RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 ACYP1P07311 99 aa12.08□□□□□ -0.48
TNIP1-220ENST00000610535 Q6YL49 198 aa12.08□□□□□ -0.48
TNIP1-220ENST00000610535 FAM110AQ9BQ89 295 aa12.07□□□□□ -0.48
TNIP1-220ENST00000610535 NOTCH2Q04721 2471 aa12.07□□□□□ -0.48
TNIP1-220ENST00000610535 HELZ2Q9BYK8 2649 aaKnown RBP12.07□□□□□ -0.48
TNIP1-220ENST00000610535 CDC42SE2Q9NRR3 84 aa12.07□□□□□ -0.48
TNIP1-220ENST00000610535 TRACP01848 142 aa12.06□□□□□ -0.48
TNIP1-220ENST00000610535 DEFB114Q30KQ6 69 aa12.06□□□□□ -0.48
TNIP1-220ENST00000610535 Q6ZTI0 123 aa12.06□□□□□ -0.48
TNIP1-220ENST00000610535 C1orf158Q8N1D5 194 aa12.06□□□□□ -0.48
TNIP1-220ENST00000610535 PEMTQ9UBM1 199 aa12.06□□□□□ -0.48
TNIP1-220ENST00000610535 RPL36AP83881 106 aaKnown RBP12.06□□□□□ -0.48
TNIP1-220ENST00000610535 RPL36ALQ969Q0 106 aaKnown RBP12.06□□□□□ -0.48
TNIP1-220ENST00000610535 GAGE2AQ6NT46 116 aa12.05□□□□□ -0.48
TNIP1-220ENST00000610535 FAM19A3Q7Z5A8 133 aa12.05□□□□□ -0.48
TNIP1-220ENST00000610535 COPS9Q8WXC6 57 aa12.05□□□□□ -0.48
TNIP1-220ENST00000610535 LINC00643Q86TS7 51 aa12.04□□□□□ -0.48
TNIP1-220ENST00000610535 A0A096LNT2 108 aa12.04□□□□□ -0.48
TNIP1-220ENST00000610535 CSDC2Q9Y534 153 aaKnown RBP12.04□□□□□ -0.48
TNIP1-220ENST00000610535 AKAP9Q99996 3911 aa12.03□□□□□ -0.48
TNIP1-220ENST00000610535 IGKV3OR2-268A0A0C4DH90 116 aa12.03□□□□□ -0.48
TNIP1-220ENST00000610535 ODF3L2Q3SX64 289 aa12.03□□□□□ -0.48
TNIP1-220ENST00000610535 IMUPQ9GZP8 106 aa12.03□□□□□ -0.48
TNIP1-220ENST00000610535 JMJD1CQ15652 2540 aa12.03□□□□□ -0.48
TNIP1-220ENST00000610535 K7EQD1 137 aa12.03□□□□□ -0.48
TNIP1-220ENST00000610535 DSCR9P59020 149 aa12.02□□□□□ -0.49
TNIP1-220ENST00000610535 LINC00337Q8N6G1 96 aa12.02□□□□□ -0.49
TNIP1-220ENST00000610535 TOMM7Q9P0U1 55 aa12.02□□□□□ -0.49
TNIP1-220ENST00000610535 J3QLI3 93 aa12.02□□□□□ -0.49
TNIP1-220ENST00000610535 C9orf153Q5TBE3 101 aa12.01□□□□□ -0.49
TNIP1-220ENST00000610535 MIR7-3HGQ8N6C7 128 aa12.01□□□□□ -0.49
TNIP1-220ENST00000610535 STHQ8IWL8 128 aa12.01□□□□□ -0.49
TNIP1-220ENST00000610535 SDIM1Q6ZPB5 146 aa12□□□□□ -0.49
TNIP1-220ENST00000610535 IGKV2-28A0A075B6P5 120 aa12□□□□□ -0.49
TNIP1-220ENST00000610535 IGKV2D-28P01615 120 aa12□□□□□ -0.49
TNIP1-220ENST00000610535 C9orf129Q5T035 196 aaKnown RBP12□□□□□ -0.49
TNIP1-220ENST00000610535 IL17DQ8TAD2 202 aa12□□□□□ -0.49
TNIP1-220ENST00000610535 C4orf3Q8WVX3 66 aa12□□□□□ -0.49
TNIP1-220ENST00000610535 HECTD1Q9ULT8 2610 aa11.99□□□□□ -0.49
TNIP1-220ENST00000610535 TRBV10-1A0A0K0K1A3 114 aa11.99□□□□□ -0.49
TNIP1-220ENST00000610535 LOC100131303A0A0U1RQF7 123 aa11.99□□□□□ -0.49
TNIP1-220ENST00000610535 MALP21145 153 aa11.99□□□□□ -0.49
TNIP1-220ENST00000610535 UBE2L6O14933 153 aa11.99□□□□□ -0.49
TNIP1-220ENST00000610535 CRPP02741 224 aa11.99□□□□□ -0.49
TNIP1-220ENST00000610535 NOP10Q9NPE3 64 aaKnown RBP11.99□□□□□ -0.49
TNIP1-220ENST00000610535 IGHV4-31P0DP07 118 aa11.98□□□□□ -0.49
TNIP1-220ENST00000610535 RPL28P46779 137 aaKnown RBP11.98□□□□□ -0.49
TNIP1-220ENST00000610535 C11orf44Q8N8P7 122 aa11.98□□□□□ -0.49
TNIP1-220ENST00000610535 SND1-IT1Q9HBX3 110 aa11.98□□□□□ -0.49
TNIP1-220ENST00000610535 FSHBP01225 129 aa11.98□□□□□ -0.49
TNIP1-220ENST00000610535 A0A087WYN8 130 aa11.97□□□□□ -0.49
TNIP1-220ENST00000610535 TRAV13-2A0A0B4J235 113 aa11.97□□□□□ -0.49
TNIP1-220ENST00000610535 FAM222AQ5U5X8 452 aa11.97□□□□□ -0.49
TNIP1-220ENST00000610535 TMEM243Q9BU79 118 aa11.97□□□□□ -0.49
TNIP1-220ENST00000610535 KLK5Q9Y337 293 aaPredicted RBP11.97□□□□□ -0.49
TNIP1-220ENST00000610535 CR1P17927 2039 aa11.97□□□□□ -0.49
TNIP1-220ENST00000610535 C3orf22Q8N5N4 141 aa11.97□□□□□ -0.49
TNIP1-220ENST00000610535 TMEM126AQ9H061 195 aa11.97□□□□□ -0.49
TNIP1-220ENST00000610535 SMIM11BQ8TCY0 68 aa11.96□□□□□ -0.49
TNIP1-220ENST00000610535 COX7B2Q8TF08 81 aa11.96□□□□□ -0.49
TNIP1-220ENST00000610535 ATP5G1P05496 136 aa11.96□□□□□ -0.49
TNIP1-220ENST00000610535 LINC00158P58513 81 aa11.96□□□□□ -0.49
TNIP1-220ENST00000610535 PPDPFQ9H3Y8 114 aa11.96□□□□□ -0.49
TNIP1-220ENST00000610535 SETXQ7Z333 2677 aaKnown RBP11.96□□□□□ -0.5
TNIP1-220ENST00000610535 INAFM2P0DMQ5 153 aa11.95□□□□□ -0.5
TNIP1-220ENST00000610535 C14orf132Q9NPU4 83 aa11.95□□□□□ -0.5
TNIP1-220ENST00000610535 C5orf38Q86SI9 138 aa11.95□□□□□ -0.5
TNIP1-220ENST00000610535 FASNP49327 2511 aaKnown RBP11.95□□□□□ -0.5
TNIP1-220ENST00000610535 A0A1W2PRX2 142 aa11.95□□□□□ -0.5
TNIP1-220ENST00000610535 DNAL4O96015 105 aa11.94□□□□□ -0.5
TNIP1-220ENST00000610535 PF4P02776 101 aa11.94□□□□□ -0.5
TNIP1-220ENST00000610535 PLA2G2AP14555 144 aa11.94□□□□□ -0.5
TNIP1-220ENST00000610535 DEFB113Q30KQ7 82 aa11.94□□□□□ -0.5
TNIP1-220ENST00000610535 CCL18P55774 89 aa11.93□□□□□ -0.5
TNIP1-220ENST00000610535 WFDC11Q8NEX6 87 aa11.93□□□□□ -0.5
TNIP1-220ENST00000610535 IGLV4-60A0A075B6I1 120 aa11.93□□□□□ -0.5
TNIP1-220ENST00000610535 PFN2P35080 140 aa11.93□□□□□ -0.5
TNIP1-220ENST00000610535 UQCRQO14949 82 aa11.92□□□□□ -0.5
TNIP1-220ENST00000610535 TRGV2A0A075B6R0 118 aa11.92□□□□□ -0.5
TNIP1-220ENST00000610535 IGKV3D-7A0A0C4DH55 119 aa11.92□□□□□ -0.5
TNIP1-220ENST00000610535 C11orf68Q9H3H3 251 aaKnown RBP11.91□□□□□ -0.5
TNIP1-220ENST00000610535 CXCL5P42830 114 aa11.91□□□□□ -0.5
TNIP1-220ENST00000610535 GCN1Q92616 2671 aaKnown RBP11.9□□□□□ -0.5
TNIP1-220ENST00000610535 SLPIP03973 132 aa11.9□□□□□ -0.5
TNIP1-220ENST00000610535 LOC107984640A0A0U1RRK4 108 aa11.9□□□□□ -0.5
TNIP1-220ENST00000610535 LECT2O14960 151 aa11.89□□□□□ -0.51
TNIP1-220ENST00000610535 LINC00526Q96FQ7 95 aa11.89□□□□□ -0.51
TNIP1-220ENST00000610535 WFDC10AQ9H1F0 79 aa11.89□□□□□ -0.51
TNIP1-220ENST00000610535 UNC79Q9P2D8 2635 aa11.89□□□□□ -0.51
TNIP1-220ENST00000610535 GIG44P09565 113 aaPredicted RBP11.89□□□□□ -0.51
TNIP1-220ENST00000610535 OR13C6PQ8NH95 151 aa11.89□□□□□ -0.51
TNIP1-220ENST00000610535 IGHV3OR16-9A0A0B4J2B5 98 aa11.88□□□□□ -0.51
TNIP1-220ENST00000610535 PLAC8L1A1L4L8 177 aa11.88□□□□□ -0.51
TNIP1-220ENST00000610535 NCR3O14931 201 aa11.88□□□□□ -0.51
TNIP1-220ENST00000610535 PAX4O43316 350 aa11.88□□□□□ -0.51
TNIP1-220ENST00000610535 LINC00846Q9NV44 126 aa11.88□□□□□ -0.51
TNIP1-220ENST00000610535 PDZD2O15018 2839 aa11.87□□□□□ -0.51
TNIP1-220ENST00000610535 A0A087WVE0 104 aa11.87□□□□□ -0.51
TNIP1-220ENST00000610535 COX7CP15954 63 aa11.87□□□□□ -0.51
TNIP1-220ENST00000610535 LRRC75A-AS1Q8N1F1 130 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms