132 IGLV5-39A0A0G2JS06 123 aa10.51□□□□□ -0.73
VPS36-207ENST00000611132 ETDCA0A1B0GVM5 59 aa10.51□□□□□ -0.73
VPS36-207ENST00000611132 Q6ZQY7 126 aa10.51□□□□□ -0.73
VPS36-207ENST00000611132 LINC00846Q9NV44 126 aa10.51□□□□□ -0.73
VPS36-207ENST00000611132 BPY2O14599 106 aa10.51□□□□□ -0.73
VPS36-207ENST00000611132 Q8N2B8 174 aa10.51□□□□□ -0.73
VPS36-207ENST00000611132 DEFB135Q30KP9 77 aa10.5□□□□□ -0.73
VPS36-207ENST00000611132 SNURFQ9Y675 71 aa10.5□□□□□ -0.73
VPS36-207ENST00000611132 RANBP2P49792 3224 aaKnown RBP10.5□□□□□ -0.73
VPS36-207ENST00000611132 HRCT1Q6UXD1 115 aa10.5□□□□□ -0.73
VPS36-207ENST00000611132 ODF3L2Q3SX64 289 aa10.5□□□□□ -0.73
VPS36-207ENST00000611132 Q8IZM0 81 aa10.5□□□□□ -0.73
VPS36-207ENST00000611132 LINC00337Q8N6G1 96 aa10.5□□□□□ -0.73
VPS36-207ENST00000611132 NDUFC1O43677 76 aa10.49□□□□□ -0.73
VPS36-207ENST00000611132 IGHV4-31P0DP07 118 aa10.49□□□□□ -0.73
VPS36-207ENST00000611132 A0A087WZ39 114 aa10.49□□□□□ -0.73
VPS36-207ENST00000611132 DNAJC9-AS1A6NH13 148 aa10.49□□□□□ -0.73
VPS36-207ENST00000611132 CD164L2Q6UWJ8 174 aa10.49□□□□□ -0.73
VPS36-207ENST00000611132 NDUFC2-KCTD14E9PQ53 114 aa10.48□□□□□ -0.73
VPS36-207ENST00000611132 KLK9Q2XQG4 91 aa10.48□□□□□ -0.73
VPS36-207ENST00000611132 Q8N814 137 aa10.48□□□□□ -0.73
VPS36-207ENST00000611132 NHLRC4P0CG21 123 aaPredicted RBP10.48□□□□□ -0.73
VPS36-207ENST00000611132 WFDC11Q8NEX6 87 aa10.48□□□□□ -0.73
VPS36-207ENST00000611132 PIEZO1Q92508 2521 aa10.47□□□□□ -0.73
VPS36-207ENST00000611132 C9orf66Q5T8R8 295 aa10.47□□□□□ -0.73
VPS36-207ENST00000611132 XAGE1AQ9HD64 81 aa10.47□□□□□ -0.73
VPS36-207ENST00000611132 UBE2BP63146 152 aa10.47□□□□□ -0.73
VPS36-207ENST00000611132 C1orf158Q8N1D5 194 aa10.47□□□□□ -0.73
VPS36-207ENST00000611132 COL27A1Q8IZC6 1860 aaPredicted RBP10.47□□□□□ -0.73
VPS36-207ENST00000611132 NTM-AS1Q6ZSK4 140 aa10.46□□□□□ -0.73
VPS36-207ENST00000611132 LITAFQ99732 161 aa10.46□□□□□ -0.73
VPS36-207ENST00000611132 TRANK1O15050 2925 aa10.46□□□□□ -0.73
VPS36-207ENST00000611132 IGLV4-60A0A075B6I1 120 aa10.46□□□□□ -0.73
VPS36-207ENST00000611132 TRAV7A0A075B6U4 112 aa10.46□□□□□ -0.73
VPS36-207ENST00000611132 CRYGAP11844 174 aa10.46□□□□□ -0.73
VPS36-207ENST00000611132 IGLV5-45A0A087WSX0 123 aa10.46□□□□□ -0.74
VPS36-207ENST00000611132 COX17Q14061 63 aa10.46□□□□□ -0.74
VPS36-207ENST00000611132 MPLKIPQ8TAP9 179 aa10.46□□□□□ -0.74
VPS36-207ENST00000611132 ATP5EP56381 51 aaPredicted RBP10.45□□□□□ -0.74
VPS36-207ENST00000611132 WFDC10AQ9H1F0 79 aa10.45□□□□□ -0.74
VPS36-207ENST00000611132 ABCA12Q86UK0 2595 aa10.45□□□□□ -0.74
VPS36-207ENST00000611132 MP68P56378 58 aa10.44□□□□□ -0.74
VPS36-207ENST00000611132 SOSTDC1Q6X4U4 206 aa10.44□□□□□ -0.74
VPS36-207ENST00000611132 DEFB121Q5J5C9 76 aa10.44□□□□□ -0.74
VPS36-207ENST00000611132 BBC3Q96PG8 261 aaPredicted RBP10.44□□□□□ -0.74
VPS36-207ENST00000611132 LYRM9A8MSI8 78 aa10.44□□□□□ -0.74
VPS36-207ENST00000611132 Q9UF83 564 aa10.43□□□□□ -0.74
VPS36-207ENST00000611132 PKIGQ9Y2B9 76 aa10.43□□□□□ -0.74
VPS36-207ENST00000611132 SMIM26A0A096LP01 95 aa10.43□□□□□ -0.74
VPS36-207ENST00000611132 PSCAO43653 123 aa10.43□□□□□ -0.74
VPS36-207ENST00000611132 PRR3P79522 188 aaKnown RBP10.43□□□□□ -0.74
VPS36-207ENST00000611132 FAM218AQ96MZ4 157 aa10.43□□□□□ -0.74
VPS36-207ENST00000611132 CFAP54Q96N23 3096 aa10.42□□□□□ -0.74
VPS36-207ENST00000611132 FAM19A1Q7Z5A9 133 aa10.42□□□□□ -0.74
VPS36-207ENST00000611132 SERP1Q9Y6X1 66 aa10.42□□□□□ -0.74
VPS36-207ENST00000611132 CDK2AP2O75956 126 aa10.42□□□□□ -0.74
VPS36-207ENST00000611132 PRB2P02812 416 aaPredicted RBP10.42□□□□□ -0.74
VPS36-207ENST00000611132 C11orf72Q8NBR9 251 aa10.42□□□□□ -0.74
VPS36-207ENST00000611132 PKD1L2Q7Z442 2459 aa10.41□□□□□ -0.74
VPS36-207ENST00000611132 RMI2Q96E14 147 aa10.41□□□□□ -0.74
VPS36-207ENST00000611132 MUC4Q99102 2169 aa10.41□□□□□ -0.74
VPS36-207ENST00000611132 LAMA3Q16787 3333 aa10.4□□□□□ -0.74
VPS36-207ENST00000611132 HILS1P60008 231 aa10.39□□□□□ -0.75
VPS36-207ENST00000611132 RPS28P62857 69 aaKnown RBP10.39□□□□□ -0.75
VPS36-207ENST00000611132 MUC7Q8TAX7 377 aa10.39□□□□□ -0.75
VPS36-207ENST00000611132 A0A0U1RQV1 116 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms