RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 LOC107984640A0A0U1RRK4 108 aa9.78□□□□□ -0.84
VAT1-205ENST00000587173 MT-ND6P03923 174 aa9.78□□□□□ -0.84
VAT1-205ENST00000587173 ODF1Q14990 250 aa9.78□□□□□ -0.84
VAT1-205ENST00000587173 REG3GQ6UW15 175 aa9.78□□□□□ -0.84
VAT1-205ENST00000587173 Q6ZRP5 223 aa9.78□□□□□ -0.84
VAT1-205ENST00000587173 ORMDL3Q8N138 153 aa9.78□□□□□ -0.84
VAT1-205ENST00000587173 NRACQ8N912 160 aa9.78□□□□□ -0.84
VAT1-205ENST00000587173 GNB1LQ9BYB4 327 aa9.78□□□□□ -0.84
VAT1-205ENST00000587173 UBE2D4Q9Y2X8 147 aa9.78□□□□□ -0.84
VAT1-205ENST00000587173 IGLV4-69A0A075B6H9 119 aa9.77□□□□□ -0.85
VAT1-205ENST00000587173 TRBV24-1A0A075B6N3 115 aa9.77□□□□□ -0.85
VAT1-205ENST00000587173 TRAV13-1A0A0B4J241 112 aa9.77□□□□□ -0.85
VAT1-205ENST00000587173 A0A0J9YXV3 536 aa9.77□□□□□ -0.85
VAT1-205ENST00000587173 D6R8Y8 96 aa9.77□□□□□ -0.85
VAT1-205ENST00000587173 APOMO95445 188 aa9.77□□□□□ -0.85
VAT1-205ENST00000587173 GAGE2BQ13066 116 aa9.77□□□□□ -0.85
VAT1-205ENST00000587173 TMEM136Q6ZRR5 245 aa9.77□□□□□ -0.85
VAT1-205ENST00000587173 CAMK2N2Q96S95 79 aa9.77□□□□□ -0.85
VAT1-205ENST00000587173 C20orf78Q9BR46 151 aa9.77□□□□□ -0.85
VAT1-205ENST00000587173 LAMTOR2Q9Y2Q5 125 aa9.77□□□□□ -0.85
VAT1-205ENST00000587173 TCAPO15273 167 aa9.76□□□□□ -0.85
VAT1-205ENST00000587173 ATP6V1G1O75348 118 aa9.76□□□□□ -0.85
VAT1-205ENST00000587173 PTTG1IPP53801 180 aa9.76□□□□□ -0.85
VAT1-205ENST00000587173 TGIF2-C20orf24A0A0A6YYL0 155 aa9.75□□□□□ -0.85
VAT1-205ENST00000587173 RNASE13Q5GAN3 156 aaKnown RBP9.75□□□□□ -0.85
VAT1-205ENST00000587173 C5orf38Q86SI9 138 aa9.75□□□□□ -0.85
VAT1-205ENST00000587173 C2orf48Q96LS8 159 aa9.75□□□□□ -0.85
VAT1-205ENST00000587173 PRELID3AQ96N28 172 aa9.75□□□□□ -0.85
VAT1-205ENST00000587173 TIMM21Q9BVV7 248 aa9.75□□□□□ -0.85
VAT1-205ENST00000587173 TNFRSF6BO95407 300 aa9.74□□□□□ -0.85
VAT1-205ENST00000587173 S100A1P23297 94 aa9.74□□□□□ -0.85
VAT1-205ENST00000587173 CBLN2Q8IUK8 224 aa9.74□□□□□ -0.85
VAT1-205ENST00000587173 KRTAP10-8P60410 259 aa9.73□□□□□ -0.85
VAT1-205ENST00000587173 FABP9Q0Z7S8 132 aa9.73□□□□□ -0.85
VAT1-205ENST00000587173 RPL32P62910 135 aaKnown RBP9.72□□□□□ -0.85
VAT1-205ENST00000587173 SRSF9Q13242 221 aaKnown RBP eCLIP9.72□□□□□ -0.85
VAT1-205ENST00000587173 Q6ZUT4 128 aa9.72□□□□□ -0.85
VAT1-205ENST00000587173 MRPL18Q9H0U6 180 aaKnown RBP9.72□□□□□ -0.85
VAT1-205ENST00000587173 MAP1LC3AQ9H492 121 aa9.72□□□□□ -0.85
VAT1-205ENST00000587173 TRAPPC1Q9Y5R8 145 aa9.72□□□□□ -0.85
VAT1-205ENST00000587173 NPYP01303 97 aa9.71□□□□□ -0.86
VAT1-205ENST00000587173 SPAG11BQ08648 103 aa9.71□□□□□ -0.86
VAT1-205ENST00000587173 A0A1W2PNN7 141 aa9.7□□□□□ -0.86
VAT1-205ENST00000587173 RPL18AQ02543 176 aaKnown RBP9.7□□□□□ -0.86
VAT1-205ENST00000587173 RNF151Q2KHN1 245 aa9.7□□□□□ -0.86
VAT1-205ENST00000587173 OR10D4PQ8NGN7 298 aa9.7□□□□□ -0.86
VAT1-205ENST00000587173 YPEL4Q96NS1 127 aa9.7□□□□□ -0.86
VAT1-205ENST00000587173 SMIM2Q9BVW6 85 aa9.7□□□□□ -0.86
VAT1-205ENST00000587173 F8WDY8 70 aa9.69□□□□□ -0.86
VAT1-205ENST00000587173 RAB5AP20339 215 aa9.69□□□□□ -0.86
VAT1-205ENST00000587173 KIAA1644Q3SXP7 199 aa9.69□□□□□ -0.86
VAT1-205ENST00000587173 C9orf116Q5BN46 136 aaPredicted RBP9.69□□□□□ -0.86
VAT1-205ENST00000587173 SPANXA1Q9NS26 97 aa9.69□□□□□ -0.86
VAT1-205ENST00000587173 PRSS47A8MTI9 375 aa9.68□□□□□ -0.86
VAT1-205ENST00000587173 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.68□□□□□ -0.86
VAT1-205ENST00000587173 RPL39P62891 51 aaKnown RBP9.68□□□□□ -0.86
VAT1-205ENST00000587173 ORAOV1Q8WV07 137 aa9.68□□□□□ -0.86
VAT1-205ENST00000587173 OPRPNQ99935 248 aaPredicted RBP9.68□□□□□ -0.86
VAT1-205ENST00000587173 NXT2Q9NPJ8 142 aaKnown RBP9.68□□□□□ -0.86
VAT1-205ENST00000587173 LOC389332A0A1B0GUA5 103 aa9.67□□□□□ -0.86
VAT1-205ENST00000587173 MRPS36P82909 103 aaKnown RBP9.67□□□□□ -0.86
VAT1-205ENST00000587173 ALKBH7Q9BT30 221 aaPredicted RBP9.67□□□□□ -0.86
VAT1-205ENST00000587173 RNF213Q63HN8 5207 aa9.66□□□□□ -0.86
VAT1-205ENST00000587173 IFITM10A6NMD0 228 aa9.66□□□□□ -0.86
VAT1-205ENST00000587173 K7EMI3 77 aa9.66□□□□□ -0.86
VAT1-205ENST00000587173 NDUFA1O15239 70 aa9.66□□□□□ -0.86
VAT1-205ENST00000587173 Q8N8P6 123 aa9.66□□□□□ -0.86
VAT1-205ENST00000587173 MRPL35Q9NZE8 188 aaKnown RBP9.66□□□□□ -0.86
VAT1-205ENST00000587173 PSORS1C2Q9UIG4 136 aa9.66□□□□□ -0.86
VAT1-205ENST00000587173 IGHV3OR16-9A0A0B4J2B5 98 aa9.65□□□□□ -0.86
VAT1-205ENST00000587173 G0S2P27469 103 aa9.64□□□□□ -0.87
VAT1-205ENST00000587173 IFI27P40305 119 aaPredicted RBP9.64□□□□□ -0.87
VAT1-205ENST00000587173 C1orf137Q5JT78 98 aa9.64□□□□□ -0.87
VAT1-205ENST00000587173 PHF5AQ7RTV0 110 aaKnown RBP9.64□□□□□ -0.87
VAT1-205ENST00000587173 COLCA2A8K830 154 aa9.63□□□□□ -0.87
VAT1-205ENST00000587173 SCO1O75880 301 aa9.63□□□□□ -0.87
VAT1-205ENST00000587173 ORMDL2Q53FV1 153 aa9.63□□□□□ -0.87
VAT1-205ENST00000587173 FAM104AQ969W3 186 aa9.62□□□□□ -0.87
VAT1-205ENST00000587173 RAB5BP61020 215 aa9.61□□□□□ -0.87
VAT1-205ENST00000587173 UNQ6190/PRO20217Q6UXQ8 127 aa9.61□□□□□ -0.87
VAT1-205ENST00000587173 FA2HQ7L5A8 372 aa9.61□□□□□ -0.87
VAT1-205ENST00000587173 PYGO1Q9Y3Y4 419 aa9.61□□□□□ -0.87
VAT1-205ENST00000587173 A0A087WZ39 114 aa9.6□□□□□ -0.87
VAT1-205ENST00000587173 TLX1NBP0CAT3 122 aa9.6□□□□□ -0.87
VAT1-205ENST00000587173 TRGC2P03986 189 aa9.59□□□□□ -0.87
VAT1-205ENST00000587173 GAGE2EQ4V326 116 aa9.59□□□□□ -0.87
VAT1-205ENST00000587173 C10orf25Q5T742 122 aa9.59□□□□□ -0.87
VAT1-205ENST00000587173 DIRC1Q969H9 104 aa9.59□□□□□ -0.87
VAT1-205ENST00000587173 GAGE2DQ9UEU5 116 aa9.59□□□□□ -0.87
VAT1-205ENST00000587173 LINC01549A6NIU2 74 aa9.58□□□□□ -0.88
VAT1-205ENST00000587173 IGLV7-43P04211 117 aa9.58□□□□□ -0.88
VAT1-205ENST00000587173 C18orf32Q8TCD1 76 aa9.58□□□□□ -0.88
VAT1-205ENST00000587173 TMEM141Q96I45 108 aa9.58□□□□□ -0.88
VAT1-205ENST00000587173 C6orf48Q9UBA6 75 aa9.58□□□□□ -0.88
VAT1-205ENST00000587173 CYSLTR1Q9Y271 337 aa9.58□□□□□ -0.88
VAT1-205ENST00000587173 IGLV4-3A0A075B6K6 122 aa9.57□□□□□ -0.88
VAT1-205ENST00000587173 LINC00242Q5T6M2 205 aa9.57□□□□□ -0.88
VAT1-205ENST00000587173 TEX43Q6ZNM6 134 aa9.57□□□□□ -0.88
VAT1-205ENST00000587173 PACRGQ96M98 296 aaPredicted RBP9.57□□□□□ -0.88
VAT1-205ENST00000587173 C2orf88Q9BSF0 95 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms