RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 TRGC2P03986 189 aa4.87□□□□□ -1.63
VMP1-213ENST00000591877 MPV17L2Q567V2 206 aa4.87□□□□□ -1.63
VMP1-213ENST00000591877 SPANXN1Q5VSR9 72 aa4.87□□□□□ -1.63
VMP1-213ENST00000591877 ENHOQ6UWT2 76 aa4.87□□□□□ -1.63
VMP1-213ENST00000591877 Q6ZSA8 131 aa4.87□□□□□ -1.63
VMP1-213ENST00000591877 ATP5L2Q7Z4Y8 100 aa4.87□□□□□ -1.63
VMP1-213ENST00000591877 MTURNQ8N3F0 131 aa4.87□□□□□ -1.63
VMP1-213ENST00000591877 FRZBQ92765 325 aa4.87□□□□□ -1.63
VMP1-213ENST00000591877 UBE2WQ96B02 151 aa4.87□□□□□ -1.63
VMP1-213ENST00000591877 CHCHD7Q9BUK0 85 aa4.87□□□□□ -1.63
VMP1-213ENST00000591877 NAT8BQ9UHF3 227 aa4.87□□□□□ -1.63
VMP1-213ENST00000591877 FLG2Q5D862 2391 aaPredicted RBP4.87□□□□□ -1.63
VMP1-213ENST00000591877 IGKV2D-24A0A075B6R9 120 aa4.86□□□□□ -1.63
VMP1-213ENST00000591877 A0A087WX48 190 aa4.86□□□□□ -1.63
VMP1-213ENST00000591877 LOC105371267A0A1B0GV96 52 aa4.86□□□□□ -1.63
VMP1-213ENST00000591877 PHOX2AO14813 284 aa4.86□□□□□ -1.63
VMP1-213ENST00000591877 S100A6P06703 90 aa4.86□□□□□ -1.63
VMP1-213ENST00000591877 RPS20P60866 119 aaKnown RBP4.86□□□□□ -1.63
VMP1-213ENST00000591877 RPL32P62910 135 aaKnown RBP4.86□□□□□ -1.63
VMP1-213ENST00000591877 FER1L6-AS1Q8NA97 138 aa4.86□□□□□ -1.63
VMP1-213ENST00000591877 OR2D3Q8NGH3 330 aa4.86□□□□□ -1.63
VMP1-213ENST00000591877 GNB1LQ9BYB4 327 aa4.86□□□□□ -1.63
VMP1-213ENST00000591877 DMBT1Q9UGM3 2413 aaPredicted RBP4.85□□□□□ -1.63
VMP1-213ENST00000591877 HIGD1CA8MV81 97 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 M0QY20 66 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 HIST1H2BKO60814 126 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 HLA-DQA1P01909 254 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 HIST1H2BJP06899 126 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 HIST1H2BOP23527 126 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 HIST1H2BBP33778 126 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 FOXA3P55318 350 aaPredicted RBP4.85□□□□□ -1.63
VMP1-213ENST00000591877 HIST1H2BDP58876 126 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 HIST1H2BCP62807 126 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 HIST2H2BEQ16778 126 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.85□□□□□ -1.63
VMP1-213ENST00000591877 KRTAP26-1Q6PEX3 210 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 Q8N976 141 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 NUP35Q8NFH5 326 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 HIST1H2BHQ93079 126 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 RMI2Q96E14 147 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 AP1S3Q96PC3 154 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 HIST1H2BNQ99877 126 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 HIST1H2BMQ99879 126 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 TRAPPC1Q9Y5R8 145 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 MYCBP2O75592 4640 aa4.85□□□□□ -1.63
VMP1-213ENST00000591877 HERC1Q15751 4861 aa4.84□□□□□ -1.63
VMP1-213ENST00000591877 A0A1B0GW15 77 aa4.84□□□□□ -1.63
VMP1-213ENST00000591877 A0A1B0GWB2 263 aa4.84□□□□□ -1.63
VMP1-213ENST00000591877 A0A1B0GXF2 115 aa4.84□□□□□ -1.63
VMP1-213ENST00000591877 TMEM262E9PQX1 116 aa4.84□□□□□ -1.63
VMP1-213ENST00000591877 TRGC1P0CF51 173 aa4.84□□□□□ -1.63
VMP1-213ENST00000591877 SMIM17P0DL12 118 aa4.84□□□□□ -1.63
VMP1-213ENST00000591877 HBBP68871 147 aa4.84□□□□□ -1.63
VMP1-213ENST00000591877 Q0VG73 95 aa4.84□□□□□ -1.63
VMP1-213ENST00000591877 MRPL54Q6P161 138 aaKnown RBP4.84□□□□□ -1.63
VMP1-213ENST00000591877 LYZL1Q6UWQ5 148 aa4.84□□□□□ -1.63
VMP1-213ENST00000591877 C2orf66Q6UXQ4 117 aa4.84□□□□□ -1.63
VMP1-213ENST00000591877 PRR34Q9NV39 138 aa4.84□□□□□ -1.63
VMP1-213ENST00000591877 DHRS4-AS1Q9P1J3 65 aa4.84□□□□□ -1.63
VMP1-213ENST00000591877 A0A1B0GUT8 65 aa4.83□□□□□ -1.64
VMP1-213ENST00000591877 ANGP03950 147 aaKnown RBP4.83□□□□□ -1.64
VMP1-213ENST00000591877 S100A8P05109 93 aa4.83□□□□□ -1.64
VMP1-213ENST00000591877 MGPP08493 103 aa4.83□□□□□ -1.64
VMP1-213ENST00000591877 NTF3P20783 257 aa4.83□□□□□ -1.64
VMP1-213ENST00000591877 RBX1P62877 108 aa4.83□□□□□ -1.64
VMP1-213ENST00000591877 CACNG7P62955 275 aa4.83□□□□□ -1.64
VMP1-213ENST00000591877 FABP9Q0Z7S8 132 aa4.83□□□□□ -1.64
VMP1-213ENST00000591877 IQCJQ1A5X6 159 aa4.83□□□□□ -1.64
VMP1-213ENST00000591877 COA6Q5JTJ3 125 aaKnown RBP4.83□□□□□ -1.64
VMP1-213ENST00000591877 TMEM136Q6ZRR5 245 aa4.83□□□□□ -1.64
VMP1-213ENST00000591877 SCXQ7RTU7 201 aa4.83□□□□□ -1.64
VMP1-213ENST00000591877 GATD1Q8NB37 220 aa4.83□□□□□ -1.64
VMP1-213ENST00000591877 GTSF1Q8WW33 167 aa4.83□□□□□ -1.64
VMP1-213ENST00000591877 BORCS7Q96B45 105 aa4.83□□□□□ -1.64
VMP1-213ENST00000591877 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
VMP1-213ENST00000591877 F2Z2F3 143 aa4.82□□□□□ -1.64
VMP1-213ENST00000591877 ATP5LO75964 103 aa4.82□□□□□ -1.64
VMP1-213ENST00000591877 CTRLP40313 264 aa4.82□□□□□ -1.64
VMP1-213ENST00000591877 TMEM97Q5BJF2 176 aa4.82□□□□□ -1.64
VMP1-213ENST00000591877 CLPSL2Q6UWE3 100 aa4.82□□□□□ -1.64
VMP1-213ENST00000591877 LINC00269Q8N2A0 174 aa4.82□□□□□ -1.64
VMP1-213ENST00000591877 C20orf203Q8NBC4 194 aa4.82□□□□□ -1.64
VMP1-213ENST00000591877 DEFB104AQ8WTQ1 72 aa4.82□□□□□ -1.64
VMP1-213ENST00000591877 PGLYRP4Q96LB8 373 aa4.82□□□□□ -1.64
VMP1-213ENST00000591877 CNFNQ9BYD5 112 aa4.82□□□□□ -1.64
VMP1-213ENST00000591877 DPH3P1Q9H4G8 78 aa4.82□□□□□ -1.64
VMP1-213ENST00000591877 IGLV4-60A0A075B6I1 120 aa4.81□□□□□ -1.64
VMP1-213ENST00000591877 TRBV25-1A0A075B6N4 114 aa4.81□□□□□ -1.64
VMP1-213ENST00000591877 IGHV1-24A0A0C4DH33 117 aa4.81□□□□□ -1.64
VMP1-213ENST00000591877 H7C1H1 209 aa4.81□□□□□ -1.64
VMP1-213ENST00000591877 CRPP02741 224 aa4.81□□□□□ -1.64
VMP1-213ENST00000591877 APCSP02743 223 aa4.81□□□□□ -1.64
VMP1-213ENST00000591877 NDUFA6P56556 154 aa4.81□□□□□ -1.64
VMP1-213ENST00000591877 KRTAP10-4P60372 401 aaPredicted RBP4.81□□□□□ -1.64
VMP1-213ENST00000591877 MIAQ16674 131 aa4.81□□□□□ -1.64
VMP1-213ENST00000591877 CIRBP-AS1Q8TBR5 109 aa4.81□□□□□ -1.64
VMP1-213ENST00000591877 CHAC1Q9BUX1 264 aa4.81□□□□□ -1.64
VMP1-213ENST00000591877 NIT2Q9NQR4 276 aa4.81□□□□□ -1.64
VMP1-213ENST00000591877 KRTAP16-1A8MUX0 517 aa4.8□□□□□ -1.64
VMP1-213ENST00000591877 GAS8-AS1O95177 125 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms