RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	FAM168B	A1KXE4	195 aa		11.02	□□□□□ -0.65
CIRBP-238	ENST00000592412		H0Y9J4	135 aa		11.02	□□□□□ -0.65
CIRBP-238	ENST00000592412	SPAG11B	Q08648	103 aa		11.02	□□□□□ -0.65
CIRBP-238	ENST00000592412	RNF151	Q2KHN1	245 aa		11.02	□□□□□ -0.65
CIRBP-238	ENST00000592412		Q6ZUT4	128 aa		11.02	□□□□□ -0.65
CIRBP-238	ENST00000592412	ADCYAP1	P18509	176 aa		11.01	□□□□□ -0.65
CIRBP-238	ENST00000592412	MRPL54	Q6P161	138 aa	Known RBP	11.01	□□□□□ -0.65
CIRBP-238	ENST00000592412	ANAPC16	Q96DE5	110 aa		11.01	□□□□□ -0.65
CIRBP-238	ENST00000592412	LINC00862	A6NCI5	91 aa		11	□□□□□ -0.65
CIRBP-238	ENST00000592412	S100A8	P05109	93 aa		11	□□□□□ -0.65
CIRBP-238	ENST00000592412	KRTAP7-1	Q8IUC3	87 aa		11	□□□□□ -0.65
CIRBP-238	ENST00000592412	NRAC	Q8N912	160 aa		11	□□□□□ -0.65
CIRBP-238	ENST00000592412	FAM104A	Q969W3	186 aa		11	□□□□□ -0.65
CIRBP-238	ENST00000592412	VCY	O14598	125 aa		10.99	□□□□□ -0.65
CIRBP-238	ENST00000592412	HBB	P68871	147 aa		10.99	□□□□□ -0.65
CIRBP-238	ENST00000592412	C10orf25	Q5T742	122 aa		10.99	□□□□□ -0.65
CIRBP-238	ENST00000592412	MRPL35	Q9NZE8	188 aa	Known RBP	10.99	□□□□□ -0.65
CIRBP-238	ENST00000592412	FAT4	Q6V0I7	4981 aa		10.98	□□□□□ -0.65
CIRBP-238	ENST00000592412		A0A087WZ39	114 aa		10.98	□□□□□ -0.65
CIRBP-238	ENST00000592412	FCER1G	P30273	86 aa		10.98	□□□□□ -0.65
CIRBP-238	ENST00000592412	FAM104B	Q5XKR9	115 aa		10.98	□□□□□ -0.65
CIRBP-238	ENST00000592412	OR10D4P	Q8NGN7	298 aa		10.98	□□□□□ -0.65
CIRBP-238	ENST00000592412	SEC11C	Q9BY50	192 aa		10.98	□□□□□ -0.65
CIRBP-238	ENST00000592412	IGLV1-50	A0A075B6I6	118 aa		10.97	□□□□□ -0.65
CIRBP-238	ENST00000592412		A0A1B0GXF2	115 aa		10.97	□□□□□ -0.65
CIRBP-238	ENST00000592412	SUMO2	P61956	95 aa	Known RBP	10.97	□□□□□ -0.65
CIRBP-238	ENST00000592412	KRTAP9-2	Q9BYQ4	174 aa		10.97	□□□□□ -0.65
CIRBP-238	ENST00000592412	PPP1R17	O96001	155 aa		10.96	□□□□□ -0.65
CIRBP-238	ENST00000592412	MRPL51	Q4U2R6	128 aa	Known RBP	10.96	□□□□□ -0.65
CIRBP-238	ENST00000592412	ATP5L2	Q7Z4Y8	100 aa		10.96	□□□□□ -0.65
CIRBP-238	ENST00000592412	TIMM21	Q9BVV7	248 aa		10.96	□□□□□ -0.65
CIRBP-238	ENST00000592412	IGHV3OR16-9	A0A0B4J2B5	98 aa		10.95	□□□□□ -0.66
CIRBP-238	ENST00000592412	TLX1NB	P0CAT3	122 aa		10.95	□□□□□ -0.66
CIRBP-238	ENST00000592412	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	10.95	□□□□□ -0.66
CIRBP-238	ENST00000592412	ORAOV1	Q8WV07	137 aa		10.95	□□□□□ -0.66
CIRBP-238	ENST00000592412	CKS2	P33552	79 aa		10.94	□□□□□ -0.66
CIRBP-238	ENST00000592412	UNQ6190/PRO20217	Q6UXQ8	127 aa		10.94	□□□□□ -0.66
CIRBP-238	ENST00000592412	CTDSP1	Q9GZU7	261 aa		10.94	□□□□□ -0.66
CIRBP-238	ENST00000592412	C6orf48	Q9UBA6	75 aa		10.94	□□□□□ -0.66
CIRBP-238	ENST00000592412	RPL39	P62891	51 aa	Known RBP	10.93	□□□□□ -0.66
CIRBP-238	ENST00000592412	SMAGP	Q0VAQ4	97 aa		10.93	□□□□□ -0.66
CIRBP-238	ENST00000592412	PRR4	Q16378	134 aa		10.93	□□□□□ -0.66
CIRBP-238	ENST00000592412	IMMP2L	Q96T52	175 aa		10.93	□□□□□ -0.66
CIRBP-238	ENST00000592412	KIR2DL4	Q99706	377 aa		10.93	□□□□□ -0.66
CIRBP-238	ENST00000592412	NDUFA1	O15239	70 aa		10.92	□□□□□ -0.66
CIRBP-238	ENST00000592412		D6R8Y8	96 aa		10.91	□□□□□ -0.66
CIRBP-238	ENST00000592412		F8WDY8	70 aa		10.91	□□□□□ -0.66
CIRBP-238	ENST00000592412	C10orf91	Q5T1B1	145 aa		10.91	□□□□□ -0.66
CIRBP-238	ENST00000592412	GAGE2E	Q4V326	116 aa		10.9	□□□□□ -0.66
CIRBP-238	ENST00000592412	GAGE2D	Q9UEU5	116 aa		10.9	□□□□□ -0.66
CIRBP-238	ENST00000592412	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.9	□□□□□ -0.66
CIRBP-238	ENST00000592412	TNFRSF6B	O95407	300 aa		10.89	□□□□□ -0.67
CIRBP-238	ENST00000592412	PPBP	P02775	128 aa		10.89	□□□□□ -0.67
CIRBP-238	ENST00000592412	KIAA0087	Q14695	138 aa		10.89	□□□□□ -0.67
CIRBP-238	ENST00000592412	C20orf78	Q9BR46	151 aa		10.89	□□□□□ -0.67
CIRBP-238	ENST00000592412	TRBV24-1	A0A075B6N3	115 aa		10.88	□□□□□ -0.67
CIRBP-238	ENST00000592412		M0QXV9	152 aa		10.88	□□□□□ -0.67
CIRBP-238	ENST00000592412	ORMDL3	Q8N138	153 aa		10.88	□□□□□ -0.67
CIRBP-238	ENST00000592412	TMEM18	Q96B42	140 aa		10.88	□□□□□ -0.67
CIRBP-238	ENST00000592412	NPY	P01303	97 aa		10.87	□□□□□ -0.67
CIRBP-238	ENST00000592412	S100P	P25815	95 aa		10.87	□□□□□ -0.67
CIRBP-238	ENST00000592412	UBE2D1	P51668	147 aa		10.87	□□□□□ -0.67
CIRBP-238	ENST00000592412	RPL32	P62910	135 aa	Known RBP	10.87	□□□□□ -0.67
CIRBP-238	ENST00000592412	LCE2A	Q5TA79	106 aa	Predicted RBP	10.87	□□□□□ -0.67
CIRBP-238	ENST00000592412	TMEM136	Q6ZRR5	245 aa		10.87	□□□□□ -0.67
CIRBP-238	ENST00000592412	MUC17	Q685J3	4493 aa		10.86	□□□□□ -0.67
CIRBP-238	ENST00000592412	TRAV9-1	A0A075B6T8	112 aa		10.86	□□□□□ -0.67
CIRBP-238	ENST00000592412	RPL13A	P40429	203 aa	Known RBP	10.86	□□□□□ -0.67
CIRBP-238	ENST00000592412	MRPS36	P82909	103 aa	Known RBP	10.86	□□□□□ -0.67
CIRBP-238	ENST00000592412	RHEB	Q15382	184 aa		10.86	□□□□□ -0.67
CIRBP-238	ENST00000592412	C9orf129	Q5T035	196 aa	Known RBP	10.86	□□□□□ -0.67
CIRBP-238	ENST00000592412	RPS10P5	Q9NQ39	176 aa		10.86	□□□□□ -0.67
CIRBP-238	ENST00000592412	UBE2B	P63146	152 aa		10.85	□□□□□ -0.67
CIRBP-238	ENST00000592412	NDUFA5	Q16718	116 aa		10.85	□□□□□ -0.67
CIRBP-238	ENST00000592412	PRELID3A	Q96N28	172 aa		10.85	□□□□□ -0.67
CIRBP-238	ENST00000592412	SMIM2	Q9BVW6	85 aa		10.85	□□□□□ -0.67
CIRBP-238	ENST00000592412	SPANXA1	Q9NS26	97 aa		10.85	□□□□□ -0.67
CIRBP-238	ENST00000592412	IFITM10	A6NMD0	228 aa		10.84	□□□□□ -0.67
CIRBP-238	ENST00000592412	APOC3	P02656	99 aa		10.84	□□□□□ -0.67
CIRBP-238	ENST00000592412	C2orf82	Q6UX34	121 aa		10.84	□□□□□ -0.67
CIRBP-238	ENST00000592412	TCAP	O15273	167 aa		10.83	□□□□□ -0.68
CIRBP-238	ENST00000592412	LAMTOR2	Q9Y2Q5	125 aa		10.82	□□□□□ -0.68
CIRBP-238	ENST00000592412	TRBV30	A0A0K0K1B3	111 aa		10.81	□□□□□ -0.68
CIRBP-238	ENST00000592412		A0A0U1RQV1	116 aa		10.81	□□□□□ -0.68
CIRBP-238	ENST00000592412	NDUFC2-KCTD14	E9PQ53	114 aa		10.81	□□□□□ -0.68
CIRBP-238	ENST00000592412	SNAPIN	O95295	136 aa		10.81	□□□□□ -0.68
CIRBP-238	ENST00000592412	LINC00242	Q5T6M2	205 aa		10.81	□□□□□ -0.68
CIRBP-238	ENST00000592412	SVBP	Q8N300	66 aa		10.81	□□□□□ -0.68
CIRBP-238	ENST00000592412	ZNF861P	O60384	105 aa		10.8	□□□□□ -0.68
CIRBP-238	ENST00000592412	MAP1LC3A	Q9H492	121 aa		10.8	□□□□□ -0.68
CIRBP-238	ENST00000592412	TGIF2-C20orf24	A0A0A6YYL0	155 aa		10.79	□□□□□ -0.68
CIRBP-238	ENST00000592412	LOC389332	A0A1B0GUA5	103 aa		10.79	□□□□□ -0.68
CIRBP-238	ENST00000592412	TSPAN13	O95857	204 aa		10.79	□□□□□ -0.68
CIRBP-238	ENST00000592412	RAB5A	P20339	215 aa		10.79	□□□□□ -0.68
CIRBP-238	ENST00000592412		A0A087X002	238 aa		10.78	□□□□□ -0.68
CIRBP-238	ENST00000592412	IGLV4-3	A0A075B6K6	122 aa		10.77	□□□□□ -0.69
CIRBP-238	ENST00000592412	PRSS47	A8MTI9	375 aa		10.77	□□□□□ -0.69
CIRBP-238	ENST00000592412	KIAA1644	Q3SXP7	199 aa		10.77	□□□□□ -0.69
CIRBP-238	ENST00000592412	COX19	Q49B96	90 aa		10.77	□□□□□ -0.69
CIRBP-238	ENST00000592412	GNB1L	Q9BYB4	327 aa		10.77	□□□□□ -0.69

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