RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-229	ENST00000590704	C14orf177	Q52M58	125 aa		13.63	□□□□□ -0.23
CIRBP-229	ENST00000590704	C5orf38	Q86SI9	138 aa		13.63	□□□□□ -0.23
CIRBP-229	ENST00000590704	GVQW2	A0A096LPI5	108 aa	Predicted RBP	13.62	□□□□□ -0.23
CIRBP-229	ENST00000590704	S100A1	P23297	94 aa		13.62	□□□□□ -0.23
CIRBP-229	ENST00000590704	TEX43	Q6ZNM6	134 aa		13.62	□□□□□ -0.23
CIRBP-229	ENST00000590704	VCX2	Q9H322	139 aa		13.62	□□□□□ -0.23
CIRBP-229	ENST00000590704	HIGD2B	Q4VC39	106 aa		13.61	□□□□□ -0.23
CIRBP-229	ENST00000590704	XG	P55808	180 aa		13.61	□□□□□ -0.23
CIRBP-229	ENST00000590704	RAB5B	P61020	215 aa		13.61	□□□□□ -0.23
CIRBP-229	ENST00000590704	CNBP	P62633	177 aa	Known RBP	13.61	□□□□□ -0.23
CIRBP-229	ENST00000590704	CHCHD1	Q96BP2	118 aa	Known RBP	13.61	□□□□□ -0.23
CIRBP-229	ENST00000590704	LINC00526	Q96FQ7	95 aa		13.61	□□□□□ -0.23
CIRBP-229	ENST00000590704	hDV102S1	A0JD36	115 aa		13.6	□□□□□ -0.23
CIRBP-229	ENST00000590704	LINC01549	A6NIU2	74 aa		13.6	□□□□□ -0.23
CIRBP-229	ENST00000590704	C9orf163	Q8N9P6	203 aa		13.6	□□□□□ -0.23
CIRBP-229	ENST00000590704	COX7A2L	O14548	114 aa		13.59	□□□□□ -0.23
CIRBP-229	ENST00000590704	HBD	P02042	147 aa		13.59	□□□□□ -0.23
CIRBP-229	ENST00000590704	IGHV1-58	A0A0C4DH39	117 aa		13.58	□□□□□ -0.24
CIRBP-229	ENST00000590704	CFAP161	Q6P656	301 aa		13.58	□□□□□ -0.24
CIRBP-229	ENST00000590704		Q6ZN92	141 aa		13.58	□□□□□ -0.24
CIRBP-229	ENST00000590704		Q6ZSA8	131 aa		13.58	□□□□□ -0.24
CIRBP-229	ENST00000590704	CST9L	Q9H4G1	147 aa		13.58	□□□□□ -0.24
CIRBP-229	ENST00000590704	FAT1	Q14517	4588 aa		13.57	□□□□□ -0.24
CIRBP-229	ENST00000590704		A0A087WZ39	114 aa		13.57	□□□□□ -0.24
CIRBP-229	ENST00000590704	HIST1H2BK	O60814	126 aa		13.56	□□□□□ -0.24
CIRBP-229	ENST00000590704	SERF1A	O75920	110 aa		13.56	□□□□□ -0.24
CIRBP-229	ENST00000590704	CDK2AP2	O75956	126 aa		13.56	□□□□□ -0.24
CIRBP-229	ENST00000590704	HIST1H2BJ	P06899	126 aa		13.56	□□□□□ -0.24
CIRBP-229	ENST00000590704	HIST1H2BO	P23527	126 aa		13.56	□□□□□ -0.24
CIRBP-229	ENST00000590704	HIST1H2BB	P33778	126 aa		13.56	□□□□□ -0.24
CIRBP-229	ENST00000590704	HIST1H2BD	P58876	126 aa		13.56	□□□□□ -0.24
CIRBP-229	ENST00000590704	HIST1H2BC	P62807	126 aa		13.56	□□□□□ -0.24
CIRBP-229	ENST00000590704	HIST2H2BE	Q16778	126 aa		13.56	□□□□□ -0.24
CIRBP-229	ENST00000590704	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	13.56	□□□□□ -0.24
CIRBP-229	ENST00000590704	FAM19A2	Q8N3H0	131 aa		13.56	□□□□□ -0.24
CIRBP-229	ENST00000590704	HIST1H2BH	Q93079	126 aa		13.56	□□□□□ -0.24
CIRBP-229	ENST00000590704	HIST1H2BN	Q99877	126 aa		13.56	□□□□□ -0.24
CIRBP-229	ENST00000590704	HIST1H2BM	Q99879	126 aa		13.56	□□□□□ -0.24
CIRBP-229	ENST00000590704		A0A0J9YXV3	536 aa		13.55	□□□□□ -0.24
CIRBP-229	ENST00000590704	SDIM1	Q6ZPB5	146 aa		13.55	□□□□□ -0.24
CIRBP-229	ENST00000590704	IGHV3-64	A0A075B6Q5	118 aa		13.55	□□□□□ -0.24
CIRBP-229	ENST00000590704	PAPPA-AS1	Q5QFB9	102 aa		13.55	□□□□□ -0.24
CIRBP-229	ENST00000590704	BAGE3	Q86Y29	109 aa		13.55	□□□□□ -0.24
CIRBP-229	ENST00000590704	C2orf88	Q9BSF0	95 aa		13.55	□□□□□ -0.24
CIRBP-229	ENST00000590704	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	13.54	□□□□□ -0.24
CIRBP-229	ENST00000590704	KIAA0087	Q14695	138 aa		13.54	□□□□□ -0.24
CIRBP-229	ENST00000590704	PMVK	Q15126	192 aa		13.53	□□□□□ -0.24
CIRBP-229	ENST00000590704	IGLV4-69	A0A075B6H9	119 aa		13.52	□□□□□ -0.25
CIRBP-229	ENST00000590704	PANO1	I0J062	215 aa		13.52	□□□□□ -0.25
CIRBP-229	ENST00000590704	CDKN2A-AS1	Q9UH64	79 aa		13.52	□□□□□ -0.25
CIRBP-229	ENST00000590704	IGLV5-45	A0A087WSX0	123 aa		13.51	□□□□□ -0.25
CIRBP-229	ENST00000590704	LINC01561	Q8N1V8	128 aa		13.51	□□□□□ -0.25
CIRBP-229	ENST00000590704	TINCR	A0A1B0GVN0	87 aa		13.5	□□□□□ -0.25
CIRBP-229	ENST00000590704	MAL	P21145	153 aa		13.5	□□□□□ -0.25
CIRBP-229	ENST00000590704	HAMP	P81172	84 aa		13.5	□□□□□ -0.25
CIRBP-229	ENST00000590704	HSBP1	O75506	76 aa		13.49	□□□□□ -0.25
CIRBP-229	ENST00000590704	ATP5L	O75964	103 aa		13.48	□□□□□ -0.25
CIRBP-229	ENST00000590704	HERVK_113	P63121	156 aa		13.48	□□□□□ -0.25
CIRBP-229	ENST00000590704		Q6ZRU5	148 aa		13.48	□□□□□ -0.25
CIRBP-229	ENST00000590704	OR10D4P	Q8NGN7	298 aa		13.48	□□□□□ -0.25
CIRBP-229	ENST00000590704	ORAOV1	Q8WV07	137 aa		13.48	□□□□□ -0.25
CIRBP-229	ENST00000590704	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	13.48	□□□□□ -0.25
CIRBP-229	ENST00000590704	IGLC3	P0DOY3	106 aa		13.47	□□□□□ -0.25
CIRBP-229	ENST00000590704	SPAG11B	Q08648	103 aa		13.47	□□□□□ -0.25
CIRBP-229	ENST00000590704	IFI27L1	Q96BM0	104 aa		13.47	□□□□□ -0.25
CIRBP-229	ENST00000590704	C2orf48	Q96LS8	159 aa		13.47	□□□□□ -0.25
CIRBP-229	ENST00000590704	ZNF561-AS1	K7EIQ3	104 aa		13.46	□□□□□ -0.25
CIRBP-229	ENST00000590704	APOM	O95445	188 aa		13.46	□□□□□ -0.25
CIRBP-229	ENST00000590704	C10orf25	Q5T742	122 aa		13.46	□□□□□ -0.25
CIRBP-229	ENST00000590704	SEC11A	P67812	179 aa		13.45	□□□□□ -0.26
CIRBP-229	ENST00000590704	SYCN	Q0VAF6	134 aa		13.45	□□□□□ -0.26
CIRBP-229	ENST00000590704	CIRBP	Q14011	172 aa	Known RBP	13.45	□□□□□ -0.26
CIRBP-229	ENST00000590704	COA6	Q5JTJ3	125 aa	Known RBP	13.44	□□□□□ -0.26
CIRBP-229	ENST00000590704	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.43	□□□□□ -0.26
CIRBP-229	ENST00000590704	SMIM1	B2RUZ4	78 aa		13.43	□□□□□ -0.26
CIRBP-229	ENST00000590704	KRTAP4-5	Q9BYR2	181 aa		13.43	□□□□□ -0.26
CIRBP-229	ENST00000590704	GEMIN7	Q9H840	131 aa	Known RBP	13.43	□□□□□ -0.26
CIRBP-229	ENST00000590704	NDUFA6	P56556	154 aa		13.42	□□□□□ -0.26
CIRBP-229	ENST00000590704	UNQ6190/PRO20217	Q6UXQ8	127 aa		13.42	□□□□□ -0.26
CIRBP-229	ENST00000590704	CARD19	Q96LW7	228 aa		13.42	□□□□□ -0.26
CIRBP-229	ENST00000590704	TRAV12-1	A0A0B4J245	112 aa		13.42	□□□□□ -0.26
CIRBP-229	ENST00000590704	C11orf86	A6NJI1	115 aa		13.42	□□□□□ -0.26
CIRBP-229	ENST00000590704	CHTF8	P0CG12	524 aa		13.42	□□□□□ -0.26
CIRBP-229	ENST00000590704	ZNF22	P17026	224 aa	Predicted RBP	13.42	□□□□□ -0.26
CIRBP-229	ENST00000590704	SCX	Q7RTU7	201 aa		13.42	□□□□□ -0.26
CIRBP-229	ENST00000590704	CHAC1	Q9BUX1	264 aa		13.42	□□□□□ -0.26
CIRBP-229	ENST00000590704	C2orf82	Q6UX34	121 aa		13.41	□□□□□ -0.26
CIRBP-229	ENST00000590704	LINC00469	Q8N7U9	141 aa		13.41	□□□□□ -0.26
CIRBP-229	ENST00000590704	CIRBP-AS1	Q8TBR5	109 aa		13.41	□□□□□ -0.26
CIRBP-229	ENST00000590704	CAMK2N2	Q96S95	79 aa		13.41	□□□□□ -0.26
CIRBP-229	ENST00000590704	LEPROTL1	O95214	131 aa		13.4	□□□□□ -0.26
CIRBP-229	ENST00000590704	MRPL35	Q9NZE8	188 aa	Known RBP	13.39	□□□□□ -0.27
CIRBP-229	ENST00000590704	C6orf48	Q9UBA6	75 aa		13.39	□□□□□ -0.27
CIRBP-229	ENST00000590704	FABP4	P15090	132 aa		13.38	□□□□□ -0.27
CIRBP-229	ENST00000590704	ODF1	Q14990	250 aa		13.38	□□□□□ -0.27
CIRBP-229	ENST00000590704	CHTOP	Q9Y3Y2	248 aa	Known RBP	13.38	□□□□□ -0.27
CIRBP-229	ENST00000590704	VPS13B	Q7Z7G8	4022 aa		13.38	□□□□□ -0.27
CIRBP-229	ENST00000590704		A0A096LNI7	61 aa		13.37	□□□□□ -0.27
CIRBP-229	ENST00000590704	IGLV5-39	A0A0G2JS06	123 aa		13.37	□□□□□ -0.27
CIRBP-229	ENST00000590704		F8WDY8	70 aa		13.37	□□□□□ -0.27

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