RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 C9orf129Q5T035 196 aaKnown RBP8.18□□□□□ -1.1
CLPTM1-208ENST00000588274 BORCS7Q96B45 105 aa8.18□□□□□ -1.1
CLPTM1-208ENST00000588274 KIR2DL4Q99706 377 aa8.18□□□□□ -1.1
CLPTM1-208ENST00000588274 V9GYV3 84 aa8.18□□□□□ -1.1
CLPTM1-208ENST00000588274 RPL13AP40429 203 aaKnown RBP8.17□□□□□ -1.1
CLPTM1-208ENST00000588274 RPL32P62910 135 aaKnown RBP8.17□□□□□ -1.1
CLPTM1-208ENST00000588274 MRPL51Q4U2R6 128 aaKnown RBP8.17□□□□□ -1.1
CLPTM1-208ENST00000588274 AKAP14Q86UN6 197 aa8.17□□□□□ -1.1
CLPTM1-208ENST00000588274 OSTCQ9NRP0 149 aa8.17□□□□□ -1.1
CLPTM1-208ENST00000588274 TRBV24-1A0A075B6N3 115 aa8.16□□□□□ -1.1
CLPTM1-208ENST00000588274 ATP6V1G1O75348 118 aa8.16□□□□□ -1.1
CLPTM1-208ENST00000588274 MRPS36P82909 103 aaKnown RBP8.16□□□□□ -1.1
CLPTM1-208ENST00000588274 TCTE3Q8IZS6 198 aa8.16□□□□□ -1.1
CLPTM1-208ENST00000588274 KRTAP9-6A0A140TA67 174 aa8.15□□□□□ -1.1
CLPTM1-208ENST00000588274 PPP1R2P9O14990 202 aa8.15□□□□□ -1.1
CLPTM1-208ENST00000588274 PPP1R17O96001 155 aa8.15□□□□□ -1.1
CLPTM1-208ENST00000588274 UBE2D1P51668 147 aa8.15□□□□□ -1.1
CLPTM1-208ENST00000588274 SMAGPQ0VAQ4 97 aa8.15□□□□□ -1.1
CLPTM1-208ENST00000588274 TMEM241Q24JQ0 296 aa8.15□□□□□ -1.1
CLPTM1-208ENST00000588274 GAGE2EQ4V326 116 aa8.15□□□□□ -1.1
CLPTM1-208ENST00000588274 FAM104BQ5XKR9 115 aa8.15□□□□□ -1.1
CLPTM1-208ENST00000588274 SMIM7Q9BQ49 75 aa8.15□□□□□ -1.1
CLPTM1-208ENST00000588274 SPANXA1Q9NS26 97 aa8.15□□□□□ -1.1
CLPTM1-208ENST00000588274 GAGE2DQ9UEU5 116 aa8.15□□□□□ -1.1
CLPTM1-208ENST00000588274 CARHSP1Q9Y2V2 147 aaKnown RBP8.15□□□□□ -1.1
CLPTM1-208ENST00000588274 A0A087X002 238 aa8.14□□□□□ -1.11
CLPTM1-208ENST00000588274 A0A0U1RQV1 116 aa8.14□□□□□ -1.11
CLPTM1-208ENST00000588274 C20orf78Q9BR46 151 aa8.14□□□□□ -1.11
CLPTM1-208ENST00000588274 CEBPGP53567 150 aa8.13□□□□□ -1.11
CLPTM1-208ENST00000588274 RIGQ13278 110 aa8.13□□□□□ -1.11
CLPTM1-208ENST00000588274 C2orf82Q6UX34 121 aa8.13□□□□□ -1.11
CLPTM1-208ENST00000588274 ALKAL2Q6UX46 152 aa8.13□□□□□ -1.11
CLPTM1-208ENST00000588274 SMIM2Q9BVW6 85 aa8.13□□□□□ -1.11
CLPTM1-208ENST00000588274 IFITM10A6NMD0 228 aa8.12□□□□□ -1.11
CLPTM1-208ENST00000588274 NDUFC2-KCTD14E9PQ53 114 aa8.12□□□□□ -1.11
CLPTM1-208ENST00000588274 ZNF861PO60384 105 aa8.12□□□□□ -1.11
CLPTM1-208ENST00000588274 UBE2BP63146 152 aa8.12□□□□□ -1.11
CLPTM1-208ENST00000588274 LINC00242Q5T6M2 205 aa8.12□□□□□ -1.11
CLPTM1-208ENST00000588274 TMEM18Q96B42 140 aa8.12□□□□□ -1.11
CLPTM1-208ENST00000588274 TRBV30A0A0K0K1B3 111 aa8.11□□□□□ -1.11
CLPTM1-208ENST00000588274 LINC00862A6NCI5 91 aa8.11□□□□□ -1.11
CLPTM1-208ENST00000588274 TNFRSF6BO95407 300 aa8.11□□□□□ -1.11
CLPTM1-208ENST00000588274 HBBP68871 147 aa8.11□□□□□ -1.11
CLPTM1-208ENST00000588274 NPYP01303 97 aa8.1□□□□□ -1.11
CLPTM1-208ENST00000588274 SRP19P09132 144 aaKnown RBP8.1□□□□□ -1.11
CLPTM1-208ENST00000588274 NAT8BQ9UHF3 227 aa8.1□□□□□ -1.11
CLPTM1-208ENST00000588274 SMIM27A0A1W2PRY6 76 aa8.09□□□□□ -1.11
CLPTM1-208ENST00000588274 ZNF727A8MUV8 499 aa8.09□□□□□ -1.11
CLPTM1-208ENST00000588274 TCAPO15273 167 aa8.09□□□□□ -1.11
CLPTM1-208ENST00000588274 TSPAN13O95857 204 aa8.09□□□□□ -1.11
CLPTM1-208ENST00000588274 BLOC1S1P78537 153 aa8.09□□□□□ -1.11
CLPTM1-208ENST00000588274 FAM74A3Q4VXF1 159 aa8.09□□□□□ -1.11
CLPTM1-208ENST00000588274 IGLV4-3A0A075B6K6 122 aa8.08□□□□□ -1.12
CLPTM1-208ENST00000588274 TGIF2-C20orf24A0A0A6YYL0 155 aa8.08□□□□□ -1.12
CLPTM1-208ENST00000588274 D6R8Y8 96 aa8.08□□□□□ -1.12
CLPTM1-208ENST00000588274 S100A1P23297 94 aa8.08□□□□□ -1.12
CLPTM1-208ENST00000588274 A0A1B0GXF2 115 aa8.07□□□□□ -1.12
CLPTM1-208ENST00000588274 CKS2P33552 79 aa8.07□□□□□ -1.12
CLPTM1-208ENST00000588274 RPL23P62829 140 aaKnown RBP8.07□□□□□ -1.12
CLPTM1-208ENST00000588274 LINC00173Q6ZV60 143 aa8.07□□□□□ -1.12
CLPTM1-208ENST00000588274 PYGO1Q9Y3Y4 419 aa8.07□□□□□ -1.12
CLPTM1-208ENST00000588274 NUPR1O60356 82 aa8.06□□□□□ -1.12
CLPTM1-208ENST00000588274 C22orf24Q9Y442 160 aa8.06□□□□□ -1.12
CLPTM1-208ENST00000588274 KRTAP13-2Q52LG2 175 aa8.05□□□□□ -1.12
CLPTM1-208ENST00000588274 LINC01561Q8N1V8 128 aa8.05□□□□□ -1.12
CLPTM1-208ENST00000588274 CTDSP1Q9GZU7 261 aa8.05□□□□□ -1.12
CLPTM1-208ENST00000588274 EIF5A2Q9GZV4 153 aaKnown RBP8.05□□□□□ -1.12
CLPTM1-208ENST00000588274 A0A1B0GW15 77 aa8.04□□□□□ -1.12
CLPTM1-208ENST00000588274 C9JQL5 133 aa8.04□□□□□ -1.12
CLPTM1-208ENST00000588274 ZC2HC1BQ5TFG8 222 aa8.04□□□□□ -1.12
CLPTM1-208ENST00000588274 LINC00469Q8N7U9 141 aa8.04□□□□□ -1.12
CLPTM1-208ENST00000588274 IFI27P40305 119 aaPredicted RBP8.03□□□□□ -1.12
CLPTM1-208ENST00000588274 KRTAP13-1Q8IUC0 172 aa8.03□□□□□ -1.12
CLPTM1-208ENST00000588274 PACRGQ96M98 296 aaPredicted RBP8.03□□□□□ -1.12
CLPTM1-208ENST00000588274 XAGE1AQ9HD64 81 aa8.03□□□□□ -1.12
CLPTM1-208ENST00000588274 NDUFA5Q16718 116 aa8.02□□□□□ -1.13
CLPTM1-208ENST00000588274 MRPL54Q6P161 138 aaKnown RBP8.02□□□□□ -1.13
CLPTM1-208ENST00000588274 TMEM141Q96I45 108 aa8.02□□□□□ -1.13
CLPTM1-208ENST00000588274 AMELXQ99217 191 aa8.02□□□□□ -1.13
CLPTM1-208ENST00000588274 RETNLBQ9BQ08 111 aa8.02□□□□□ -1.13
CLPTM1-208ENST00000588274 ANAPC11Q9NYG5 84 aa8.02□□□□□ -1.13
CLPTM1-208ENST00000588274 TP73-AS1Q9UF72 201 aa8.02□□□□□ -1.13
CLPTM1-208ENST00000588274 BCE1O60756 84 aa8.01□□□□□ -1.13
CLPTM1-208ENST00000588274 ADIRFQ15847 76 aa8.01□□□□□ -1.13
CLPTM1-208ENST00000588274 FAM19A3Q7Z5A8 133 aa8.01□□□□□ -1.13
CLPTM1-208ENST00000588274 TYMSOSQ8TAI1 123 aa8.01□□□□□ -1.13
CLPTM1-208ENST00000588274 FSIP2Q5CZC0 6907 aa8.01□□□□□ -1.13
CLPTM1-208ENST00000588274 PRSS47A8MTI9 375 aa8□□□□□ -1.13
CLPTM1-208ENST00000588274 PPBPP02775 128 aa8□□□□□ -1.13
CLPTM1-208ENST00000588274 CRYGAP11844 174 aa8□□□□□ -1.13
CLPTM1-208ENST00000588274 TPRXLQ17RH7 258 aa8□□□□□ -1.13
CLPTM1-208ENST00000588274 MRPL55Q7Z7F7 128 aaKnown RBP8□□□□□ -1.13
CLPTM1-208ENST00000588274 Q8IZM0 81 aa8□□□□□ -1.13
CLPTM1-208ENST00000588274 SRSF3P84103 164 aaKnown RBP7.99□□□□□ -1.13
CLPTM1-208ENST00000588274 TEX43Q6ZNM6 134 aa7.99□□□□□ -1.13
CLPTM1-208ENST00000588274 ORMDL3Q8N138 153 aa7.99□□□□□ -1.13
CLPTM1-208ENST00000588274 NAT8Q9UHE5 227 aa7.99□□□□□ -1.13
CLPTM1-208ENST00000588274 RPL28P46779 137 aaKnown RBP7.98□□□□□ -1.13
CLPTM1-208ENST00000588274 LBHQ53QV2 105 aaPredicted RBP7.98□□□□□ -1.13
CLPTM1-208ENST00000588274 IGIPA6NJ69 53 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms