RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 IFITM10A6NMD0 228 aa10.23□□□□□ -0.77
LINC01842-201ENST00000588275 C20orf78Q9BR46 151 aa10.23□□□□□ -0.77
LINC01842-201ENST00000588275 LINC00862A6NCI5 91 aa10.22□□□□□ -0.77
LINC01842-201ENST00000588275 TNFRSF6BO95407 300 aa10.22□□□□□ -0.77
LINC01842-201ENST00000588275 RPL23P62829 140 aaKnown RBP10.22□□□□□ -0.77
LINC01842-201ENST00000588275 TMEM241Q24JQ0 296 aa10.22□□□□□ -0.77
LINC01842-201ENST00000588275 GAGE2EQ4V326 116 aa10.22□□□□□ -0.77
LINC01842-201ENST00000588275 FAM74A3Q4VXF1 159 aa10.22□□□□□ -0.77
LINC01842-201ENST00000588275 C10orf25Q5T742 122 aa10.22□□□□□ -0.77
LINC01842-201ENST00000588275 SMIM2Q9BVW6 85 aa10.22□□□□□ -0.77
LINC01842-201ENST00000588275 GAGE2DQ9UEU5 116 aa10.22□□□□□ -0.77
LINC01842-201ENST00000588275 TCAPO15273 167 aa10.21□□□□□ -0.77
LINC01842-201ENST00000588275 HBBP68871 147 aa10.21□□□□□ -0.77
LINC01842-201ENST00000588275 UNQ6190/PRO20217Q6UXQ8 127 aa10.21□□□□□ -0.77
LINC01842-201ENST00000588275 SPANXA1Q9NS26 97 aa10.21□□□□□ -0.77
LINC01842-201ENST00000588275 IGHV3OR16-9A0A0B4J2B5 98 aa10.2□□□□□ -0.78
LINC01842-201ENST00000588275 D6R8Y8 96 aa10.2□□□□□ -0.78
LINC01842-201ENST00000588275 MRPL54Q6P161 138 aaKnown RBP10.2□□□□□ -0.78
LINC01842-201ENST00000588275 KRTAP11-1Q8IUC1 163 aa10.2□□□□□ -0.78
LINC01842-201ENST00000588275 C6orf48Q9UBA6 75 aa10.2□□□□□ -0.78
LINC01842-201ENST00000588275 TRBV24-1A0A075B6N3 115 aa10.19□□□□□ -0.78
LINC01842-201ENST00000588275 TGIF2-C20orf24A0A0A6YYL0 155 aa10.19□□□□□ -0.78
LINC01842-201ENST00000588275 SMIM27A0A1W2PRY6 76 aa10.19□□□□□ -0.78
LINC01842-201ENST00000588275 F8WDY8 70 aa10.19□□□□□ -0.78
LINC01842-201ENST00000588275 H0Y9J4 135 aa10.19□□□□□ -0.78
LINC01842-201ENST00000588275 RPL32P62910 135 aaKnown RBP10.19□□□□□ -0.78
LINC01842-201ENST00000588275 UBE2BP63146 152 aa10.19□□□□□ -0.78
LINC01842-201ENST00000588275 FAM104AQ969W3 186 aa10.19□□□□□ -0.78
LINC01842-201ENST00000588275 A0A1B0GW15 77 aa10.18□□□□□ -0.78
LINC01842-201ENST00000588275 NPYP01303 97 aa10.18□□□□□ -0.78
LINC01842-201ENST00000588275 MRPS36P82909 103 aaKnown RBP10.18□□□□□ -0.78
LINC01842-201ENST00000588275 NAT8Q9UHE5 227 aa10.18□□□□□ -0.78
LINC01842-201ENST00000588275 M0QXV9 152 aa10.17□□□□□ -0.78
LINC01842-201ENST00000588275 TLX1NBP0CAT3 122 aa10.17□□□□□ -0.78
LINC01842-201ENST00000588275 SMDT1Q9H4I9 107 aa10.17□□□□□ -0.78
LINC01842-201ENST00000588275 F8W036 122 aa10.16□□□□□ -0.78
LINC01842-201ENST00000588275 IFI27P40305 119 aaPredicted RBP10.16□□□□□ -0.78
LINC01842-201ENST00000588275 S100A8P05109 93 aa10.15□□□□□ -0.78
LINC01842-201ENST00000588275 UBE2D1P51668 147 aa10.15□□□□□ -0.78
LINC01842-201ENST00000588275 C9JQL5 133 aa10.14□□□□□ -0.79
LINC01842-201ENST00000588275 RAB5AP20339 215 aa10.14□□□□□ -0.79
LINC01842-201ENST00000588275 C2orf82Q6UX34 121 aa10.14□□□□□ -0.79
LINC01842-201ENST00000588275 IGLV1-50A0A075B6I6 118 aa10.13□□□□□ -0.79
LINC01842-201ENST00000588275 KRTAP7-1Q8IUC3 87 aa10.13□□□□□ -0.79
LINC01842-201ENST00000588275 PACRGQ96M98 296 aaPredicted RBP10.13□□□□□ -0.79
LINC01842-201ENST00000588275 PPBPP02775 128 aa10.12□□□□□ -0.79
LINC01842-201ENST00000588275 SRSF3P84103 164 aaKnown RBP10.12□□□□□ -0.79
LINC01842-201ENST00000588275 KIAA0087Q14695 138 aa10.12□□□□□ -0.79
LINC01842-201ENST00000588275 LINC00242Q5T6M2 205 aa10.12□□□□□ -0.79
LINC01842-201ENST00000588275 IGLV4-3A0A075B6K6 122 aa10.11□□□□□ -0.79
LINC01842-201ENST00000588275 TRBV30A0A0K0K1B3 111 aa10.11□□□□□ -0.79
LINC01842-201ENST00000588275 A0A1B0GXF2 115 aa10.11□□□□□ -0.79
LINC01842-201ENST00000588275 KRTAP1-4P0C5Y4 121 aa10.11□□□□□ -0.79
LINC01842-201ENST00000588275 PRR4Q16378 134 aa10.11□□□□□ -0.79
LINC01842-201ENST00000588275 ORMDL3Q8N138 153 aa10.11□□□□□ -0.79
LINC01842-201ENST00000588275 PRELID3AQ96N28 172 aa10.11□□□□□ -0.79
LINC01842-201ENST00000588275 NDUFC2-KCTD14E9PQ53 114 aa10.1□□□□□ -0.79
LINC01842-201ENST00000588275 PEA15Q15121 130 aa10.1□□□□□ -0.79
LINC01842-201ENST00000588275 C9orf129Q5T035 196 aaKnown RBP10.1□□□□□ -0.79
LINC01842-201ENST00000588275 TEX43Q6ZNM6 134 aa10.1□□□□□ -0.79
LINC01842-201ENST00000588275 TMEM136Q6ZRR5 245 aa10.1□□□□□ -0.79
LINC01842-201ENST00000588275 TMEM141Q96I45 108 aa10.1□□□□□ -0.79
LINC01842-201ENST00000588275 LOC389332A0A1B0GUA5 103 aa10.09□□□□□ -0.79
LINC01842-201ENST00000588275 TOMM7Q9P0U1 55 aa10.09□□□□□ -0.79
LINC01842-201ENST00000588275 PYGO1Q9Y3Y4 419 aa10.09□□□□□ -0.79
LINC01842-201ENST00000588275 RPL13AP40429 203 aaKnown RBP10.08□□□□□ -0.8
LINC01842-201ENST00000588275 ZC2HC1BQ5TFG8 222 aa10.08□□□□□ -0.8
LINC01842-201ENST00000588275 C2orf88Q9BSF0 95 aa10.08□□□□□ -0.8
LINC01842-201ENST00000588275 PRSS2P07478 247 aa10.07□□□□□ -0.8
LINC01842-201ENST00000588275 LINC00469Q8N7U9 141 aa10.07□□□□□ -0.8
LINC01842-201ENST00000588275 Q6ZN92 141 aa10.06□□□□□ -0.8
LINC01842-201ENST00000588275 CKS1BP61024 79 aa10.05□□□□□ -0.8
LINC01842-201ENST00000588275 ATP5L2Q7Z4Y8 100 aa10.05□□□□□ -0.8
LINC01842-201ENST00000588275 MAP1LC3AQ9H492 121 aa10.05□□□□□ -0.8
LINC01842-201ENST00000588275 CYSLTR1Q9Y271 337 aa10.05□□□□□ -0.8
LINC01842-201ENST00000588275 C2orf66Q6UXQ4 117 aa10.04□□□□□ -0.8
LINC01842-201ENST00000588275 ZNF861PO60384 105 aa10.03□□□□□ -0.8
LINC01842-201ENST00000588275 C6orf226Q5I0X4 101 aa10.03□□□□□ -0.8
LINC01842-201ENST00000588275 LINC01561Q8N1V8 128 aa10.03□□□□□ -0.8
LINC01842-201ENST00000588275 VCX2Q9H322 139 aa10.03□□□□□ -0.8
LINC01842-201ENST00000588275 XAGE1AQ9HD64 81 aa10.03□□□□□ -0.8
LINC01842-201ENST00000588275 LINC00173Q6ZV60 143 aa10.02□□□□□ -0.81
LINC01842-201ENST00000588275 C22orf24Q9Y442 160 aa10.02□□□□□ -0.81
LINC01842-201ENST00000588275 TSPAN13O95857 204 aa10.01□□□□□ -0.81
LINC01842-201ENST00000588275 ALKBH7Q9BT30 221 aaPredicted RBP10.01□□□□□ -0.81
LINC01842-201ENST00000588275 LAMTOR2Q9Y2Q5 125 aa10.01□□□□□ -0.81
LINC01842-201ENST00000588275 CARHSP1Q9Y2V2 147 aaKnown RBP10.01□□□□□ -0.81
LINC01842-201ENST00000588275 MUC2Q02817 5179 aa10.01□□□□□ -0.81
LINC01842-201ENST00000588275 NUPR1O60356 82 aa10□□□□□ -0.81
LINC01842-201ENST00000588275 Q8IZM0 81 aa10□□□□□ -0.81
LINC01842-201ENST00000588275 Q8N8P6 123 aa10□□□□□ -0.81
LINC01842-201ENST00000588275 AMELXQ99217 191 aa10□□□□□ -0.81
LINC01842-201ENST00000588275 CTDSP1Q9GZU7 261 aa10□□□□□ -0.81
LINC01842-201ENST00000588275 PRSS47A8MTI9 375 aa9.99□□□□□ -0.81
LINC01842-201ENST00000588275 ORMDL2Q53FV1 153 aa9.99□□□□□ -0.81
LINC01842-201ENST00000588275 LBHQ53QV2 105 aaPredicted RBP9.99□□□□□ -0.81
LINC01842-201ENST00000588275 A0A1B0GVG6 124 aa9.96□□□□□ -0.82
LINC01842-201ENST00000588275 HERVK_113P63121 156 aa9.96□□□□□ -0.82
LINC01842-201ENST00000588275 MRPL55Q7Z7F7 128 aaKnown RBP9.96□□□□□ -0.82
LINC01842-201ENST00000588275 GEMIN7Q9H840 131 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms