RNA–Protein interactions for RNA: ENST00000611008.4

TARDBP-212, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-212ENST00000611008 TRGV3P03979 118 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 P0C880 135 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 SAA1P0DJI8 122 aaPredicted RBP1.7□□□□□ -2.14
TARDBP-212ENST00000611008 IGHV3-30-3P0DP02 117 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 SLC25A16P16260 332 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 PEBP1P30086 187 aaKnown RBP1.7□□□□□ -2.14
TARDBP-212ENST00000611008 CCL8P80075 99 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 ZNF345Q14585 488 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 S100A7L2Q5SY68 101 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 CNEP1R1Q8N9A8 125 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 OR8B3Q8NGG8 313 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 PFN4Q8NHR9 129 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 CCL4L1Q8NHW4 92 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 MYOZ3Q8TDC0 251 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 OR8B2Q96RD0 313 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 GABARAPL1Q9H0R8 117 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 CXCL16Q9H2A7 254 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 SMDT1Q9H4I9 107 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 C11orf1Q9H5F2 150 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 THADAQ6YHU6 1953 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 HERC2O95714 4834 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 ZNF407Q9C0G0 2248 aa1.7□□□□□ -2.14
TARDBP-212ENST00000611008 RYR2Q92736 4967 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 NUMA1Q14980 2115 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 PCDH15Q96QU1 1955 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 TRBV24-1A0A075B6N3 115 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 TRAV14DV4A0A0A6YYC5 116 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 IGHV3-21A0A0B4J1V1 117 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 TRAV17A0A0B4J275 112 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 A0A1W2PQD3 144 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 KANTRA0A1W2PQU2 76 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 A8MWP4 228 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 IBA57-AS1B1ANH7 110 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 E7EQL1 145 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 IGHV1-69P01742 117 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 CCKP06307 115 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 PIRTP0C851 137 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 PIPP12273 146 aaPredicted RBP1.69□□□□□ -2.14
TARDBP-212ENST00000611008 SUPT4H1P63272 117 aaKnown RBP1.69□□□□□ -2.14
TARDBP-212ENST00000611008 COMMD6Q7Z4G1 85 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 SERP2Q8N6R1 65 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 CMTM2Q8TAZ6 248 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 AQP3Q92482 292 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 CST11Q9H112 138 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 NXT2Q9NPJ8 142 aaKnown RBP1.69□□□□□ -2.14
TARDBP-212ENST00000611008 LINC00474Q9P2X8 69 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 CNTRLQ7Z7A1 2325 aa1.69□□□□□ -2.14
TARDBP-212ENST00000611008 LOC107984156A0A0G2JMH3 177 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 C19orf71A6NCJ1 209 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 LECT2O14960 151 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 CCL16O15467 120 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 LYRM1O43325 122 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 SLC25A20O43772 301 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 LY6HO94772 140 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 IGKV1D-33P01593 117 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 IGKV1-33P01594 117 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 SMIM13P0DJ93 91 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 PTHLHP12272 177 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 KRTDAPP60985 99 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 XAF1Q6GPH4 301 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 ZGRF1Q86YA3 2104 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 ARL17AQ8IVW1 177 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 TRGV9Q99603 122 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 RETNLBQ9BQ08 111 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 SLC50A1Q9BRV3 221 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 HIGD1BQ9P298 99 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 AKAP6Q13023 2319 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 LAMA4Q16363 1823 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 TNRC6BQ9UPQ9 1833 aaKnown RBP1.68□□□□□ -2.14
TARDBP-212ENST00000611008 SEC16AO15027 2179 aa1.68□□□□□ -2.14
TARDBP-212ENST00000611008 MED12LQ86YW9 2145 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 PLXNA2O75051 1894 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 COL4A2P08572 1712 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 C17orf51A8MQB3 221 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 B4DSR2 109 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 C17orf112F2Z3M2 114 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 GNRH2O43555 120 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 SH2D1AO60880 128 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 IGLV1-51P01701 117 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 ASAH2BP0C7U1 165 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 HRES1P13985 223 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 RPL28P46779 137 aaKnown RBP1.67□□□□□ -2.14
TARDBP-212ENST00000611008 RHOHQ15669 191 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 MIAQ16674 131 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 Q1T7F1 81 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 MPV17LQ2QL34 196 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 ASB16-AS1Q495Z4 193 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 CFAP126Q5VTH2 177 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 RPL7L1Q6DKI1 246 aaKnown RBP1.67□□□□□ -2.14
TARDBP-212ENST00000611008 KRTAP13-1Q8IUC0 172 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 SMCR5Q8TEV8 140 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 ODF3Q96PU9 254 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 CYSTM1Q9H1C7 97 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 U3KQK5 164 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 KIAA1549Q9HCM3 1950 aa1.67□□□□□ -2.14
TARDBP-212ENST00000611008 SHANK1Q9Y566 2161 aa1.66□□□□□ -2.14
TARDBP-212ENST00000611008 ANK3Q12955 4377 aaKnown RBP1.66□□□□□ -2.14
TARDBP-212ENST00000611008 IGKV2D-26A0A0A0MRZ7 120 aa1.66□□□□□ -2.14
TARDBP-212ENST00000611008 TRAV3A0A0B4J244 114 aa1.66□□□□□ -2.14
TARDBP-212ENST00000611008 hDV103S1A0JD37 113 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms