RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 TSPEAR-AS2P59090 65 aa10.54□□□□□ -0.72
RETREG3-208ENST00000589797 LAMTOR3Q9UHA4 124 aa10.54□□□□□ -0.72
RETREG3-208ENST00000589797 KIF25-AS1Q9Y6Z4 181 aa10.54□□□□□ -0.72
RETREG3-208ENST00000589797 GAGE12HA6NDE8 117 aa10.53□□□□□ -0.72
RETREG3-208ENST00000589797 TINCRA0A1B0GVN0 87 aa10.53□□□□□ -0.72
RETREG3-208ENST00000589797 BRI3O95415 125 aa10.53□□□□□ -0.72
RETREG3-208ENST00000589797 TCL1BO95988 128 aa10.52□□□□□ -0.72
RETREG3-208ENST00000589797 PPDPFLQ8WWR9 84 aa10.52□□□□□ -0.72
RETREG3-208ENST00000589797 LINC00315P59091 139 aa10.52□□□□□ -0.73
RETREG3-208ENST00000589797 UBE2D4Q9Y2X8 147 aa10.52□□□□□ -0.73
RETREG3-208ENST00000589797 GAGE2BQ13066 116 aa10.52□□□□□ -0.73
RETREG3-208ENST00000589797 GAGE2EQ4V326 116 aa10.52□□□□□ -0.73
RETREG3-208ENST00000589797 GAGE2DQ9UEU5 116 aa10.52□□□□□ -0.73
RETREG3-208ENST00000589797 COX7A2LO14548 114 aa10.52□□□□□ -0.73
RETREG3-208ENST00000589797 IGLV1-51P01701 117 aa10.52□□□□□ -0.73
RETREG3-208ENST00000589797 CELSR1Q9NYQ6 3014 aa10.51□□□□□ -0.73
RETREG3-208ENST00000589797 PSCAO43653 123 aa10.51□□□□□ -0.73
RETREG3-208ENST00000589797 TRBV6-8A0A0A6YYG3 113 aa10.51□□□□□ -0.73
RETREG3-208ENST00000589797 POM121L12Q8N7R1 296 aa10.51□□□□□ -0.73
RETREG3-208ENST00000589797 ICOSQ9Y6W8 199 aa10.51□□□□□ -0.73
RETREG3-208ENST00000589797 IGLV4-69A0A075B6H9 119 aa10.51□□□□□ -0.73
RETREG3-208ENST00000589797 PRSS47A8MTI9 375 aa10.5□□□□□ -0.73
RETREG3-208ENST00000589797 INSL3P51460 131 aa10.5□□□□□ -0.73
RETREG3-208ENST00000589797 APCP25054 2843 aa10.5□□□□□ -0.73
RETREG3-208ENST00000589797 IGHV4-28A0A0C4DH34 117 aa10.5□□□□□ -0.73
RETREG3-208ENST00000589797 LINC01620Q4KN68 170 aa10.49□□□□□ -0.73
RETREG3-208ENST00000589797 HIGD2BQ4VC39 106 aa10.49□□□□□ -0.73
RETREG3-208ENST00000589797 RETNQ9HD89 108 aa10.48□□□□□ -0.73
RETREG3-208ENST00000589797 RBX1P62877 108 aa10.48□□□□□ -0.73
RETREG3-208ENST00000589797 COX6A2Q02221 97 aa10.48□□□□□ -0.73
RETREG3-208ENST00000589797 ANKRD29Q8N6D5 301 aa10.48□□□□□ -0.73
RETREG3-208ENST00000589797 BAALC-AS2P0C853 105 aa10.47□□□□□ -0.73
RETREG3-208ENST00000589797 ANAPC13Q9BS18 74 aa10.47□□□□□ -0.73
RETREG3-208ENST00000589797 IGLV4-60A0A075B6I1 120 aa10.46□□□□□ -0.74
RETREG3-208ENST00000589797 TRAV13-2A0A0B4J235 113 aa10.46□□□□□ -0.74
RETREG3-208ENST00000589797 TRBV6-4A0A1B0GX49 114 aa10.46□□□□□ -0.74
RETREG3-208ENST00000589797 HIST1H4AP62805 103 aaKnown RBP10.46□□□□□ -0.74
RETREG3-208ENST00000589797 NSD1Q96L73 2696 aaPredicted RBP10.46□□□□□ -0.74
RETREG3-208ENST00000589797 A0A096LNT2 108 aa10.46□□□□□ -0.74
RETREG3-208ENST00000589797 MIAQ16674 131 aa10.46□□□□□ -0.74
RETREG3-208ENST00000589797 CHCHD7Q9BUK0 85 aa10.46□□□□□ -0.74
RETREG3-208ENST00000589797 C1orf43Q9BWL3 253 aa10.46□□□□□ -0.74
RETREG3-208ENST00000589797 LINC00242Q5T6M2 205 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 FAM19A4Q96LR4 140 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 NCR3O14931 201 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 IGHV4-30-4P0DP06 118 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 IFITM1P13164 125 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 HERV-K104P63124 156 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 REG3AQ06141 175 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 CAMK2N2Q96S95 79 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 PYGO1Q9Y3Y4 419 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 SPAG11BQ08648 103 aa10.45□□□□□ -0.74
RETREG3-208ENST00000589797 NIPBLQ6KC79 2804 aaeCLIP10.44□□□□□ -0.74
RETREG3-208ENST00000589797 RPL32P62910 135 aaKnown RBP10.44□□□□□ -0.74
RETREG3-208ENST00000589797 ZFAND6Q6FIF0 208 aa10.44□□□□□ -0.74
RETREG3-208ENST00000589797 UBE2D3P61077 147 aa10.44□□□□□ -0.74
RETREG3-208ENST00000589797 UBE2D2P62837 147 aa10.44□□□□□ -0.74
RETREG3-208ENST00000589797 UBE2D1P51668 147 aa10.43□□□□□ -0.74
RETREG3-208ENST00000589797 CHCHD10Q8WYQ3 142 aaPredicted RBP10.43□□□□□ -0.74
RETREG3-208ENST00000589797 XAGE1AQ9HD64 81 aa10.43□□□□□ -0.74
RETREG3-208ENST00000589797 TRIAP1O43715 76 aa10.43□□□□□ -0.74
RETREG3-208ENST00000589797 TEN1Q86WV5 123 aa10.43□□□□□ -0.74
RETREG3-208ENST00000589797 LECT2O14960 151 aa10.43□□□□□ -0.74
RETREG3-208ENST00000589797 ADAMTSL4-AS1Q5T5F5 129 aa10.43□□□□□ -0.74
RETREG3-208ENST00000589797 LINC00308Q8TCZ7 52 aa10.43□□□□□ -0.74
RETREG3-208ENST00000589797 CLUHP3Q96NS8 147 aa10.43□□□□□ -0.74
RETREG3-208ENST00000589797 CDC42SE2Q9NRR3 84 aa10.43□□□□□ -0.74
RETREG3-208ENST00000589797 FOXI1Q12951 378 aa10.42□□□□□ -0.74
RETREG3-208ENST00000589797 C11orf72Q8NBR9 251 aa10.42□□□□□ -0.74
RETREG3-208ENST00000589797 BAHCC1Q9P281 2608 aa10.42□□□□□ -0.74
RETREG3-208ENST00000589797 TEX49A0A1B0GTD5 131 aa10.42□□□□□ -0.74
RETREG3-208ENST00000589797 MRPS36P82909 103 aaKnown RBP10.42□□□□□ -0.74
RETREG3-208ENST00000589797 C15orf53Q8NAA6 179 aa10.42□□□□□ -0.74
RETREG3-208ENST00000589797 Q8N2B8 174 aa10.41□□□□□ -0.74
RETREG3-208ENST00000589797 FSHBP01225 129 aa10.41□□□□□ -0.74
RETREG3-208ENST00000589797 MXRA5Q9NR99 2828 aa10.4□□□□□ -0.74
RETREG3-208ENST00000589797 SLPIP03973 132 aa10.4□□□□□ -0.74
RETREG3-208ENST00000589797 C11orf45Q8TAV5 145 aa10.4□□□□□ -0.74
RETREG3-208ENST00000589797 G3V4G9 280 aa10.39□□□□□ -0.75
RETREG3-208ENST00000589797 DEFB105AQ8NG35 78 aa10.39□□□□□ -0.75
RETREG3-208ENST00000589797 TIRAPP58753 221 aa10.39□□□□□ -0.75
RETREG3-208ENST00000589797 DEFB131BA0A096LNP1 70 aa10.38□□□□□ -0.75
RETREG3-208ENST00000589797 RPL18AQ02543 176 aaKnown RBP10.38□□□□□ -0.75
RETREG3-208ENST00000589797 FHL2Q14192 279 aa10.38□□□□□ -0.75
RETREG3-208ENST00000589797 LYRM9A8MSI8 78 aa10.38□□□□□ -0.75
RETREG3-208ENST00000589797 NKAPP1Q8N9T2 125 aa10.38□□□□□ -0.75
RETREG3-208ENST00000589797 LINC00959A0A1B0GUT2 108 aa10.38□□□□□ -0.75
RETREG3-208ENST00000589797 C9orf116Q5BN46 136 aaPredicted RBP10.38□□□□□ -0.75
RETREG3-208ENST00000589797 SMIM9A6NGZ8 99 aa10.37□□□□□ -0.75
RETREG3-208ENST00000589797 NTM-AS1Q6ZSK4 140 aa10.37□□□□□ -0.75
RETREG3-208ENST00000589797 ZNF575Q86XF7 245 aa10.37□□□□□ -0.75
RETREG3-208ENST00000589797 SPANXB1Q9NS25 103 aaPredicted RBP10.37□□□□□ -0.75
RETREG3-208ENST00000589797 BEAN1Q3B7T3 259 aa10.36□□□□□ -0.75
RETREG3-208ENST00000589797 NDUFA1O15239 70 aa10.36□□□□□ -0.75
RETREG3-208ENST00000589797 PRR3P79522 188 aaKnown RBP10.36□□□□□ -0.75
RETREG3-208ENST00000589797 KLK9Q2XQG4 91 aa10.36□□□□□ -0.75
RETREG3-208ENST00000589797 NANOS2P60321 138 aaKnown RBP10.35□□□□□ -0.75
RETREG3-208ENST00000589797 C16orf95Q9H693 158 aa10.35□□□□□ -0.75
RETREG3-208ENST00000589797 SMIM1B2RUZ4 78 aa10.35□□□□□ -0.75
RETREG3-208ENST00000589797 CCL18P55774 89 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms